SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07990
Pre Gene Modal
BGIBMGA001143
Annotation
PREDICTED:_protein_PF14_0175-like_isoform_X2_[Papilio_xuthus]
Location
Bomo_Chr13(-):12040272-12044953      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.542
 

Sequence

CDS
ATGTGGAATTGGCACGTAAAAGTGAGGAAACTCAACGATTTACAAGGAGTGATTTTGTTGGTGTTCGCGACACTACCGCTGATAGCATCGACGAATATCGACTGCCTTGGAAAAGCTTTTCATTGTGTTAATTCGACTCATTTCATGATATGTGTGGATATCGGCGCAGGGTTTTCAAGTACGATTGATGATTTCGTTATACCGTGCCCTCCTACAACAGTTTGCCAACAAAATAATCGATTTGAGTGTGAATTTCCACCTATCACGACACCTGCACCGACGTTACCGACAGTTAGTTATGTTAAAGAAAGCATCCAATGGCTCGATCCCACAAATCCGACCCACGAAAATATTATTCGATCAACACAGCTCGACACAACGATAAACGAAGCTTACAATACCATCAGCACAACAACCATAGCAAATCTTGAAAACGACAACGAAATCACTACACGAGCGTTGGAAAAATATCCATTAGGATCAAGTGCTACGAAAGATTTTTTTTGGAATACTTCTCCAACGCTGGATGAAACAACTAGTCATTATAAAGAAAAACGGGAAAGCGTTTCAACAAATCCTCTAACGGACTCAACTACGGAAGCTATACCGGAAAAATCGACGCTTAGTGTACAAAAAGAAACAACGGATGATAGTTTCATCGCAACTACTAGCCTACAAAATGAAAACATTCCTGCCGTAATTTCCACGCCGCTTTCTAGTGTGAATGACCCAATTGCAACATCAAGTTTCCAAACAACAGAGAAAAATATAAAATTATCGACAAAAGCGGAGTCTGAATATGTAAGCTATAAGCCAACGTATTTATCAAACTTAGTTTCTACAATGGAACCTGCTACCGAATATTATACATCGAATGACAATACTCAAACACCCAGAACTCAATATTTACCGATTACAACTTCAACAGATAGCGTTTACACAACTGCACCTACCATTGTAACAACGATAGCACAATTTATAGAAACATCTGCAATCACAAGTAACGTTTTGAATGATAGCAACAAAATAAATAGTGAAAATTCGGATATAAAGTCAACGACCAAAGCTTTTCAAGTACAATCTACGCTTGATACAAATAAAGAAAATACTCATGATGAAATTACTACTCCTGAAGTTAGTCTAAGTGTAAACCAAAACATTCGACCTGCGGTCTCTGTCACTAATCATGTAATTCCAACTGATTCAAGTTATGTTTCGACTTTAGCTGCTGGTTCTACTAATGACGATAAATTGATTACCGGTATTTCTACCGAATCATTGTCTGTTACTGATAAAATTATATTGGAAGGCAATCATAAACAGTTTAATGACGTCATTCCAATTATTACATATACTACGACAAGTGACGCTTTTGCATCCAAACCTATGACTGAAATTGATTATTCTAGTATGACGGAATCAAGTTTAAAAATTAGAGCAGATGACGAAATCAACCCGATTGCAAATGAGGTCACTACTATAATGGATAGTATTTTAGTAGAAAAAACGAAATCTACAGCTTATGTAATGGACGATGTAATAAGTTCCACCACAACGGAAGATTCGGTTTCTCAAATCATAAAAAGTCCCCTTATATTTGATAAATTGAATTCGACCGTATCGAATGTAAAAAGTTACATAGATTTTGCCGATACAACTACTGATAACAGCAATCTAAATTCAGTAAAAATAAGTGGTTCATCCGAACCTATTGTGATAACCACACCCAAATTGTCTACATCCATCGATGCTACCGATATTAAAAATCTAATTTCAATTGACTTTGACACAACAGTATACACAACTACAGAAAACACCTTATTTAAGGAAAAGCAGAAAGATAAGCTCAGTAACAGAATTTCAGCAGCAATTGTTCAAGCCGACGCACCATCATTTGAAACTATGGATACAACATCGTCTGTTCCAACGGATACCAGTACAACAGACAAATTCAATCCGTATGTTACTATATTGGACGAATCAAAAGCTTTTTCAACAGTTTCATTAAACAATGTTCCCACTGCGATTCCTTCAAGTATAAAGACAATAAATACAAATACTTCTACAACCGTATATAATTATACGGAGTCTACGACATCAAATGTGTTAAAAGCTCAGAGTTTGAAAACAATTGAAAATGATTTGGAACAGGAATCATCCGTTATTAAAAATAATAACTTACAAGTGCCTCCTCAACCAATCAATCAGTCCTGGAATACGACAGCAACATTTGTAACAAATTCTACTACTGCAAGTGAATTGGATACGGCTGGCATTGTTGTGACTACAGAAATAGCCACATTAACTTCATCACTGAGTAATTCACTAAAAAATGAATCTGCATTTGGTACGGAAAATGATTATTACCAAAAAAATATTGCAACGTTTGGACTAATTAATGCTGCACAGAAAGTGACAGAACTAGAACAAAGGACAAACGGTTTAGATGATGAAATTCAATCTACAACACCAACTATATTCAATGAAATTGAAAAACCGGTAACTGACACAATTCATTTTAATGAAGCGACGCAATCGTATACCAAATTATATAAGAAAGAAAATAAAACTAAATCAGAAATTAATGATACACCGATTCCGTTTTCTCTGACCAATAACAGTTTACCCGCTGGAAAATCGACTTTAAATAGTACGAGTGTGGGTCAGAGTACCTTAGACCAGTTGTCTTCTGATTACCCTGATGACCTTAAACAAGTAAATAATGTAGGAAGTGGGTTGAAAAACATGAACAGTGAAGCAGTTATACAAGAGAGTCAGATTACAACTTCACAAATAGTGTTCGATGAGGTGTTGGGGAAAGAATTAGTATTAGGAGCAGAACTATCAACCTTAATTGGTATCGAAAAACCTAACTTAATGCGCACGGTAGAGGATACCGGTGAATTACAGATTCAGAATTCCCTCAAGACAATACCACTTAGGTCATCACCGACATCAAGTCTGAAAATCGAGTCACCTGGGTTACCGTTGGTAGGTACTGTACGGGATTCTGAAATTAACGGGAAAATCTTAGAAGTCGCTAAAAATGATCCCGCAGCAGAAATTAGTAACCGAAAAAATTCAAAAGATGGAACTCCAACACTAAAAATTTTTGTAGATTCACAGCCAAAAGTTCGATTATATTCTGAGCCAACTGTAAGCTATTCTAAGAGTGAAGATCTAACTTTTTCACACTACACTGTTACAGAACCTTCTCAGAAAGTACAAGACTTTTTGAATAGTGCGGCAGTTATGGATAATATTGGAAACGAAGGACACAAACATGTTTCACTGCAAAAGAGTGATAGTGAATACAATTCTGTGCAGATTTATAAACAACCAGAATCAGTCTCTACCACACCCAGCATTTTGGACGATAGAAATTTCGATCAAATTTTATTGAATGATGAAAAAGTGGCTTCAACAATCTATCCAGATTTAAAAAAGGCCACAAAACTAGTAAAGGTAGCTGAGATTCCTAGTAAAGGGACACGAACAATTGATCTAGAAACTATCACCTATCTAGAAAATAAAGAGAATATTGCAAAAAGTGAACCGACTCCTCCTTCAAAAACGAATTACGAAGCCACGAGCCTAAACCAAAATATAGATGCCGTAATTGAAAATAATTCTAAACTGAAGTCGACCATAAAAACTCGTGTGAATGTGGAATCTAACAATAATAATGATGGCAGAGTGAACACACAAAAATTGAGTGACACAGAACAGACAATAGCATCAAAGGCTACTAATTCTTATAATCTAAAAAAAATAGAGGCAACCGTAAATCGTGAAAATAACAAAGATAAAACCGTTTCAACGATACTCAACTTATCATTCAATTGTCAATACAAGAGTAGAGGAAGATACGGTGATAACAAAGATTGTAGAAAGTTCTATATTTGCATAGGAAGAAAACAACCTATTACTGGAAGGTGCCCCGAAAACACAGTATTCAGTGAAGTAAGAAAACAATGCACAAAAAACTTATCATATTGCGTGAGAAATAATCGATTCATGTGTGTGTCAAAAGGCAGGTACATCGACATTAAAAATAATGACCTTTACTATATTTGTGTTAGAAACGGAAATAGAACATTTGTGAGATATACATTTCAATGTCAAAACGGTTATTATTTGAATAAAATTTTAGTTAGATGTTTACCAATCACAAGTTCTGATAATGTCTCCAAAATAGTGGTTACCAAAGTAAAGAAAGATAAGGAAAAACTAGCTATTAAAAAATCGGCTAAAAGCGAAAGCTCTAGAAAAAATAGCGATCAAAGTATCAACCAAAATAATTCTGGGGAATCTGATAAAAACAGTGAATTGATTGAGTCTGTATGTGATGATGTTGGAAAATATTCTGATCCAGATGATTGCAGAATATATTACATTTGTTATAAAAATGGAAAGTCTGAAATGAAAATTAAGAAGAAAAAGTGCGAAAGCGATGAGGTTTTCCATAAGAAGCAAAAAAGATGTGTTGACGCTGAAAGTTACGAATGTTCTACTAATTAA
Protein
MWNWHVKVRKLNDLQGVILLVFATLPLIASTNIDCLGKAFHCVNSTHFMICVDIGAGFSSTIDDFVIPCPPTTVCQQNNRFECEFPPITTPAPTLPTVSYVKESIQWLDPTNPTHENIIRSTQLDTTINEAYNTISTTTIANLENDNEITTRALEKYPLGSSATKDFFWNTSPTLDETTSHYKEKRESVSTNPLTDSTTEAIPEKSTLSVQKETTDDSFIATTSLQNENIPAVISTPLSSVNDPIATSSFQTTEKNIKLSTKAESEYVSYKPTYLSNLVSTMEPATEYYTSNDNTQTPRTQYLPITTSTDSVYTTAPTIVTTIAQFIETSAITSNVLNDSNKINSENSDIKSTTKAFQVQSTLDTNKENTHDEITTPEVSLSVNQNIRPAVSVTNHVIPTDSSYVSTLAAGSTNDDKLITGISTESLSVTDKIILEGNHKQFNDVIPIITYTTTSDAFASKPMTEIDYSSMTESSLKIRADDEINPIANEVTTIMDSILVEKTKSTAYVMDDVISSTTTEDSVSQIIKSPLIFDKLNSTVSNVKSYIDFADTTTDNSNLNSVKISGSSEPIVITTPKLSTSIDATDIKNLISIDFDTTVYTTTENTLFKEKQKDKLSNRISAAIVQADAPSFETMDTTSSVPTDTSTTDKFNPYVTILDESKAFSTVSLNNVPTAIPSSIKTINTNTSTTVYNYTESTTSNVLKAQSLKTIENDLEQESSVIKNNNLQVPPQPINQSWNTTATFVTNSTTASELDTAGIVVTTEIATLTSSLSNSLKNESAFGTENDYYQKNIATFGLINAAQKVTELEQRTNGLDDEIQSTTPTIFNEIEKPVTDTIHFNEATQSYTKLYKKENKTKSEINDTPIPFSLTNNSLPAGKSTLNSTSVGQSTLDQLSSDYPDDLKQVNNVGSGLKNMNSEAVIQESQITTSQIVFDEVLGKELVLGAELSTLIGIEKPNLMRTVEDTGELQIQNSLKTIPLRSSPTSSLKIESPGLPLVGTVRDSEINGKILEVAKNDPAAEISNRKNSKDGTPTLKIFVDSQPKVRLYSEPTVSYSKSEDLTFSHYTVTEPSQKVQDFLNSAAVMDNIGNEGHKHVSLQKSDSEYNSVQIYKQPESVSTTPSILDDRNFDQILLNDEKVASTIYPDLKKATKLVKVAEIPSKGTRTIDLETITYLENKENIAKSEPTPPSKTNYEATSLNQNIDAVIENNSKLKSTIKTRVNVESNNNNDGRVNTQKLSDTEQTIASKATNSYNLKKIEATVNRENNKDKTVSTILNLSFNCQYKSRGRYGDNKDCRKFYICIGRKQPITGRCPENTVFSEVRKQCTKNLSYCVRNNRFMCVSKGRYIDIKNNDLYYICVRNGNRTFVRYTFQCQNGYYLNKILVRCLPITSSDNVSKIVVTKVKKDKEKLAIKKSAKSESSRKNSDQSINQNNSGESDKNSELIESVCDDVGKYSDPDDCRIYYICYKNGKSEMKIKKKKCESDEVFHKKQKRCVDAESYECSTN

Summary

Uniprot
NA  
ProteinModelPortal
NA  

Ontologies

KEGG
101744127    no KO assigned | (RefSeq) hybrid signal transduction histidine kinase M-like
GO
GO:0005576   GO:0006030   GO:0008061   GO:0016020   GO:0022891   GO:0006427   GO:0006412   GO:0016876   GO:0043039  

Topology

SignalP
Position:   1 - 30,         Likelihood:  0.716161
 
 
Length:
1506
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9.73596
Exp number, first 60 AAs:
9.66246
Total prob of N-in:
0.43021
outside
1  -  1506
 
 

Population Genetic Test Statistics

Pi
145.740718
Theta
165.877284
Tajima's D
-0.421892
CLR
10.167676
CSRT
0.259237038148093
Interpretation
Uncertain
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