Silkworm Genome Informatics Database

Gene

KWMTBOMO07985

Pre Gene Modal

BGIBMGA001008

Annotation

Monocarboxylate_transporter_9_[Papilio_xuthus]

Location

Bomo_Chr13(+):11969384-11976467 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.956

CDS

ATGTCTAACGCACCTGCGTACAAGGTGCCTCCAGACGGAGGATACGGATGGGTCATCACATTCGCGTATGCTTTGAATAATGTAGTCGTTCTACCCCTCATTAGTAGCTTCGGTCTGGTGTTCCAAGAAGCGTTTGATGAGACGGGTTTGACTCCTACGCAAGGGACCTTAGTTATAATACTCAATCATAGTATTGGAATGTTGTTGTCGTTCTTTGGAGGACCATTACTACGACGGTTTGGATACCGAAAAGTAGCTGCCGTCGGGGCTATACTTATCTCTGCTGGACTCATATTAACGAGTTTAGCATCTAGTTTCTGGGTCTTCATTTTATCGTACAGTATTCTAAATTCAATGGGTGTAGCTTCAGTAATGGCTGCATTCACATTAGCAATTAATTCGTTCTTCAAGGAAAAACGAAGTAGAGCAATCGGTGTCGGCATGTCAGTCACAGGACTTGGAGCAATTTACATGCCACTGCTCATGAGTACTCTCATTTACGCGTACGGTTGGCGATATGCTGTATTAATATTGAGTGCAATTTGTCTTCACTCACTTTTAGCGGCATGTCTGCTAAGGCCTGCGAAATGGTACTTAAAAGACCCACCGCTCTCGGAAGAGCTTGTACCTCTAAACAAAGAGACTGATGTTGAACTTGTCAACGGTAGCATTACGTCTTCATTAAAAGGAATAGCTTCTTTGCATATGAATGATACGAAAGAAAACGGTGGAATTCCAATGAAAAGTTTTTCTATGGGATCACTGAACAGTAACTCAAGTTTGCAGTCAAGAAATGCTGTATCGCACCCTGATGTGCGTCCAAAGCAAAACGAAACACCACTAGCACAGGCGCGTTACAAATGGTGGGAATCACAAGAAAACTATAATGCTTTTCACGCATTCTTATTTAGGAATGGTTTTCGTGGCAGTAGCCATGGGATTTACAAAAGGAATACGTACTGTTTACATGAATTTGATAATCCCTTGCTACGTTCCACTGGAGAGACTGCCATTTGCTTCTGGGATACAAATGTTTTTCAATGGCATTATCATCGCTTCAATCGGATCGTTACTAGGTCGCATTCGTGA

Protein

MSNAPAYKVPPDGGYGWVITFAYALNNVVVLPLISSFGLVFQEAFDETGLTPTQGTLVIILNHSIGMLLSFFGGPLLRRFGYRKVAAVGAILISAGLILTSLASSFWVFILSYSILNSMGVASVMAAFTLAINSFFKEKRSRAIGVGMSVTGLGAIYMPLLMSTLIYAYGWRYAVLILSAICLHSLLAACLLRPAKWYLKDPPLSEELVPLNKETDVELVNGSITSSLKGIASLHMNDTKENGGIPMKSFSMGSLNSNSSLQSRNAVSHPDVRPKQNETPLAQARYKWWESQENYNAFHAFLFRNGFRGSSHGIYKRNTYCLHEFDNPLLRSTGETAICFWDTNVFQWHYHRFNRIVTRSHS

Uniprot

H9IUS8 A0A2A4JLY7 A0A212FNX2 A0A194Q8X4 A0A194R9K3 A0A0L7KMW4 + More
A0A2H1V1E8 A0A1B0DB12

Pubmed

19121390 22118469 26354079 26227816

EMBL

BABH01000566 NWSH01001018 PCG73095.1 AGBW02004200 OWR55441.1 KQ459299 + More
KPJ01864.1 KQ460761 KPJ12536.1 JTDY01008306 KOB64633.1 ODYU01000236 SOQ34668.1 AJVK01000601

Proteomes

UP000005204 UP000218220 UP000007151 UP000053268 UP000053240 UP000037510 + More
UP000092462

PRIDE

H9IUS8

Pfam

PF07690 MFS_1

Interpro

IPR036259   MFS_trans_sf        + More
IPR011701   MFS
IPR020846   MFS_dom

SUPFAM

SSF103473 SSF103473

CDD

cd06174 MFS

ProteinModelPortal

H9IUS8 A0A2A4JLY7 A0A212FNX2 A0A194Q8X4 A0A194R9K3 A0A0L7KMW4 + More
A0A2H1V1E8 A0A1B0DB12

PDB

3WDO E-value=0.00240874, Score=96

KEGG

101744848 no KO assigned | (RefSeq) monocarboxylate transporter 9-like

GO

GO:0055085 GO:0016021 GO:0005506 GO:0020037 GO:0016020 GO:0022891 GO:0006427 GO:0006412 GO:0016876 GO:0043039

Length:

362

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

133.75162

Exp number, first 60 AAs:

29.579

Total prob of N-in:

0.98985

POSSIBLE N-term signal

sequence

inside

1 - 12

TMhelix

13 - 35

outside

36 - 54

TMhelix

55 - 77

inside

78 - 88

TMhelix

89 - 111

outside

112 - 114

TMhelix

115 - 137

inside

138 - 143

TMhelix

144 - 166

outside

167 - 169

TMhelix

170 - 192

inside

193 - 362

Pi

204.232581

Theta

174.50877

Tajima's D

0.90284

CLR

0.801812

CSRT

0.631018449077546

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics