Silkworm Genome Informatics Database

Gene

KWMTBOMO07976

Pre Gene Modal

BGIBMGA001002

Annotation

achaete-scute-like_protein_ASE_[Bombyx_mori]

Location

Bomo_Chr13(+):11747229-11748923 View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear Reliability : 3.545

CDS

ATGAGCTCCATCGATATCGTAGTCTTCCGCAACGCGTCAGTCAACAAGGCCCAGATTCTTCAAGAAACCGTGAATAATTCCTTAAACATAACGAACAACGATCCCAATCAAAATGTGAGACGTGAAATTATAGTTTTAAGAAAAAAACAAAGGATCCAACCCGCCGATACCGTGTCTGTGCCTGCACTGATGCGAACCATTGAGCCATCCTCATCAAGCGTGCTAGCGAAAAAAGCAAGATACCGAGAAAATACGAGTTCGGATGAAACTGTGCGTACACCTACACCGCTAGCGGTCGCTCGACGGAATGCGCGGGAACGGAACAGAGTACGTCAAGTGAACGATGGATTTGCGGCTCTCCGGCGACACATACCCGAAGAAGTAGCCGCGGCGTTTGAGACGACTAACTCCAACAGAGGACCGAACAAAAAACTCAGTAAAGTGGAAACATTAAGAATGGCGGTCGAGTACATACGGAACTTGGAAAGTTTACTTAACATCGGCCATGCTGACAAAGAAAACACGTCTCGTTCCTGCATGGAATCATTCCCTTCGCCAGCATCATCGTCTCCGAGAGAAAACAGTCAAGAGAGGAGCTATTTCATGATTAGTTCGCCTGCCCTAGAAGAAGAGGAACTAGATGAAGATGAAATAGACGGACTACCTGGCTTACGTCAGCAGCAGTATGTCGACATTGCAGCCTCAGAAAATTTCCACTTAGTGTCTACGCCACATCTGTACGATGAAGAAGAAGGCCAACCTCTTACACCATCATCGGATTTACTGGTTCAAGATGAAGTAAATTCACATATCCTAGATGCACATTTTCAGTTTCCAAATTCCGCCGAACATTTCTCTGTAATACCCGAACAAAATTACCTGAGTGAAACGGAAGTGCCAGTCAGTGAAAGTGATTTTGAAATAAAATACGCGGATTCCCTTAATCAACACATCCAACAAAGCTTCAATGAAAACACTGATATACCTTTTGCTTTGAATCCGGATCTTATTCTTCCCGAAAACCAGTTCAAGTTCAAGGAAAGTGACAATAGTTCTTTCACGGAAAACGAAGATTTTTGTGAAGTTGAATTAAAAAAGGAACTTCCAGATATCCAAGTGACGCCCGAGGACAGAGAACAATTCGAAGAAACTCTAAAATGGTGGCAAGAGAAAACGAGACAAACCCGTCCTACGAAAACTCTTAATAAAAAATAA

Protein

MSSIDIVVFRNASVNKAQILQETVNNSLNITNNDPNQNVRREIIVLRKKQRIQPADTVSVPALMRTIEPSSSSVLAKKARYRENTSSDETVRTPTPLAVARRNARERNRVRQVNDGFAALRRHIPEEVAAAFETTNSNRGPNKKLSKVETLRMAVEYIRNLESLLNIGHADKENTSRSCMESFPSPASSSPRENSQERSYFMISSPALEEEELDEDEIDGLPGLRQQQYVDIAASENFHLVSTPHLYDEEEGQPLTPSSDLLVQDEVNSHILDAHFQFPNSAEHFSVIPEQNYLSETEVPVSESDFEIKYADSLNQHIQQSFNENTDIPFALNPDLILPENQFKFKESDNSSFTENEDFCEVELKKELPDIQVTPEDREQFEETLKWWQEKTRQTRPTKTLNKK

Uniprot

H9IUS2 A6N869 A0A194Q8L0 A0A194R4D9 A0A0H3UY52 A0A2A4IUV3 + More
A0A2H1VKQ1 A0A212ENH5 A0A0L7L1T3 A0A2J7RLP0

Pubmed

19121390 18321391 26354079 22118469 26227816

EMBL

BABH01000591 EF620929 ABR20841.1 KQ459299 KPJ01872.1 KQ460761 + More
KPJ12542.1 KJ466144 AIZ67915.1 NWSH01006268 PCG63545.1 ODYU01003085 SOQ41397.1 AGBW02013662 OWR43026.1 JTDY01003606 KOB69271.1 NEVH01002684 PNF41753.1

Proteomes

UP000005204 UP000053268 UP000053240 UP000218220 UP000007151 UP000037510 + More
UP000235965

PRIDE

H9IUS2 A6N869

Pfam

PF00010 HLH

Interpro

IPR011598   bHLH_dom        + More
IPR015660   MASH1/Ascl1a-like
IPR036638   HLH_DNA-bd_sf

SUPFAM

SSF47459 SSF47459

Gene 3D

4.10.280.10

CDD

cd00083 HLH

ProteinModelPortal

H9IUS2 A6N869 A0A194Q8L0 A0A194R4D9 A0A0H3UY52 A0A2A4IUV3 + More
A0A2H1VKQ1 A0A212ENH5 A0A0L7L1T3 A0A2J7RLP0

KEGG

100125605 K09067 achaete-scute complex protein | (RefSeq) Ase; achaete-scute-like protein ASE

GO

GO:0003677 GO:0046983 GO:0006357 GO:0005643 GO:0016616 GO:0016491 GO:0019752 GO:0006427 GO:0016020 GO:0006412 GO:0016876 GO:0043039

PANTHER

PTHR13935

Length:

404

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00843

outside

1 - 404

Pi

151.124924

Theta

175.736172

Tajima's D

-0.454903

CLR

0.653017

CSRT

0.249937503124844

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics