Gene

KWMTBOMO07972

Pre Gene Modal

BGIBMGA001149

Annotation

PREDICTED:_yellow-y_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):11382602-11392969      View in EpiBrowser

Full name

Protein yellow      

Location in the cell

Extracellular   Reliability : 1.341 Lysosomal   Reliability : 1.052

CDS

ATGGCAGCGAAGTTTTTAGTTTTCTGTGGGCTAGTCTCACTAGCATCAGCAACGATAAAGCTCCAAGAAATATTCTCGTGGAACGTGGTCGACTGGAACTACCCGGACCAGTTCTCGAAGCAGCAGGCTCTCAGGACTGGTGCTCTGATACCAGAGAACGCACTGCCCGTTGGTATCGAAAGGTGGAGGAACAAATTGTTCGTCAGCGTTCCTAGGTGGCGCTCAGGTATTCCAGCTACTTTGAATTACATTCCACTGGACGCTCCATATGAACCATCCCCGAAATTAACGCCCTACCCGAGCTTCGAAGGCAACGAATTAGGCAATTGTCAAACAGGACTGACTACTGTATACAGGGTCAAAGCAGACCAGTGTGATCGTCTTTGGGTATTAGACGTTGGCACTTATGGATACGACAACGTTACAAATGTGTGCCCGTACACGCTCAATGTATTTGACTTGAACACTGATCAAATCATCCGTAAATACGTGTTACGACCAGAAGACATTGTCTCTACGACTTTCATTGCCAACATCGCTCTCGATATCGGTACCAGCTGTGAGGACACCTTTGCCTACTTCTCCGATGAACTGGGCTATGGTCTTATCGCTTACTCGTGGGAACAGAACAAGTCATGGAGATTCAGCCACAGCTATTTCATGCCCGACCCTCTCGTCGGTGATTTCAATATCGCTGGCTTGAATTTCCAGTGGGGAGCTGAAGGTATCTTCGGCATCACGGCGTCTCCTATCGGTGCCGATGGTTACAGAACTCTGTACTTCTCACCTCTGAGCAGTCACACAGAATTTTCCGTGTCGACCCGTATCTTGAGAGACGAAACTAAAGTGAAAGGTTCCTACAAAGACTTCTCAGTTGTCGGAGTACGTGGTCCTGACGGTCATACGACAGCCAAAGTAATGGACGACTCCGGTGTCCAGCTTTTCAACTTGATCGACCAAAACGCTGTCGGCTGTTGGAGATCGTCCCTGCCCTACAAACCTCAAAATATCGGAATTGCCGATAAAGACGACGTTGGCCTTGTTTTCCCCGTAGACGTCAAAATTGATGATGAGAAAAATGTATGGGTTATGTCAGACCGTATGGCTGTATTCCTTGAAGCCGAATTGGACTATAGTGATATTAACTTCAGGGTTTATACTGCACCTTTAGATACCCTAATTCAAGGAACCGTTTGTGAAGCGCCATTGCCAGTGCTTCAGGCACAGCAAATACTTAAGCCACTCCAACCGATCAAGGCTCTTTCTCGAGCGAAACTCTACAATCATGGCCTGGGAGTAACAGCAACTCCTTTCTCTGAAGCCGTTGCGGTATACACACCAGGCTCAACGAAATCTGGACTGACAGGTTCTTATAGACAACCGATTATAAAGAACACTGCTCCTAAAGTTCAGAACTACATTTACATTCCGAAACAAACTTCATCCGCTTATACATCTGGTCAATTTACCAGGCCGAAAAGTACCAACAAGAATCCGTGGTGGAATAAAGCTACCAACTACAATTACGAAGTTTTTGAACCTTGA

Protein

MAAKFLVFCGLVSLASATIKLQEIFSWNVVDWNYPDQFSKQQALRTGALIPENALPVGIERWRNKLFVSVPRWRSGIPATLNYIPLDAPYEPSPKLTPYPSFEGNELGNCQTGLTTVYRVKADQCDRLWVLDVGTYGYDNVTNVCPYTLNVFDLNTDQIIRKYVLRPEDIVSTTFIANIALDIGTSCEDTFAYFSDELGYGLIAYSWEQNKSWRFSHSYFMPDPLVGDFNIAGLNFQWGAEGIFGITASPIGADGYRTLYFSPLSSHTEFSVSTRILRDETKVKGSYKDFSVVGVRGPDGHTTAKVMDDSGVQLFNLIDQNAVGCWRSSLPYKPQNIGIADKDDVGLVFPVDVKIDDEKNVWVMSDRMAVFLEAELDYSDINFRVYTAPLDTLIQGTVCEAPLPVLQAQQILKPLQPIKALSRAKLYNHGLGVTATPFSEAVAVYTPGSTKSGLTGSYRQPIIKNTAPKVQNYIYIPKQTSSAYTSGQFTRPKSTNKNPWWNKATNYNYEVFEP

Description

Controls the pigmentation pattern of the adult cuticle and larval mouth parts.

Similarity

Belongs to the major royal jelly protein family.

Keywords

Developmental protein   Glycoprotein   Secreted   Signal   Complete proteome   Reference proteome  

Feature

chain  Protein yellow

Uniprot

Q2F5U2   Q2HZG0   B7XDF3   D5LPU1   A0A2H1VMY1   A0A3S2NJ76   + More
F1AAM2   A0A2A4JIU3   F1AAM4   F1AAM3   A0A212ENF2   E3SWS8   E3SWR2   E3SWS1   A6P3A9   D5MRK7   A0A194R412   D5MRL3   T1PAY8   A0A220T7G5   A0A1I8PD19   A0A1I8MDU1   A0A1S4FEX1   Q174P5   A0A0L0BRB4   A0A182FIF9   A0A182WY34   A0A084VGN9   A0A182QUV6   A0A1B0FL56   A0A182RYV0   A0A034VRA9   A0A182P0L9   A0A182U2D4   Q7Q4T5   A0A182HMS9   A0A182W666   A0A0A1X7B2   A0A182XY99   A0A034VQG2   A0A023EU92   A0A023EUX6   W8BVB0   A0A0K8V8G9   A0A182MZX5   Q7Z0H2   A0A182MVC3   A0A0K8V0D5   A0A1J1HYD8   Q7Z0H1   A0A0L7L0J1   O02437   B4GXZ2   Q9GP71   W5JJC0   B4L5H4   B3P957   A0A0K8U388   Q9BI23   Q8ISG5   B4MAV3   A0A0M4EM04   A0A0K8UUV6   Q9BI18   A0A1W4V8Z9   B4JMG3   Q9BI17   Q9GP81   A0A3B0K3S6   A0A182JEM3   A0A336M888   B4PWK6   Q5IBN4   B4NEK5   Q86CU0   P62407   P62408   Q2HQ63   P09957   Q2HQ64   A0A1A9UUP9   A0A290GB02   B3MSD8   D1LZK9   Q9BI26   A0A232F963   A0A348AW37   K7J4F2   A0A1W4XLU4   A0A1B0CSF3   A0A195FRD4   A0A195DLW2   A0A026WL40   A0A195CDN7   A0A0N0U3V6   A0A154PKE8   E2AHA4   A0A158NAA7   A0A151X7L9   A0A195BKN3  

Pubmed

18854583    19121390    16884544    20656794    22118469    17628284    + More
26354079    28676649    25315136    17510324    26108605    24438588    25348373    12364791    14747013    17210077    25830018    25244985    24945155    24495485    26227816    9286677    11110911    17994087    11371593    20920257    23761445    12372246    15632085    17550304    15690032    12574518    16625197    16052739    3096713    10731132    12537572    10731137    18362917    20149870    19820115    28648823    29684519    20075255    24508170    30249741    20798317    21347285   

EMBL

BABH01000612    BABH01000613    DQ311331    JN977509    AB438999    ABD36275.1    + More
AFC87789.1    BAH11146.1    DQ358085    ABC96700.2    AB455227    BAH11152.1    GU953231    ADF43215.1    ODYU01003190    SOQ41614.1    RSAL01000074    RVE48929.1    GU063821    ADX87341.1    NWSH01001335    PCG71628.1    GU063823    ADX87343.1    GU063822    ADX87342.1    AGBW02013662    OWR43022.1    GU128925    ADD60421.1    GU128909    ADD60419.1    GU128918    ADD60420.1    AB195254    KQ459299    BAF73474.1    KPJ01876.1    AB525739    BAJ07589.1    KQ460761    KPJ12548.1    AB525745    BAJ07595.1    KA645897    AFP60526.1    KY979110    ASK51659.1    CH477407    EAT41553.1    JRES01001480    KNC22577.1    ATLV01013039    KE524836    KFB37133.1    AXCN02001347    CCAG010001360    CCAG010001361    GAKP01014607    JAC44345.1    AAAB01008963    EAA12085.4    APCN01004901    GBXI01007103    JAD07189.1    GAKP01014605    GAKP01014604    JAC44347.1    GAPW01001091    JAC12507.1    GAPW01000802    JAC12796.1    GAMC01009309    JAB97246.1    GDHF01017439    JAI34875.1    AY126435    AAM95333.1    AXCM01008880    GDHF01019927    JAI32387.1    CVRI01000036    CRK93112.1    AY126436    AAM95334.1    JTDY01003916    KOB68831.1    Y13909    AJ289811    AJ289787    AJ289788    AJ289789    AJ289790    AJ289791    AJ289792    AJ289793    AJ289794    AJ289795    AJ289796    AJ289797    AJ289798    AJ289799    AJ289800    AJ289801    AJ289802    AJ289803    AJ289804    AJ289805    AJ289806    AJ289807    AJ289808    AJ289809    AJ289810    CH479196    EDW27619.1    AJ289812    ADMH02001010    ETN64462.1    CH933811    EDW06433.1    CH954183    EDV45353.1    GDHF01031348    GDHF01011628    JAI20966.1    JAI40686.1    AJ300670    AY128944    AAN05081.1    CH940655    EDW66362.1    CP012528    ALC48634.1    GDHF01021953    JAI30361.1    AJ300666    CH379064    CH916371    EDV91906.1    AJ300671    AJ289813    OUUW01000016    SPP88854.1    UFQT01000677    SSX26476.1    CM000162    EDX00775.1    AY817623    AAW32907.1    CH964239    EDW82174.1    AY165561    AAP21580.1    AJ300668    AJ300669    AM181678    CAJ57654.1    X04427    AE014298    AL023873    AM181677    CAJ57653.1    KY221863    ATB56361.1    CH902622    EDV34693.1    GU111770    KQ971312    ACY71063.1    EEZ98347.1    AJ300667    CAC34734.1    NNAY01000659    OXU27142.1    LC369734    BBC81928.1    AJWK01025983    AJWK01025984    AJWK01025985    KQ981305    KYN43023.1    KQ980734    KYN13885.1    KK107167    QOIP01000010    EZA56386.1    RLU17554.1    KQ978009    KYM98173.1    KQ435878    KOX69921.1    KQ434946    KZC12322.1    GL439483    EFN67221.1    ADTU01010107    KQ982446    KYQ56372.1    KQ976455    KYM85203.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000007151    UP000053268    UP000053240    + More
UP000095300    UP000095301    UP000008820    UP000037069    UP000069272    UP000076407    UP000030765    UP000075886    UP000092444    UP000075900    UP000075885    UP000075902    UP000007062    UP000075840    UP000075920    UP000076408    UP000075884    UP000075883    UP000183832    UP000037510    UP000008744    UP000000673    UP000009192    UP000008711    UP000008792    UP000092553    UP000001819    UP000192221    UP000001070    UP000268350    UP000075880    UP000002282    UP000007798    UP000000803    UP000078200    UP000007801    UP000007266    UP000215335    UP000002358    UP000192223    UP000092461    UP000078541    UP000078492    UP000053097    UP000279307    UP000078542    UP000053105    UP000076502    UP000000311    UP000005205    UP000075809    UP000078540   

PRIDE

Q2F5U2    Q2HZG0    B7XDF3    Q9BI23    Q9BI18    Q9BI17    + More
P62408    P09957   

Pfam

PF03022   MRJP        + More
PF01490   Aa_trans

Interpro

IPR011042   6-blade_b-propeller_TolB-like        + More
IPR029846   Yellow       
IPR017996   Royal_jelly/protein_yellow       
IPR013057   AA_transpt_TM       

Gene 3D

2.120.10.30    

ProteinModelPortal

Q2F5U2   Q2HZG0   B7XDF3   D5LPU1   A0A2H1VMY1   A0A3S2NJ76   + More
F1AAM2   A0A2A4JIU3   F1AAM4   F1AAM3   A0A212ENF2   E3SWS8   E3SWR2   E3SWS1   A6P3A9   D5MRK7   A0A194R412   D5MRL3   T1PAY8   A0A220T7G5   A0A1I8PD19   A0A1I8MDU1   A0A1S4FEX1   Q174P5   A0A0L0BRB4   A0A182FIF9   A0A182WY34   A0A084VGN9   A0A182QUV6   A0A1B0FL56   A0A182RYV0   A0A034VRA9   A0A182P0L9   A0A182U2D4   Q7Q4T5   A0A182HMS9   A0A182W666   A0A0A1X7B2   A0A182XY99   A0A034VQG2   A0A023EU92   A0A023EUX6   W8BVB0   A0A0K8V8G9   A0A182MZX5   Q7Z0H2   A0A182MVC3   A0A0K8V0D5   A0A1J1HYD8   Q7Z0H1   A0A0L7L0J1   O02437   B4GXZ2   Q9GP71   W5JJC0   B4L5H4   B3P957   A0A0K8U388   Q9BI23   Q8ISG5   B4MAV3   A0A0M4EM04   A0A0K8UUV6   Q9BI18   A0A1W4V8Z9   B4JMG3   Q9BI17   Q9GP81   A0A3B0K3S6   A0A182JEM3   A0A336M888   B4PWK6   Q5IBN4   B4NEK5   Q86CU0   P62407   P62408   Q2HQ63   P09957   Q2HQ64   A0A1A9UUP9   A0A290GB02   B3MSD8   D1LZK9   Q9BI26   A0A232F963   A0A348AW37   K7J4F2   A0A1W4XLU4   A0A1B0CSF3   A0A195FRD4   A0A195DLW2   A0A026WL40   A0A195CDN7   A0A0N0U3V6   A0A154PKE8   E2AHA4   A0A158NAA7   A0A151X7L9   A0A195BKN3  

PDB

5YYL     E-value=1.33035e-39,     Score=411

KEGG

693005    no KO assigned | (RefSeq) Y-y, Y; yellow-y

GO

GO:0060179   GO:0042438   GO:0016021   GO:0005576   GO:0016853   GO:0048067   GO:0007275   GO:0048082   GO:0048066   GO:0006583   GO:0070451   GO:0048065   GO:0005737  

PANTHER

PTHR10009:SF14   PTHR10009  

Subcellular location

Secreted  

SignalP

Position:   1 - 17,         Likelihood:  0.916588

 

 

Length:

514

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.592389999999997

Exp number, first 60 AAs:

0.584279999999999

Total prob of N-in:

0.02894

outside

1  -  514

 

 

Pi

200.292091

Theta

196.083439

Tajima's D

-1.187135

CLR

0.307904

CSRT

0.106294685265737

Interpretation

Uncertain