Gene

KWMTBOMO07971

Pre Gene Modal

BGIBMGA001150

Annotation

PREDICTED:_proton-coupled_amino_acid_transporter_1-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr13(-):11366844-11381919      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.936

CDS

ATGGGGGACGTGAAAAAACAACCACACATTGATTATGATCCATTCGAACATCGTGAAGTTGAAAAACCGAACTCTGATGTACGATCAACTGCAAATTTAATAAAGGCCTCTTTAGGCACAGGAATACTTGCGGGACCTCTGGCCTTCTCAAATGCAGGTTGGGGCGTTGGTCTTATTGGAACACTTTTCATCGGTTTCTTGTGTACTCACTGCATACACATACTTGTGAAGACATCTCGAGGCTGTTGTAAAATCGAGAAGAAACCATTACTGGACTACGCGGAGACATGTCGGTCAGTTTTTGCTAACGGACCGAAGAGTGTGAGAAGGTTTGCTGGAGCTGCCAGCATTTTTGCAGAATTTGCTCTGTTATCCACATACGTCGGAGTATGCTGCATTTATACAGTACTTATATCGGATTCGATTAAACAGCTCGTAGACCACTACGTACCGTCTGTAACGATACCTGTAGAATATTACTGTTTGATACTGCTACTGCCTCTGTGCGTACTTTGTCAGATAAGATACTTAAAGTTTCTGGCTGTGTTTTCAATGATAGCCAATGTCTTACTCGTGGCCACATATGCAATATGTCTCTATTATATTTTCGGAGGTGGAATTTCGTTTGTCGATAAGAAAGTTGCTGGTGATCCGGCAAGATATCCAGCTTTTATTTCAACTGTAATATTTGCAATGGAAGGTATTGGAGTAGTGATGCCAGTTGAGAATTCAATGAAGAAACCGCAAAATTTCCTCGGATTTCCTAGTGTGTTGGTCGTAGCGATGTCGACTATTGTATTCCTGTACAGTACACTGGGTTTGTTCGGCTACTTTAGATATGGCGACGTTTTAAGAGGAACCATCACTTTAAATCTACCAACTGAGGAGTGGCCCGCGATATTCGCGAAGATCTTCATTGCGCTTTCAATATTCTTCACGTACCCTCTTCAGTTCTATGTAGTTATCGATATATTCACGAAATATACGAAGCATCACATCAAGGAGAACTACCAGAAGATGGCGCAGGTGGTCGCCAGAACCGTTGGCGTGACGTGCTGCGTCGGTATTGGAATAGCATTACCACTGCTAGAACAAATTATCAATATAGTCGGAGCGATTTTCTATTCGATTCTCGGTCTCGTGATTCCTGCTATCGTTGAAACAGTTTTCCGGTGGAACGACCTCGGAAAATTCAAATGGATTCTTTGGAAAAATGTCCTCATTCTTCTCTTCGGCCTCGGAAGTCTCGTGTCAGGATGCACCGTGACAATAATGGACATAATACAAGTACTCAAACAGAAAACTGAGTAA

Protein

MGDVKKQPHIDYDPFEHREVEKPNSDVRSTANLIKASLGTGILAGPLAFSNAGWGVGLIGTLFIGFLCTHCIHILVKTSRGCCKIEKKPLLDYAETCRSVFANGPKSVRRFAGAASIFAEFALLSTYVGVCCIYTVLISDSIKQLVDHYVPSVTIPVEYYCLILLLPLCVLCQIRYLKFLAVFSMIANVLLVATYAICLYYIFGGGISFVDKKVAGDPARYPAFISTVIFAMEGIGVVMPVENSMKKPQNFLGFPSVLVVAMSTIVFLYSTLGLFGYFRYGDVLRGTITLNLPTEEWPAIFAKIFIALSIFFTYPLQFYVVIDIFTKYTKHHIKENYQKMAQVVARTVGVTCCVGIGIALPLLEQIINIVGAIFYSILGLVIPAIVETVFRWNDLGKFKWILWKNVLILLFGLGSLVSGCTVTIMDIIQVLKQKTE

Cofactor

FAD

Uniprot

A0A2A4JJQ0   A0A194R4V9   A0A212ENJ6   S4PGT3   A0A194Q8L4   A0A2H1V1S3   + More
A0A194Q8M5   A0A2A4JI41   A0A2H1VMY1   A0A212ENE9   A0A212EWW9   A0A336MRI7   A0A2A4JJ72   A0A194PCR8   I4DJF9   A0A1L8DEN1   A0A212FJG4   A0A2M3YY91   A0A182Q0A8   W5JSE3   T1EA00   A0A182MBQ3   A0A182IP57   A0A2M4BME5   A0A182YAD2   A0A2M4A1D4   A0A2M4A0X7   A0A2M4A0Y6   A0A182USW0   A0A1S4H4R1   A0A182KV18   A0A1L8DEV4   A0A0M9A0S8   B0WV85   A0A1E1W5A1   A0A194PJ35   A0A194QKK0   Q17E30   A0A1B0CAN0   A0A194Q8Y9   A0A1Q3F2I9   H9IUB4   A0A0L7QKA8   A0A182RLT5   A0A1Y1LDI1   A0A212F4Y3   A0A182FPM2   A0A182UK13   A0A182K1E2   A0A1L8EGD4   A0A2A4JEW1   A0A182WXY0   A0A182WE65   A0A182I602   A0A1I8PFI4   W8BC78   A0A0M4EAI4   B3MCU4   T1PE56   I4DNP1   B4MPP1   A0A1E1WJX2   A0A1J1HGM7   A0A1E1WI99   A0A1E1W9Z5   A0A182NPB8   D3TMU6   A0A0L0BM39   A0A1B0A1Z2   A0A067RHJ6   A0A0T6AW13   A0A194PEI1   B4KSQ0   B4QDE8   Q7K2W3   B4HPM4   A0A1B0BDW6   A0A1W4VPX7   B4P566   B4LP82   B3NRX3   A0A0R1DWD8   A0A0Q5W221   A0A0K8UWL5   A0A1Y0AWR9   A0A194R9L9   A0A2J7PFJ4   A0A3B0JQL4   A0A1Y1K9F3   A0A154P1I3   A0A1Y1K9N8   A0A1A9WDD4   B4JVM3   A0A1A9Y2M9   V5GUW5   A0A1Y1LSA3   W8BH26   A0A212FDX9  

Pubmed

26354079    22118469    23622113    22651552    20920257    23761445    + More
25244985    20966253    17510324    19121390    28004739    24495485    17994087    18057021    25315136    20353571    26108605    24845553    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    28341416   

EMBL

NWSH01001335    PCG71630.1    KQ460761    KPJ12549.1    AGBW02013662    OWR43021.1    + More
GAIX01003512    JAA89048.1    KQ459299    KPJ01877.1    ODYU01000291    SOQ34787.1    KPJ01878.1    PCG71631.1    ODYU01003190    SOQ41614.1    OWR43020.1    AGBW02011868    OWR45996.1    UFQT01001035    SSX28568.1    PCG71634.1    KQ459606    KPI91091.1    AK401427    BAM18049.1    GFDF01009178    JAV04906.1    AGBW02008267    OWR53876.1    GGFM01000469    MBW21220.1    AXCN02001819    ADMH02000303    ETN67041.1    GAMD01000852    JAB00739.1    AXCM01002773    GGFJ01005061    MBW54202.1    GGFK01001241    MBW34562.1    GGFK01001081    MBW34402.1    GGFK01001091    MBW34412.1    GFDF01009177    JAV04907.1    KQ435775    KOX75035.1    DS232119    EDS35424.1    GDQN01008899    JAT82155.1    KPI91095.1    KQ461198    KPJ06088.1    CH477287    EAT44708.1    AJWK01004116    AJWK01004117    AJWK01004118    AJWK01004119    KPJ01879.1    GFDL01013271    JAV21774.1    BABH01001422    BABH01001423    KQ414957    KOC59052.1    GEZM01061537    JAV70400.1    AGBW02010286    OWR48805.1    GFDG01001017    JAV17782.1    NWSH01001829    PCG69980.1    APCN01003539    GAMC01010263    JAB96292.1    CP012524    ALC42096.1    CH902619    EDV37346.2    KPU76737.1    KA647011    AFP61640.1    AK403058    BAM19531.1    CH963849    EDW74080.1    GDQN01003847    JAT87207.1    CVRI01000004    CRK87157.1    GDQN01004339    JAT86715.1    GDQN01007289    JAT83765.1    EZ422748    ADD19024.1    JRES01001654    KNC21116.1    KK852631    KDR19825.1    LJIG01022698    KRT79188.1    KPI91099.1    CH933808    EDW10549.1    KRG05311.1    CM000362    CM002911    EDX06813.1    KMY93293.1    AE013599    AY060621    AAF58478.2    AAL28169.1    CH480816    EDW47608.1    JXJN01012713    CM000158    EDW90728.1    KRJ99410.1    CH940648    EDW60191.2    KRF79294.1    CH954179    EDV56275.1    KQS62807.1    KRJ99411.1    KQS62808.1    GDHF01021391    JAI30923.1    KY921805    ART29394.1    KPJ12551.1    NEVH01025657    PNF15087.1    OUUW01000001    SPP75939.1    GEZM01088603    JAV58073.1    KQ434784    KZC04990.1    GEZM01088602    JAV58074.1    CH916375    EDV98491.1    GALX01004443    JAB64023.1    GEZM01052528    JAV74456.1    GAMC01010262    GAMC01010261    JAB96293.1    AGBW02008991    OWR51959.1   

Proteomes

UP000218220    UP000053240    UP000007151    UP000053268    UP000075886    UP000000673    + More
UP000075883    UP000075880    UP000076408    UP000075903    UP000075882    UP000053105    UP000002320    UP000008820    UP000092461    UP000005204    UP000053825    UP000075900    UP000069272    UP000075902    UP000075881    UP000076407    UP000075920    UP000075840    UP000095300    UP000092553    UP000007801    UP000095301    UP000007798    UP000183832    UP000075884    UP000037069    UP000092445    UP000027135    UP000009192    UP000000304    UP000000803    UP000001292    UP000092460    UP000192221    UP000002282    UP000008792    UP000008711    UP000235965    UP000268350    UP000076502    UP000091820    UP000001070    UP000092443   

PRIDE

H9IUB4    Q7K2W3   

Pfam

PF01490   Aa_trans        + More
PF03022   MRJP
PF00970   FAD_binding_6
PF00175   NAD_binding_1

Interpro

IPR013057   AA_transpt_TM        + More
IPR029846   Yellow       
IPR011042   6-blade_b-propeller_TolB-like       
IPR017996   Royal_jelly/protein_yellow       
IPR001834   CBR-like       
IPR017938   Riboflavin_synthase-like_b-brl       
IPR001433   OxRdtase_FAD/NAD-bd       
IPR017927   FAD-bd_FR_type       
IPR008333   Cbr1-like_FAD-bd_dom       
IPR039261   FNR_nucleotide-bd       
IPR001709   Flavoprot_Pyr_Nucl_cyt_Rdtase       

SUPFAM

SSF52343   SSF52343        + More
SSF63380   SSF63380       

Gene 3D

2.120.10.30     3.40.50.80    

ProteinModelPortal

A0A2A4JJQ0   A0A194R4V9   A0A212ENJ6   S4PGT3   A0A194Q8L4   A0A2H1V1S3   + More
A0A194Q8M5   A0A2A4JI41   A0A2H1VMY1   A0A212ENE9   A0A212EWW9   A0A336MRI7   A0A2A4JJ72   A0A194PCR8   I4DJF9   A0A1L8DEN1   A0A212FJG4   A0A2M3YY91   A0A182Q0A8   W5JSE3   T1EA00   A0A182MBQ3   A0A182IP57   A0A2M4BME5   A0A182YAD2   A0A2M4A1D4   A0A2M4A0X7   A0A2M4A0Y6   A0A182USW0   A0A1S4H4R1   A0A182KV18   A0A1L8DEV4   A0A0M9A0S8   B0WV85   A0A1E1W5A1   A0A194PJ35   A0A194QKK0   Q17E30   A0A1B0CAN0   A0A194Q8Y9   A0A1Q3F2I9   H9IUB4   A0A0L7QKA8   A0A182RLT5   A0A1Y1LDI1   A0A212F4Y3   A0A182FPM2   A0A182UK13   A0A182K1E2   A0A1L8EGD4   A0A2A4JEW1   A0A182WXY0   A0A182WE65   A0A182I602   A0A1I8PFI4   W8BC78   A0A0M4EAI4   B3MCU4   T1PE56   I4DNP1   B4MPP1   A0A1E1WJX2   A0A1J1HGM7   A0A1E1WI99   A0A1E1W9Z5   A0A182NPB8   D3TMU6   A0A0L0BM39   A0A1B0A1Z2   A0A067RHJ6   A0A0T6AW13   A0A194PEI1   B4KSQ0   B4QDE8   Q7K2W3   B4HPM4   A0A1B0BDW6   A0A1W4VPX7   B4P566   B4LP82   B3NRX3   A0A0R1DWD8   A0A0Q5W221   A0A0K8UWL5   A0A1Y0AWR9   A0A194R9L9   A0A2J7PFJ4   A0A3B0JQL4   A0A1Y1K9F3   A0A154P1I3   A0A1Y1K9N8   A0A1A9WDD4   B4JVM3   A0A1A9Y2M9   V5GUW5   A0A1Y1LSA3   W8BH26   A0A212FDX9  

KEGG

101745674    K14209 solute carrier family 36 (proton-coupled amino acid transporter) | (RefSeq) proton-coupled am

GO

GO:0016021   GO:0060179   GO:0042438   GO:0016491   GO:0015171   GO:0003333  

PANTHER

PTHR10009:SF14   PTHR10009  

Length:

436

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

227.13645

Exp number, first 60 AAs:

12.90803

Total prob of N-in:

0.26536

POSSIBLE N-term signal

sequence

outside

1  -  53

TMhelix

54  -  76

inside

77  -  115

TMhelix

116  -  138

outside

139  -  147

TMhelix

148  -  170

inside

171  -  181

TMhelix

182  -  204

outside

205  -  218

TMhelix

219  -  241

inside

242  -  253

TMhelix

254  -  276

outside

277  -  299

TMhelix

300  -  322

inside

323  -  342

TMhelix

343  -  362

outside

363  -  365

TMhelix

366  -  385

inside

386  -  405

TMhelix

406  -  428

outside

429  -  436

 

 

Pi

197.929187

Theta

168.12109

Tajima's D

0.529749

CLR

0.679214

CSRT

0.524923753812309

Interpretation

Uncertain