Gene

KWMTBOMO07970

Pre Gene Modal

BGIBMGA001151

Annotation

PREDICTED:_proton-coupled_amino_acid_transporter_1-like_[Papilio_polytes]

Location

Bomo_Chr13(-):11351935-11358819      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.901

CDS

ATGAGTGGGAAGACTGTTAAGGAAGACGAATACAATCCGTATGAACATCGTAAAATCGAGAAGCCAAATTCAGATATCAGGTCATTAGCGAATCTGATTAAATCTTCGTTGGGCTCTGGCCTACTTGCTATGCCACTGGCTTTCTCCAATTCGGGCTGGGCAGTCGGCATTATTGGAACAATCGTCATTGCATTTGTTTGTGGACACTGTGTGCATATATTCGTGAAAACATCAAGAGGATGTTGCAAGCTCGTGCGACGACCTCTTCTAAGCTACTCGGAGACTTGCAAAGCTGCATTCGAGCATGGACCAAAGTCGTTACGACCTTTCGCTTTTGCTGCACAATTATTTTCCGAATTTGCCTTATTCTTCACCTACATCGGTGTTTGCTGTATTTTTACCGTTCTAATTGCTGATTCTTTAAAACAGTTGTTCGATGAATACGTCACTACAACAGTCCTGCCTGTGGAATATTATTGTTTAATCATACTCGTGCCACTTTGCCTGATGGTACAGATCAGGCACTTAAAATGGTTGGCACCGTTTTCATTTATAGCAAACATTCTACTGATTGCAACTTTCGTTATCTGCATGTACTATATATTTGGAGACGAAATTAATTTTACTGATAAAAGAATCTCAGGGGATCTGTCTAGACTCCCGGCTTTTTTGTCCACGGTTATATTTGCGATGGAAGGCATCGGAGTAGTGATGCCAGTTGAAAATACAATGAAAAAACCGCAGCATTTTCTAGGGTGCCCTAGTGTCCTCGTCGTAGCTATGTCAACTATCATGCTCATGTATTCTATTCTTGGCTTATTCGGCTACTTCAGATACGGAGATGTACTTAGAGGATCTATAACACTGAACCTACCTATTGACGACTGGCCAGCCGTGTGCGCTAAAACTTTTATAGCACTATCAATATTCTTTACATACCCACTTCACTTCTTTGTGGTACTAGATATATTCACCCGATATGCGGAACCACACATCAAGAAGGAGTATCGTAATTTTGCACAAATACTCGCCAGGACCTCTTGCGTTTGGATTTGTGGTGGAATAGGCATAGCATTGCCTATGCTGGAACAGATCATCAACATTGTCGGAGCACTGTTCTACTCCATACTGGGACTCATAATACCAGGTGTAATCGAGACAGTATTTAGATGGGAAGATCTGGGCAGATGGAATTGGATTTTTTGGAAAAATCTATTGATTGTCCTCTTTGGTGTCTGTTCTTTAGTATCAGGCTGTACTGTTAGTGTCATGGATATTATAAGTATTTTAAATAAAAAAACCATTTGA

Protein

MSGKTVKEDEYNPYEHRKIEKPNSDIRSLANLIKSSLGSGLLAMPLAFSNSGWAVGIIGTIVIAFVCGHCVHIFVKTSRGCCKLVRRPLLSYSETCKAAFEHGPKSLRPFAFAAQLFSEFALFFTYIGVCCIFTVLIADSLKQLFDEYVTTTVLPVEYYCLIILVPLCLMVQIRHLKWLAPFSFIANILLIATFVICMYYIFGDEINFTDKRISGDLSRLPAFLSTVIFAMEGIGVVMPVENTMKKPQHFLGCPSVLVVAMSTIMLMYSILGLFGYFRYGDVLRGSITLNLPIDDWPAVCAKTFIALSIFFTYPLHFFVVLDIFTRYAEPHIKKEYRNFAQILARTSCVWICGGIGIALPMLEQIINIVGALFYSILGLIIPGVIETVFRWEDLGRWNWIFWKNLLIVLFGVCSLVSGCTVSVMDIISILNKKTI

Cofactor

FAD

Uniprot

A0A2H1V1S3   A0A194R4V9   S4PGT3   A0A2A4JI41   A0A194Q8M5   A0A2A4JJQ0   + More
A0A194Q8L4   A0A212ENJ6   A0A212ENE9   A0A2H1VMY1   A0A212FJG4   A0A194PCR8   I4DJF9   A0A182Q0A8   A0A212EWW9   A0A2A4JJ72   A0A182IP57   W5JSE3   A0A182USW0   A0A1S4H4R1   A0A182KV18   A0A182MBQ3   A0A1E1W5A1   T1EA00   A0A2M4A0X7   A0A2M3YY91   A0A2M4A0Y6   A0A2M4BME5   A0A182YAD2   A0A2M4A1D4   B0WV85   A0A336MRI7   H9IUB4   A0A1Q3F2I9   A0A1L8DEN1   A0A1B0CAN0   Q17E30   A0A194PJ35   A0A194Q8Y9   A0A194QKK0   A0A2A4JEW1   A0A212F4Y3   A0A182UK13   A0A0M9A0S8   A0A182RLT5   A0A1L8DEV4   A0A182K1E2   A0A182WXY0   W8BC78   A0A182I602   A0A182WE65   A0A182FPM2   T1PE56   A0A1Y1LDI1   A0A1I8PFI4   A0A0L7QKA8   A0A182NPB8   A0A1E1WJX2   B4KSQ0   A0A1E1WI99   A0A1L8EGD4   A0A1E1W9Z5   A0A0L0BM39   D3TMU6   W8BH26   A0A1B0A1Z2   A0A0T6AW13   A0A0K8UWL5   B3NRX3   B4MPP1   A0A1W4VPX7   A0A034VK49   B4P566   H9IVL9   A0A2J7PFJ4   I4DNP1   B3MCU4   A0A0Q5W221   A0A0R1DWD8   A0A3B0JQL4   A0A1B0BDW6   Q7K2W3   A0A0M4EAI4   B4QDE8   B4GBL8   Q293E9   B4HPM4   A0A194R9L9   A0A1J1HGM7   A0A212FDX9   A0A194PEI1   B4LP82   A0A067RHJ6   A0A1Y1LSA3   A0A3S2N8W7   A0A1Y1K9F3   A0A1Y1K9N8   B4JVM3  

Pubmed

26354079    23622113    22118469    22651552    20920257    23761445    + More
20966253    25244985    19121390    17510324    24495485    25315136    28004739    17994087    18057021    26108605    20353571    25348373    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    15632085    23185243    24845553   

EMBL

ODYU01000291    SOQ34787.1    KQ460761    KPJ12549.1    GAIX01003512    JAA89048.1    + More
NWSH01001335    PCG71631.1    KQ459299    KPJ01878.1    PCG71630.1    KPJ01877.1    AGBW02013662    OWR43021.1    OWR43020.1    ODYU01003190    SOQ41614.1    AGBW02008267    OWR53876.1    KQ459606    KPI91091.1    AK401427    BAM18049.1    AXCN02001819    AGBW02011868    OWR45996.1    PCG71634.1    ADMH02000303    ETN67041.1    AXCM01002773    GDQN01008899    JAT82155.1    GAMD01000852    JAB00739.1    GGFK01001081    MBW34402.1    GGFM01000469    MBW21220.1    GGFK01001091    MBW34412.1    GGFJ01005061    MBW54202.1    GGFK01001241    MBW34562.1    DS232119    EDS35424.1    UFQT01001035    SSX28568.1    BABH01001422    BABH01001423    GFDL01013271    JAV21774.1    GFDF01009178    JAV04906.1    AJWK01004116    AJWK01004117    AJWK01004118    AJWK01004119    CH477287    EAT44708.1    KPI91095.1    KPJ01879.1    KQ461198    KPJ06088.1    NWSH01001829    PCG69980.1    AGBW02010286    OWR48805.1    KQ435775    KOX75035.1    GFDF01009177    JAV04907.1    GAMC01010263    JAB96292.1    APCN01003539    KA647011    AFP61640.1    GEZM01061537    JAV70400.1    KQ414957    KOC59052.1    GDQN01003847    JAT87207.1    CH933808    EDW10549.1    KRG05311.1    GDQN01004339    JAT86715.1    GFDG01001017    JAV17782.1    GDQN01007289    JAT83765.1    JRES01001654    KNC21116.1    EZ422748    ADD19024.1    GAMC01010262    GAMC01010261    JAB96293.1    LJIG01022698    KRT79188.1    GDHF01021391    JAI30923.1    CH954179    EDV56275.1    KQS62807.1    CH963849    EDW74080.1    GAKP01016792    GAKP01016790    JAC42160.1    CM000158    EDW90728.1    KRJ99410.1    BABH01001445    BABH01001446    BABH01001447    NEVH01025657    PNF15087.1    AK403058    BAM19531.1    CH902619    EDV37346.2    KPU76737.1    KQS62808.1    KRJ99411.1    OUUW01000001    SPP75939.1    JXJN01012713    AE013599    AY060621    AAF58478.2    AAL28169.1    CP012524    ALC42096.1    CM000362    CM002911    EDX06813.1    KMY93293.1    CH479181    EDW31313.1    CM000071    EAL24662.1    KRT01443.1    CH480816    EDW47608.1    KPJ12551.1    CVRI01000004    CRK87157.1    AGBW02008991    OWR51959.1    KPI91099.1    CH940648    EDW60191.2    KRF79294.1    KK852631    KDR19825.1    GEZM01052528    JAV74456.1    RSAL01000191    RVE44648.1    GEZM01088603    JAV58073.1    GEZM01088602    JAV58074.1    CH916375    EDV98491.1   

Proteomes

UP000053240    UP000218220    UP000053268    UP000007151    UP000075886    UP000075880    + More
UP000000673    UP000075903    UP000075882    UP000075883    UP000076408    UP000002320    UP000005204    UP000092461    UP000008820    UP000075902    UP000053105    UP000075900    UP000075881    UP000076407    UP000075840    UP000075920    UP000069272    UP000095301    UP000095300    UP000053825    UP000075884    UP000009192    UP000037069    UP000092445    UP000008711    UP000007798    UP000192221    UP000002282    UP000235965    UP000007801    UP000268350    UP000092460    UP000000803    UP000092553    UP000000304    UP000008744    UP000001819    UP000001292    UP000183832    UP000008792    UP000027135    UP000283053    UP000001070   

PRIDE

H9IUB4    H9IVL9    Q7K2W3   

Pfam

PF01490   Aa_trans        + More
PF03022   MRJP
PF00970   FAD_binding_6
PF00175   NAD_binding_1

Interpro

IPR013057   AA_transpt_TM        + More
IPR029846   Yellow       
IPR011042   6-blade_b-propeller_TolB-like       
IPR017996   Royal_jelly/protein_yellow       
IPR001834   CBR-like       
IPR017938   Riboflavin_synthase-like_b-brl       
IPR001433   OxRdtase_FAD/NAD-bd       
IPR017927   FAD-bd_FR_type       
IPR008333   Cbr1-like_FAD-bd_dom       
IPR039261   FNR_nucleotide-bd       
IPR001709   Flavoprot_Pyr_Nucl_cyt_Rdtase       

SUPFAM

SSF52343   SSF52343        + More
SSF63380   SSF63380       

Gene 3D

2.120.10.30     3.40.50.80    

ProteinModelPortal

A0A2H1V1S3   A0A194R4V9   S4PGT3   A0A2A4JI41   A0A194Q8M5   A0A2A4JJQ0   + More
A0A194Q8L4   A0A212ENJ6   A0A212ENE9   A0A2H1VMY1   A0A212FJG4   A0A194PCR8   I4DJF9   A0A182Q0A8   A0A212EWW9   A0A2A4JJ72   A0A182IP57   W5JSE3   A0A182USW0   A0A1S4H4R1   A0A182KV18   A0A182MBQ3   A0A1E1W5A1   T1EA00   A0A2M4A0X7   A0A2M3YY91   A0A2M4A0Y6   A0A2M4BME5   A0A182YAD2   A0A2M4A1D4   B0WV85   A0A336MRI7   H9IUB4   A0A1Q3F2I9   A0A1L8DEN1   A0A1B0CAN0   Q17E30   A0A194PJ35   A0A194Q8Y9   A0A194QKK0   A0A2A4JEW1   A0A212F4Y3   A0A182UK13   A0A0M9A0S8   A0A182RLT5   A0A1L8DEV4   A0A182K1E2   A0A182WXY0   W8BC78   A0A182I602   A0A182WE65   A0A182FPM2   T1PE56   A0A1Y1LDI1   A0A1I8PFI4   A0A0L7QKA8   A0A182NPB8   A0A1E1WJX2   B4KSQ0   A0A1E1WI99   A0A1L8EGD4   A0A1E1W9Z5   A0A0L0BM39   D3TMU6   W8BH26   A0A1B0A1Z2   A0A0T6AW13   A0A0K8UWL5   B3NRX3   B4MPP1   A0A1W4VPX7   A0A034VK49   B4P566   H9IVL9   A0A2J7PFJ4   I4DNP1   B3MCU4   A0A0Q5W221   A0A0R1DWD8   A0A3B0JQL4   A0A1B0BDW6   Q7K2W3   A0A0M4EAI4   B4QDE8   B4GBL8   Q293E9   B4HPM4   A0A194R9L9   A0A1J1HGM7   A0A212FDX9   A0A194PEI1   B4LP82   A0A067RHJ6   A0A1Y1LSA3   A0A3S2N8W7   A0A1Y1K9F3   A0A1Y1K9N8   B4JVM3  

KEGG

101745823    K14209 solute carrier family 36 (proton-coupled amino acid transporter) | (RefSeq) proton-coupled am

GO

GO:0016021   GO:0060179   GO:0042438   GO:0016491   GO:0015171   GO:0003333  

PANTHER

PTHR10009:SF14   PTHR10009  

Length:

435

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

224.3489

Exp number, first 60 AAs:

14.68599

Total prob of N-in:

0.29058

POSSIBLE N-term signal

sequence

outside

1  -  52

TMhelix

53  -  75

inside

76  -  115

TMhelix

116  -  138

outside

139  -  147

TMhelix

148  -  170

inside

171  -  182

TMhelix

183  -  202

outside

203  -  221

TMhelix

222  -  244

inside

245  -  256

TMhelix

257  -  279

outside

280  -  298

TMhelix

299  -  321

inside

322  -  341

TMhelix

342  -  361

outside

362  -  364

TMhelix

365  -  384

inside

385  -  404

TMhelix

405  -  427

outside

428  -  435

 

 

Pi

229.040852

Theta

185.930798

Tajima's D

0.54073

CLR

0.130741

CSRT

0.526923653817309

Interpretation

Uncertain