SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07967
Annotation
gustatory_receptor_46?_partial_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.95
 

Sequence

CDS
ATGATAACTATGAAGTCTCCAGAGTATCTATCAAAAGATATTTTAGATGAGGACTTCGTTCGGGTTTTTCGTTTTCCATTTTTGGTGCAAATGGCGCTAGGATCATGCAGAGTCCACTTGAAAGCCAGATTCATTACTATACCGACGCTCGGTCAAAAACTTTACACTGTAATGAGCATAATAATTTGTTCTTTGTTGTATTTTAATATCACGAAGCTTTATCTACCTCTATATTACCAACACAGTATCGTGTACTATCTTTTTTTGGCTGTGACTGGTTTGGATCAATTATCTTTTTTTGCAAATTTAATTCATGTGCGATTTCTTAATGGGGAAACTAATACTGCATTCTGCATCATGATGCAGAGAATTGATCGCAATATGAAGATTGATCACAACAACATTTTGAACAAAACGGTTATTCGAGCTAATATATTTACGATTACGTTCATTATATTAATTTACGTTGTCCTTGTAATATCAACGATAATGTTGAATGAATACTCACTGGTTACTTTATTTGGATTGTTGTACGGTCAATTAATATTTATGGTCGAAATGGCGCACTGTTCAAATCTAATTCTATTTTTCTTTACACGGGTTCGTTTTGTGAATGCTATAATAAAAAATCATGTTCATCCGGAAAATCAAAATCAACCACCGAAACTTGTAAGGTACTTTGTAACTAATAGAATTACGAGGTACCTCGCTGCACAAACACATGACTTCATCGTAAACGACACAGATGTTTATTTGAAGCAAATATTCGAAGGATTTTCGATGTTTACCGATATTTATAGATTTCAGGTATGCCTCTTTTGCATAAAGATAGTTGTATTGAGCCTGCTAACCTTCGAACTCTGCTTCGTTGCGGTACAAAGAAATCTTTTAGAAACAAAGAATTTAACAAACTATTATATTATGACATATTCAGTTATTGGATTTTTCACTGCGTTGTATGTAAGCGGACGCTGTGAATTGTTCTTCAGAGAAATACGAGAGACTAAGCGTTTGGCCGTTGCTGTCCTGTTGCAATATCAAGAAGGTACCATACTTACATAG
Protein
MITMKSPEYLSKDILDEDFVRVFRFPFLVQMALGSCRVHLKARFITIPTLGQKLYTVMSIIICSLLYFNITKLYLPLYYQHSIVYYLFLAVTGLDQLSFFANLIHVRFLNGETNTAFCIMMQRIDRNMKIDHNNILNKTVIRANIFTITFIILIYVVLVISTIMLNEYSLVTLFGLLYGQLIFMVEMAHCSNLILFFFTRVRFVNAIIKNHVHPENQNQPPKLVRYFVTNRITRYLAAQTHDFIVNDTDVYLKQIFEGFSMFTDIYRFQVCLFCIKIVVLSLLTFELCFVAVQRNLLETKNLTNYYIMTYSVIGFFTALYVSGRCELFFREIRETKRLAVAVLLQYQEGTILT

Summary

Ontologies

Topology

Length:
353
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
135.73039
Exp number, first 60 AAs:
11.66549
Total prob of N-in:
0.80101
POSSIBLE N-term signal
sequence
inside
1  -  45
TMhelix
46  -  68
outside
69  -  82
TMhelix
83  -  105
inside
106  -  143
TMhelix
144  -  166
outside
167  -  175
TMhelix
176  -  198
inside
199  -  269
TMhelix
270  -  292
outside
293  -  306
TMhelix
307  -  329
inside
330  -  353
 
 

Population Genetic Test Statistics

Pi
273.081148
Theta
195.257353
Tajima's D
0.562386
CLR
0.431291
CSRT
0.524623768811559
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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