Gene

KWMTBOMO07939

Pre Gene Modal

BGIBMGA000983

Annotation

PREDICTED:_TWiK_family_of_potassium_channels_protein_7_[Bombyx_mori]

Location

Bomo_Chr13(+):10535247-10549881      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.616

CDS

ATGTGTAAAAATGAGAAGAACGTGTCATGGGAGACGGAGGCACTTATGGGTGCAAAGCCTGAATCGAGATGGAGCAATTTCTGTCCAAGAGAAGCCTTGTCCCATGTTGGGTTATTCGTTGCGTTAATGCTGTACACAGCTGGCGGCGGATTGGTATTCCGTGCGTTAGAGTATCCAGCTGAAATGGCTAAACAGGATTTTCATAGGGAACGTGTTCTAAGTGAAAGATGGAATTTAATACGTTTTGTAGCTCAATGGACAAACGGGACTGAGTATTTTAATGGCGTTGAAGAGCTGCTAAGCCATCATTTAGCTATTTACGAAAAGGTGTTAGAAGAAGCGTCATCAGATGGCATATCGTTGGAAGTAGAAAAGAATTTTCCACCAACCGAAGAAAGATGGAGCATTTTGCAAGCTGTATTTTTTTCTTCAACAGTGCTCACTACTATAGGTTACGGTAACATAGTGCCGGTAACATTTTGGGGAAGGTTGTTTTGTATCGCTTACGCCTTGATAGGAATACCATTCACATTAACGGTCATCGCTGATCTAGGCAGAGTTTTCGCCACATGTGTTTCCTTTATCGCTAAACATCTACCGTCACCACCTAGTAAGTTAACATGA

Protein

MCKNEKNVSWETEALMGAKPESRWSNFCPREALSHVGLFVALMLYTAGGGLVFRALEYPAEMAKQDFHRERVLSERWNLIRFVAQWTNGTEYFNGVEELLSHHLAIYEKVLEEASSDGISLEVEKNFPPTEERWSILQAVFFSSTVLTTIGYGNIVPVTFWGRLFCIAYALIGIPFTLTVIADLGRVFATCVSFIAKHLPSPPSKLT

Similarity

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.

Uniprot

A0A2H1VT12   A0A3S2LVT4   H9IUQ3   A0A2W1BYK4   A0A2A4J5D2   A0A0N0PDK3   + More
A0A194Q8P4   A0A1I8N2A9   A0A0Q9WN14   B4L1K4   Q29HS6   B4GYD9   Q9VYY5   B4IK18   B4R343   B4PYA6   W8AP75   A0A0L0CKA9   B4MSC4   B3NUD1   A0A3B0KEY0   A0A1W4V1W9   B4M355   A0A0K8W0C5   B3MWJ0   A0A0A1WJD1   A0A084VQ45   U5EEQ4   A0A034WRL0   A0A182FMB5   A0A182YH38   W5JI18   Q17DS8   B0XGP9   A0A0M3QZ46   A0A139WIX4   E2B1X3   A0A0K8U275   A0A1Y1KR28   A0A1A9VBQ4   A0A1B0G8B4   A0A1A9Z634   A0A1B0EXA1   A0A182PUM2   U4UHK3   A0A182JKC3   N6UUV7   A0A1A9XXQ9   A0A1B0APF7   A0A182MF40   A0A0L7RDT6   Q7Q822   A7UTI7   A0A182I658   A0A154P4Y7   A0A182W5Z7   A0A088AIB6   A0A2A3ELB4   A0A232F9I3   A0A310S628   A0A0M9A8K7   A0A067QW29   A0A182RVW7   A0A1J1HR05   A0A088ATV4   A0A195CEI0   A0A336KAZ3   A0A0P5I3V3   A0A0P4ZF17   A0A0P5NGR5   A0A0P5APG8   A0A0P5KRQ2   A0A0A9YQN9   A0A0A9XKG5   A0A146M548   A0A0P5SIA8   A0A0A9XF06   A0A0P5KW34   A0A0A9XQD1   A0A0P4YBJ1   A0A0N8B2D2   A0A0P5LTL6   A0A0P5JVA9   A0A0P5JI11   A0A0P6EVF7   A0A0P5T429   A0A0P5VSX9   A0A0P5RLL0   A0A0P5QMF1   A0A0P4XT46   A0A0P5GA70   A0A0P6F080   A0A0P5G0I6   A0A0P5DU13   A0A0P6I569   A0A0P6BV24   A0A0P5WD21   A0A0L7KQ02  

Pubmed

19121390    28756777    26354079    25315136    17994087    15632085    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    24495485    26108605    25830018    24438588    25348373    25244985    20920257    23761445    17510324    18362917    19820115    20798317    28004739    23537049    12364791    28648823    24845553    25401762    26823975    26227816   

EMBL

ODYU01004270    SOQ43963.1    RSAL01000173    RVE45076.1    BABH01000681    KZ149944    + More
PZC76853.1    NWSH01002968    PCG67181.1    KQ460202    KPJ17174.1    KQ459299    KPJ01907.1    CH933810    KRF94126.1    EDW07640.2    CH379064    EAL31681.3    CH479197    EDW27795.1    AE014298    AAF48048.2    CH480851    EDW51390.1    CM000366    EDX17645.1    CM000162    EDX01968.1    GAMC01018733    JAB87822.1    JRES01000290    KNC32695.1    CH963851    EDW75013.2    CH954180    EDV46046.1    OUUW01000011    SPP86880.1    CH940651    EDW65230.2    GDHF01007701    JAI44613.1    CH902625    EDV34975.2    GBXI01015531    GBXI01001155    JAC98760.1    JAD13137.1    ATLV01015123    KE525003    KFB40089.1    GANO01004214    JAB55657.1    GAKP01001965    JAC56987.1    ADMH02001125    ETN64032.1    CH477291    EAT44586.1    DS233053    EDS27772.1    CP012528    ALC48793.1    KQ971338    KYB27940.1    GL444981    EFN60329.1    GDHF01031698    JAI20616.1    GEZM01078763    JAV62630.1    CCAG010000229    AJVK01001016    AJVK01001017    KB632168    ERL89345.1    APGK01011346    APGK01011347    APGK01011348    APGK01011349    APGK01011350    APGK01011351    KB738451    ENN82602.1    JXJN01001399    AXCM01010835    KQ414614    KOC68896.1    AAAB01008948    EAA10378.2    EDO63978.1    APCN01007519    KQ434820    KZC06989.1    KZ288222    PBC32062.1    NNAY01000589    OXU27524.1    KQ768821    OAD53064.1    KQ435720    KOX78676.1    KK852878    KDR14501.1    CVRI01000019    CRK90411.1    KQ977873    KYM99115.1    UFQS01000116    UFQT01000116    SSW99953.1    SSX20333.1    GDIQ01218405    JAK33320.1    GDIP01213575    JAJ09827.1    GDIQ01145533    JAL06193.1    GDIP01196340    JAJ27062.1    GDIQ01180663    JAK71062.1    GBHO01009663    JAG33941.1    GBHO01024296    JAG19308.1    GDHC01003755    JAQ14874.1    GDIP01139549    JAL64165.1    GBHO01024292    JAG19312.1    GDIQ01179258    JAK72467.1    GBHO01024294    JAG19310.1    GDIP01229887    JAI93514.1    GDIQ01219603    JAK32122.1    GDIQ01165434    JAK86291.1    GDIQ01198408    JAK53317.1    GDIQ01199709    JAK52016.1    GDIQ01064758    JAN29979.1    GDIP01133636    JAL70078.1    GDIP01095804    JAM07911.1    GDIQ01099996    JAL51730.1    GDIQ01115197    JAL36529.1    GDIP01236936    JAI86465.1    GDIQ01251349    JAK00376.1    GDIQ01067606    JAN27131.1    GDIQ01248431    JAK03294.1    GDIP01151597    JAJ71805.1    GDIQ01011177    JAN83560.1    GDIP01010429    JAM93286.1    GDIP01087804    JAM15911.1    JTDY01007475    KOB65170.1   

Proteomes

UP000283053    UP000005204    UP000218220    UP000053240    UP000053268    UP000095301    + More
UP000009192    UP000001819    UP000008744    UP000000803    UP000001292    UP000000304    UP000002282    UP000037069    UP000007798    UP000008711    UP000268350    UP000192221    UP000008792    UP000007801    UP000030765    UP000069272    UP000076408    UP000000673    UP000008820    UP000002320    UP000092553    UP000007266    UP000000311    UP000078200    UP000092444    UP000092445    UP000092462    UP000075885    UP000030742    UP000075880    UP000019118    UP000092443    UP000092460    UP000075883    UP000053825    UP000007062    UP000075840    UP000076502    UP000075920    UP000005203    UP000242457    UP000215335    UP000053105    UP000027135    UP000075900    UP000183832    UP000078542    UP000037510   

PRIDE

H9IUQ3    Q9VYY5   

Pfam

PF07885   Ion_trans_2        + More
PF00069   Pkinase
PF00067   p450

Interpro

IPR013099   K_chnl_dom        + More
IPR003092   2pore_dom_K_chnl_TASK       
IPR003280   2pore_dom_K_chnl       
IPR000719   Prot_kinase_dom       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR000961   AGC-kinase_C       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR002401   Cyt_P450_E_grp-I       
IPR036396   Cyt_P450_sf       
IPR017441   Protein_kinase_ATP_BS       

SUPFAM

SSF56112   SSF56112        + More
SSF48264   SSF48264       

Gene 3D

1.10.630.10    

ProteinModelPortal

A0A2H1VT12   A0A3S2LVT4   H9IUQ3   A0A2W1BYK4   A0A2A4J5D2   A0A0N0PDK3   + More
A0A194Q8P4   A0A1I8N2A9   A0A0Q9WN14   B4L1K4   Q29HS6   B4GYD9   Q9VYY5   B4IK18   B4R343   B4PYA6   W8AP75   A0A0L0CKA9   B4MSC4   B3NUD1   A0A3B0KEY0   A0A1W4V1W9   B4M355   A0A0K8W0C5   B3MWJ0   A0A0A1WJD1   A0A084VQ45   U5EEQ4   A0A034WRL0   A0A182FMB5   A0A182YH38   W5JI18   Q17DS8   B0XGP9   A0A0M3QZ46   A0A139WIX4   E2B1X3   A0A0K8U275   A0A1Y1KR28   A0A1A9VBQ4   A0A1B0G8B4   A0A1A9Z634   A0A1B0EXA1   A0A182PUM2   U4UHK3   A0A182JKC3   N6UUV7   A0A1A9XXQ9   A0A1B0APF7   A0A182MF40   A0A0L7RDT6   Q7Q822   A7UTI7   A0A182I658   A0A154P4Y7   A0A182W5Z7   A0A088AIB6   A0A2A3ELB4   A0A232F9I3   A0A310S628   A0A0M9A8K7   A0A067QW29   A0A182RVW7   A0A1J1HR05   A0A088ATV4   A0A195CEI0   A0A336KAZ3   A0A0P5I3V3   A0A0P4ZF17   A0A0P5NGR5   A0A0P5APG8   A0A0P5KRQ2   A0A0A9YQN9   A0A0A9XKG5   A0A146M548   A0A0P5SIA8   A0A0A9XF06   A0A0P5KW34   A0A0A9XQD1   A0A0P4YBJ1   A0A0N8B2D2   A0A0P5LTL6   A0A0P5JVA9   A0A0P5JI11   A0A0P6EVF7   A0A0P5T429   A0A0P5VSX9   A0A0P5RLL0   A0A0P5QMF1   A0A0P4XT46   A0A0P5GA70   A0A0P6F080   A0A0P5G0I6   A0A0P5DU13   A0A0P6I569   A0A0P6BV24   A0A0P5WD21   A0A0L7KQ02  

PDB

4XDL     E-value=2.78462e-13,     Score=179

KEGG

101744128    K05323 potassium channel subfamily K, invertebrate | (RefSeq) TWiK family of potassium channels prot

GO

GO:0016021   GO:0005267   GO:0006811   GO:0004672   GO:0005524   GO:0004674   GO:0071805   GO:0022841   GO:0005887   GO:0030322   GO:0020037   GO:0016705   GO:0005506  

Length:

207

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

65.67168

Exp number, first 60 AAs:

21.98407

Total prob of N-in:

0.79205

POSSIBLE N-term signal

sequence

inside

1  -  32

TMhelix

33  -  55

outside

56  -  135

TMhelix

136  -  158

inside

159  -  159

TMhelix

160  -  182

outside

183  -  207

 

 

Pi

217.33987

Theta

153.692472

Tajima's D

-0.914025

CLR

1.500358

CSRT

0.15609219539023

Interpretation

Uncertain