Gene

KWMTBOMO07934

Annotation

PREDICTED:_gamma-tubulin_complex_component_2-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr13(+):10453117-10458188      View in EpiBrowser

Full name

Gamma-tubulin complex component       + More
Gamma-tubulin complex component 2 homolog      

Alternative Name

Gamma-ring complex protein 84 kDa

Location in the cell

Extracellular   Reliability : 2.766

CDS

ATGAGTTTTACGAATAAATTTCAGGTGCACAACGTTGATGAAGTGTTGGAGAGGCACAATGACTTCCTCGAATCCTGCCTCGGGGACTGCATGCTCACTAATCCTCAACTGTTGAAGGCTGTCACCACGCTCTGTCTCGTTTGCGTCCAGTTCTGCAGTTTCATACAGGAGGCAGGTTGCGGGACCACTACGAGCAGCTCGGCGGACTCATTCTCTCGTTCTGTGTCGCGGTACGGGCTTCGATTCACGGCGGCACTTCTCTCCGTGCTCGCTATAATCGATCGTAATGCACGCGACAACAACACGAACAAACTCCTCAACATATCCGCCAGATTGAATTTCAACACTTATTACGCGAAGCAACTTGAAAAGTTTTGCTCTGATGACAAACTTCTGGACTGTGAGAAGAAAACGCCGTCCTCCTAG

Protein

MSFTNKFQVHNVDEVLERHNDFLESCLGDCMLTNPQLLKAVTTLCLVCVQFCSFIQEAGCGTTTSSSADSFSRSVSRYGLRFTAALLSVLAIIDRNARDNNTNKLLNISARLNFNTYYAKQLEKFCSDDKLLDCEKKTPSS

Description

Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome.

Subunit

Gamma-tubulin small complex (Gamma TuSC) is a heterotetrameric complex which contains two molecules of gamma-tubulin, and one molecule each of Dgrip84 and Dgrip91. The gamma-tubulin in this complex binds preferentially to GDP over GTP.

Similarity

Belongs to the TUBGCP family.

Keywords

Alternative splicing   Complete proteome   Cytoplasm   Cytoskeleton   Direct protein sequencing   Microtubule   Phosphoprotein   Reference proteome  

Feature

chain  Gamma-tubulin complex component 2 homolog
splice variant  In isoform 2.

Uniprot

A0A2H1VKZ0   A0A2A4J4X6   A0A2A4J696   A0A212EZL8   A0A2W1BUG7   A0A194QA90   + More
A0A3S2NUS6   A0A0L7KTL8   A0A2J7PCE5   A0A2J7PCF9   A0A2P8Y7R0   A0A187GBR9   A0A2J7PCE4   A0A0A1XS79   A0A0A1WM46   A0A067QYV0   A0A0A1WF42   W8B8N2   A0A034W254   A0A0K8VC34   A0A0K8U1N3   A0A0K8UQ43   A0A0K8V489   A0A1W4VVE2   A0A1A9VWY4   A0A1A9Z3W0   A0A1I8NA16   A0A2M4BEW0   A0A1A9W9K4   A0A0P4WIJ5   A0A0R3P5S0   A0A1I8PP14   A0A1Q3G1T4   A0A2M4AHX1   A0A2M4AHX5   A0A0Q5T4B1   A0A2M3Z798   A0A2M4BDP6   A0A2M3Z7H8   A0A2M4BDN9   A0A0Q9WDN2   A0A0Q9XF36   Q16HU3   W5JU97   W8BFW3   A0A3B0KWP9   A0A3B0KMD8   A0A0A1WYP6   A0A0R1EAT5   A0A1A9WFR2   A0A0K8W6D2   A0A034W3R9   A0A1B0G596   A0A1W4VHA8   E1JJQ3   A0A0L0BRN3   Q9XYP7-2   X2JG40   A0A1I8NA10   A0A1I8NA08   A0A2B4RSY1   B4NCC7   A0A0T6B308   D2A387   A0A3F2YSR6   Q7Q703   A0A1Q3G1T0   A0A3B0J9L1   A0A3R7M2R8   A0A1Y1NJV3   A0A084WKN6   Q29G36   B4GW52   A0A182PHG5   A0A1B6FY55   A0A182M1W1   A0A336MC89   A0A2R9BTL5   A0A182HDF5   Q16HU4   A0A1B6IKE5   B3NVP5   G5AVB2   A0A091E667   B4PZH1   A0A182Y143   A0A026WSN5   A0A232EUY2   A0A151IHY4   K7IYU5   A0A1J1HG27   F4WNM3   A0A0M3QTM0   A0A195B7L9   A0A158NUW2   A0A195FV78  

Pubmed

22118469    28756777    26354079    26227816    29403074    25830018    + More
24845553    24495485    25348373    25315136    15632085    17994087    17510324    20920257    23761445    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26108605    10037793    12537569    17372656    18362917    19820115    12364791    28004739    24438588    22722832    26483478    21993625    25244985    24508170    28648823    20075255    21719571    21347285   

EMBL

ODYU01003123    SOQ41485.1    NWSH01002968    PCG67197.1    PCG67198.1    AGBW02011255    + More
OWR46930.1    KZ149944    PZC76847.1    KQ459299    KPJ01915.1    RSAL01000173    RVE45081.1    JTDY01006012    KOB66374.1    NEVH01027059    PNF14009.1    PNF14012.1    PYGN01000836    PSN40194.1    KR733678    AKS04550.1    PNF14010.1    GBXI01000537    JAD13755.1    GBXI01014819    JAC99472.1    KK852868    KDR14696.1    GBXI01016770    JAC97521.1    GAMC01008935    JAB97620.1    GAKP01010198    JAC48754.1    GDHF01015917    JAI36397.1    GDHF01031692    JAI20622.1    GDHF01023613    JAI28701.1    GDHF01018633    JAI33681.1    GGFJ01002449    MBW51590.1    GDRN01030756    JAI67539.1    CH379064    KRT07119.1    GFDL01001285    JAV33760.1    GGFK01007050    MBW40371.1    GGFK01007059    MBW40380.1    CH954180    KQS30093.1    GGFM01003630    MBW24381.1    GGFJ01002024    MBW51165.1    GGFM01003710    MBW24461.1    GGFJ01002025    MBW51166.1    CH940655    KRF82554.1    CH933812    KRG07147.1    CH478141    EAT33821.1    ADMH02000350    ETN66868.1    GAMC01008933    JAB97622.1    OUUW01000031    SPP89791.1    SPP89790.1    GBXI01010759    JAD03533.1    CM000162    KRK06576.1    GDHF01005874    JAI46440.1    GAKP01010197    JAC48755.1    CCAG010022616    AE014298    ACZ95332.1    JRES01001467    KNC22653.1    AF118379    AY061148    AHN59914.1    LSMT01000338    PFX19929.1    CH964239    EDW82486.1    LJIG01016094    KRT81633.1    KQ971338    EFA02278.2    APCN01004264    AAAB01008960    EAA11766.4    GFDL01001281    JAV33764.1    OUUW01000002    SPP77053.1    QCYY01002451    ROT70212.1    GEZM01001085    GEZM01001084    JAV98171.1    ATLV01024126    KE525349    KFB50780.1    EAL32274.1    CH479193    EDW26897.1    GECZ01014644    JAS55125.1    AXCM01006421    UFQT01000888    SSX27846.1    AJFE02055016    AJFE02055017    AJFE02055018    AJFE02055019    JXUM01034315    JXUM01034316    JXUM01034317    KQ561019    KXJ80013.1    EAT33820.1    GECU01020320    JAS87386.1    EDV46710.2    JH167069    EHB00973.1    KN120575    KFO38223.1    EDX02127.1    KK107109    EZA59060.1    NNAY01002072    OXU22162.1    KQ977545    KYN02030.1    CVRI01000002    CRK86952.1    GL888237    EGI64216.1    CP012523    ALC39119.1    KQ976565    KYM80511.1    ADTU01002869    KQ981215    KYN44545.1   

Proteomes

UP000218220    UP000007151    UP000053268    UP000283053    UP000037510    UP000235965    + More
UP000245037    UP000027135    UP000192221    UP000078200    UP000092445    UP000095301    UP000091820    UP000001819    UP000095300    UP000008711    UP000008792    UP000009192    UP000008820    UP000000673    UP000268350    UP000002282    UP000092444    UP000000803    UP000037069    UP000225706    UP000007798    UP000007266    UP000075840    UP000007062    UP000283509    UP000030765    UP000008744    UP000075885    UP000075883    UP000240080    UP000069940    UP000249989    UP000006813    UP000028990    UP000076408    UP000053097    UP000215335    UP000078542    UP000002358    UP000183832    UP000007755    UP000092553    UP000078540    UP000005205    UP000078541   

PRIDE

E1JJQ3    Q9XYP7   

Pfam

PF17681   GCP_N_terminal        + More
PF04130   GCP_C_terminal

Interpro

IPR040457   GCP_C        + More
IPR042241   GCP_C_sf       
IPR041470   GCP_N       
IPR007259   GCP       

Gene 3D

1.20.120.1900    

ProteinModelPortal

A0A2H1VKZ0   A0A2A4J4X6   A0A2A4J696   A0A212EZL8   A0A2W1BUG7   A0A194QA90   + More
A0A3S2NUS6   A0A0L7KTL8   A0A2J7PCE5   A0A2J7PCF9   A0A2P8Y7R0   A0A187GBR9   A0A2J7PCE4   A0A0A1XS79   A0A0A1WM46   A0A067QYV0   A0A0A1WF42   W8B8N2   A0A034W254   A0A0K8VC34   A0A0K8U1N3   A0A0K8UQ43   A0A0K8V489   A0A1W4VVE2   A0A1A9VWY4   A0A1A9Z3W0   A0A1I8NA16   A0A2M4BEW0   A0A1A9W9K4   A0A0P4WIJ5   A0A0R3P5S0   A0A1I8PP14   A0A1Q3G1T4   A0A2M4AHX1   A0A2M4AHX5   A0A0Q5T4B1   A0A2M3Z798   A0A2M4BDP6   A0A2M3Z7H8   A0A2M4BDN9   A0A0Q9WDN2   A0A0Q9XF36   Q16HU3   W5JU97   W8BFW3   A0A3B0KWP9   A0A3B0KMD8   A0A0A1WYP6   A0A0R1EAT5   A0A1A9WFR2   A0A0K8W6D2   A0A034W3R9   A0A1B0G596   A0A1W4VHA8   E1JJQ3   A0A0L0BRN3   Q9XYP7-2   X2JG40   A0A1I8NA10   A0A1I8NA08   A0A2B4RSY1   B4NCC7   A0A0T6B308   D2A387   A0A3F2YSR6   Q7Q703   A0A1Q3G1T0   A0A3B0J9L1   A0A3R7M2R8   A0A1Y1NJV3   A0A084WKN6   Q29G36   B4GW52   A0A182PHG5   A0A1B6FY55   A0A182M1W1   A0A336MC89   A0A2R9BTL5   A0A182HDF5   Q16HU4   A0A1B6IKE5   B3NVP5   G5AVB2   A0A091E667   B4PZH1   A0A182Y143   A0A026WSN5   A0A232EUY2   A0A151IHY4   K7IYU5   A0A1J1HG27   F4WNM3   A0A0M3QTM0   A0A195B7L9   A0A158NUW2   A0A195FV78  

KEGG

101736809    K16569 gamma-tubulin complex component 2 | (RefSeq) gamma-tubulin complex component 2-like

GO

GO:0007020   GO:0005874   GO:0000922   GO:0043015   GO:0005737   GO:0005815   GO:0007283   GO:0008017   GO:0000278   GO:0008275   GO:0007017   GO:0051225   GO:0030953   GO:0005875   GO:0051726   GO:0007098   GO:0051321   GO:0000923   GO:0031122   GO:0000930   GO:0005813   GO:0051415  

PANTHER

PTHR19302  

Subcellular location

  

Length:

141

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.57619

Exp number, first 60 AAs:

0.48837

Total prob of N-in:

0.21399

outside

1  -  141

 

 

Pi

138.289276

Theta

158.534417

Tajima's D

-1.121619

CLR

236.969328

CSRT

0.11704414779261

Interpretation

Uncertain