SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07933  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001166
Annotation
transient_receptor_potential_cation_channel_protein_painless_[Bombyx_mori]
Full name
Transient receptor potential cation channel protein painless      
Location in the cell
PlasmaMembrane   Reliability : 2.476
 

Sequence

CDS
ATGTCACGTGATAATTACGAAATGAAGCCGAAGCAATTATCAAGAAACAGCTCTTTATTTGGAACCGATCCCCAAGAGCTGTTGAACAAGGCCCTTCAGAATAACGACTACGCGAAGTTCAAGAAACTCGTTACCGAAGCTAATGTTGATCTCGAACATGTTTATGAATATCCTGATTACAAAACATGCCTCGAAGTGGCTGTATCCGACAGAAACAAATTAGAATTCGTCAAATTACTATTACAATATCAAGTAGAAGTGAACAAAGTGAACGTTACACATTCTGCCGCACCCATACACTTTGCTGTCGAAAATGGCAACATAGACGCACTTGCGGCCCTTTTAGAAGACGACCGAATTGATGTTAACGTTAAAAGTAGGGGGAACACCGCGATATTGATGGCCGTCAAACAAATTGAAGAACTAGACGATGCCCGTGAACACGAATTAACAATATATGAAGATATGATTGAACTACTTCTAAAAGCTGGATGTAATGCAAATTCACCAGACCTTAAGGGTGTAACTCCTATTTATAGTGCAGCGAAACAAGGCCTAGAAAGAGTTATCACACTAATTATTGACTATGCAAAGCACGCTATTGACATAGACACGTACAAAGATAGAAGGGGTAAAACTGCTCGCGATTATTTAAAAGAAGCTTTCCCGTATCTAGAAGCAAAGTTTGATTCGACTACTCAAGACCCTGAAATTGTAGACTCTGATAAATTATTCTCATATTTAAGCAGACACGAAGAGGACAACTTTATAAGAGATTTTCTAAAACTTGCTAACAAAAACGAACATCGTAAAATATTGCCGGTCAACAATGGTATGAATACTATGTTACAACTAGCAACAGAGAAAGGTTTTGAAAAAGCAGTCAGTACTTTATTAAGATATGGGGCGGATCCTAACGCAACTTGTTCCAGTAATACGAGCAGACCGATTGCGTTGGCGTGTCAAAACGGATATTACAAAATTGTTAAAATGTTCATGGATAATGAGTCGACTTTGTTCGATCCAGTTAATTCGGAATCTCTAGTGCAAATTACTATAAAAGGAAGGCGCTCATCTATAAATATCCCTAATGTTAATTTTGATGAATGTTTGCGACTATTACTCAATCATCCTAAAATGGACATTAATGTTAATCATATGGATATGAAAAATAACACGGCCCTTCACTATGCTGCAAGAAACGGTGATAATAAAACTGTCCTGGAACTACTTAGAAACGGGGCTTGCATAGGATTGCGTAACTCGTTCGACGAACCACCACTCGCAGATATTAATGCTAAAACATTGGAAGCATTCTTGGATGAATGTGTCACAACGAACAACGAAAGACCAAGCAATGACGATTATGAAATACACATGAAATACAGTTTCCTAGTTTATCCAAATAATTCGCTAGAAAACGAACTTTGTAAAGTGCCATTAATCGACAATACTAACAATAACGTTAAAGAGTATGATACTATATTAGCACCCGAAACTGATGCTTTGTTATACATGACACGAAATGAAGAATTACGACCATTGCTAAAACACCCGGTGATAACAAGTTTTCTTTATTTAAAATGGCAAAGAATAAGCTGTCTTTTTTTTGCGAACATAACGTTTTATTCCTTTTTGTGGTTATGTTTAATTCTCTATATTATTTTGGGATACGGCGCTGAAAAGAAGCAACGAGACTCTTTTGAGGCGTTAAACGTTATCACACATGTCGGTGTTATTATTGGTGTGGTTTTGCTATTGATCAGGGAATTATTTCAACTTTTACTATCACCGACAAGATATTTACAGAGCATTGAAAATTGGATGGAAATCGGTCTTATTTTTGTGACGATTTGGATAGTGTTTTCTAAATCGGCTACAGAGTCGACGAAGCAGCAACTTTCAGCGGTTGCAATTTTGTTATCATCAGCCGAATTAGTTCTACTAATTGGACAGTTTCCGACACTGTCAACTAACATCGTCATGTTGAAAACGGTTTCGTGGAATTTCTTCAAATTTTTACTTTGGTATTGCATTCTCATAATAGCTTTTGCGTTAAGTTTCTACACACTATTCAGGCAAGAAAATGAAGAAGATCAGCGAGCACCAGACCCCAACACAGTCGGTAAAGAGGAGGAAGAAGAAGATTTCTTCGAAGATCCTGGTAGATCTTTATTTAAGACCATCGTCATGTTAACTGGAGAATTCGATGCATCTTCCATAAAATTCAGTACATATCCCTTAACGAGTCACATTATATTCATCGTGTTCGTTTTCATGATACCCATTGTGCTTTTTAATTTACTCAACGGTCTTGCGGTTAGTGACACACAAGAAATTAGGGCAGATGCCGAATTAGTAGGGCATATTTCTCGAATTAAACTTATTTCTTATATCGAGAGCGTGCTTATCGGTAGCGCGAAAACCCATTCACGACCATCAAAGTGTTGGTCGTTGCTGCCGTTCAACATTCAAAACTTAAATCTCATCAAACCTAAAACCTTTTTTACGAAATCCTTTGCAAAGAGGATTTGTTTGTTTCCCCATTTCCTGCCGAAATATAAAATACTTGTTAAACCAAATCAAAACAATATAATTGAGATACCGCACGCCGATGACAAAGACCTTGAAAGGAGCGGGGGGTGTTGTTTCGAGCGCTGTCAAAACTATAGGCTGGATCGTAAAATTGTCAAAAACGCAAAGCTAGTGATTAGTAATAAAACAAAGATAACCGAATTCGATGATAAGCTTTCGATGTACGAAAATAAAATTGAGAGTCTCGAGGCAACTCTGAAGAAAGTATTATTAGCCATTGAATCGCAACGCAATTAA
Protein
MSRDNYEMKPKQLSRNSSLFGTDPQELLNKALQNNDYAKFKKLVTEANVDLEHVYEYPDYKTCLEVAVSDRNKLEFVKLLLQYQVEVNKVNVTHSAAPIHFAVENGNIDALAALLEDDRIDVNVKSRGNTAILMAVKQIEELDDAREHELTIYEDMIELLLKAGCNANSPDLKGVTPIYSAAKQGLERVITLIIDYAKHAIDIDTYKDRRGKTARDYLKEAFPYLEAKFDSTTQDPEIVDSDKLFSYLSRHEEDNFIRDFLKLANKNEHRKILPVNNGMNTMLQLATEKGFEKAVSTLLRYGADPNATCSSNTSRPIALACQNGYYKIVKMFMDNESTLFDPVNSESLVQITIKGRRSSINIPNVNFDECLRLLLNHPKMDINVNHMDMKNNTALHYAARNGDNKTVLELLRNGACIGLRNSFDEPPLADINAKTLEAFLDECVTTNNERPSNDDYEIHMKYSFLVYPNNSLENELCKVPLIDNTNNNVKEYDTILAPETDALLYMTRNEELRPLLKHPVITSFLYLKWQRISCLFFANITFYSFLWLCLILYIILGYGAEKKQRDSFEALNVITHVGVIIGVVLLLIRELFQLLLSPTRYLQSIENWMEIGLIFVTIWIVFSKSATESTKQQLSAVAILLSSAELVLLIGQFPTLSTNIVMLKTVSWNFFKFLLWYCILIIAFALSFYTLFRQENEEDQRAPDPNTVGKEEEEEDFFEDPGRSLFKTIVMLTGEFDASSIKFSTYPLTSHIIFIVFVFMIPIVLFNLLNGLAVSDTQEIRADAELVGHISRIKLISYIESVLIGSAKTHSRPSKCWSLLPFNIQNLNLIKPKTFFTKSFAKRICLFPHFLPKYKILVKPNQNNIIEIPHADDKDLERSGGCCFERCQNYRLDRKIVKNAKLVISNKTKITEFDDKLSMYENKIESLEATLKKVLLAIESQRN

Summary

Description
Receptor-activated non-selective cation channel involved in detection of pain sensation due to high temperature. Involved in heat nociception by being activated by noxious temperature of 38 degrees Celsius.
Similarity
Belongs to the transient receptor (TC 1.A.4) family.
Keywords
ANK repeat   Complete proteome   Ion channel   Ion transport   Membrane   Reference proteome   Repeat   Sensory transduction   Transmembrane   Transmembrane helix   Transport  
Feature
chain  Transient receptor potential cation channel protein painless
EMBL
BABH01000690    AB264789    BAO53208.1    JTDY01005527    KOB66914.1    KQ459299    + More
KPJ01914.1    KQ460202    KPJ17180.1    KZ149944    PZC76848.1    NWSH01002968    PCG67200.1    AGBW02008583    OWR52996.1    ODYU01000763    SOQ36037.1    GEDC01024817    JAS12481.1    KX249693    AOR81470.1    GEBQ01023332    JAT16645.1    GECU01004017    JAT03690.1    GECZ01026128    JAS43641.1    PYGN01000189    PSN51663.1    NEVH01015683    PNF26761.1    PNF26762.1    KK852775    KDR16796.1    GFXV01000797    MBW12602.1    GEZM01041195    JAV80581.1    GEZM01041196    JAV80580.1    GGMR01019429    MBY32048.1    GGMS01015137    MBY84340.1    ABLF02020407    ACPB03006508    KU356754    GBHO01008520    GDHC01018488    APB88050.1    JAG35084.1    JAQ00141.1    GBRD01012159    JAG53665.1    GBBI01004091    JAC14621.1    GBYB01013010    GBYB01013011    GBYB01013012    JAG82777.1    JAG82778.1    JAG82779.1    GL451230    EFN79678.1    FX985591    BBF97924.1    KK852854    KDR14974.1    KK854155    PTY12279.1    PYGN01000377    PSN47403.1    QOIP01000008    RLU19517.1    NEVH01021939    PNF19162.1    KQ971338    EFA02836.1    LBMM01000695    KMQ97718.1    KK107109    EZA59059.1    KQ981215    KYN44544.1    AJVK01027446    KQ979074    KYN22759.1    KQ982316    KYQ57818.1    GL888237    EGI64217.1    KQ976565    KYM80512.1    GL439118    EFN67773.1    KQ977545    KYN02029.1    KQ435066    KZC14334.1    KU532290    ANT80565.1    KQ762962    OAD55186.1    KQ435728    KOX77755.1    KQ414648    KOC66313.1    NNAY01002072    OXU22161.1    GANO01000313    JAB59558.1    HACA01013224    CDW30585.1    CH477408    EAT41530.1    GEHC01000819    JAV46826.1    CH954179    EDV57095.1    CP012524    ALC41437.1    GDIQ01202002    JAK49723.1    GAMC01016088    JAB90467.1    KDR14973.1    GAKP01004881    JAC54071.1    GDHF01008199    JAI44115.1    JRES01001578    KNC21853.1    CM000158    EDW92627.1    CM000362    CM002911    EDX08639.1    KMY96473.1    GDIQ01029808    JAN64929.1    AY268106    AE013599    BT011483    GL732535    EFX84229.1    CH963846    EDW72407.1    HACA01014079    CDW31440.1    CH916367    EDW02406.1    CH902619    EDV37235.1    CH480838    EDW49283.1    CH940662    EDW58890.2    OUUW01000001    SPP74495.1    CH479181    EDW31560.1    DS231968    EDS29662.1    CM000071    EDY68761.1    GDRN01085983    JAI61269.1    GDIQ01031001    JAN63736.1    UFQT01002005    SSX32378.1    UFQT01000040    SSX18573.1    GDIP01165225    JAJ58177.1    LRGB01002451    KZS07610.1    GBXI01001396    JAD12896.1    GDIQ01136219    JAL15507.1    EAT41531.1    GDIQ01165709    JAK86016.1    AAAB01008799    EGK96204.1    APCN01001985   
Pfam
PF00520   Ion_trans        + More
PF12796   Ank_2
PF00023   Ank
PF13606   Ank_3
Interpro
IPR036770   Ankyrin_rpt-contain_sf        + More
IPR020683   Ankyrin_rpt-contain_dom       
IPR005821   Ion_trans_dom       
IPR002110   Ankyrin_rpt       
SUPFAM
SSF48403   SSF48403       
Gene 3D
PDB
6MOL     E-value=1.45762e-13,     Score=189

Ontologies

Topology

Subcellular location
Membrane  
Length:
943
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
126.78375
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00729
outside
1  -  534
TMhelix
535  -  557
inside
558  -  569
TMhelix
570  -  589
outside
590  -  603
TMhelix
604  -  623
inside
624  -  635
TMhelix
636  -  658
outside
659  -  672
TMhelix
673  -  692
inside
693  -  751
TMhelix
752  -  774
outside
775  -  943
 
 

Population Genetic Test Statistics

Pi
160.017589
Theta
163.085172
Tajima's D
-0.463291
CLR
1.042381
CSRT
0.247987600619969
Interpretation
Uncertain
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