Gene

KWMTBOMO07931

Pre Gene Modal

BGIBMGA001167

Annotation

PREDICTED:_transcription_factor_ETV6_[Amyelois_transitella]

Location

Bomo_Chr13(-):10323583-10326736      View in EpiBrowser

Transcription factor

ETS

Location in the cell

Nuclear   Reliability : 3.961

CDS

ATGAAAGTTGTAAGCTTACAACTGCCGTCTGGGCCCAGTATGGAGCGGCTACCGCTACCATTCAGTCCAACAGAACTATTATGGCGTTACCCACTACCCTGGGCGCCACCGCCTCCTTCACCGCTTGGTGACACCAAGGCGCAACTGCCAGCCGGTCTTCCGCCAGAACCAAGACTATGGACCAGAGAGGATGTTTCTGTATTTCTGAAATGGTGTGAAAGAGAATTCGATCTACCTAATTTTGATATGGACCTCTTTCAAATGAACGGTAAAGCATTATGCTTGCTTACTAAAACAGATTTGGGTGAAAGGTGTCCTGGAGCAGGCGATGTCTTACATAATGTTCTTCAAATGCTTGTACGCGACGCAGCGCTGTTAGGTAGAGTTCCTTCCTCACCTGTTACTCCCACCGCTCGTGCGGCACCGTATCCGCCCTCTCCCCACTCTCATCCACCGACACCAACTTGGACTGTTGATGGTTTCCACCATTTCCACAGCGCTGCAGCAGCAGCAGCAGCTCAACCTAATTCAGTGACTCTCAGTCCTGCTCCATCAGTTGATAGTTCTGGAAGTCCTCAAAGAGGAGACACTGTAACTTATGCGCCAGCGTATGCACCGTCCGTGCCCCCCACTACTCAAGCTGCCAGTTCCGGAAGTAATCATTCAGATTCCGATGAAGAGGGTCAATACGCTCCACCTCCACGTTCTCCTAAAGAAGCTCCAATAACGAGTCCAGCCCCGCAAAATCATCCAACACAACAACATCCTCATTACCGCGCTCAACATAGGGAATTTTTTCCAAATGATATGCCAGAGTCCAATACAAATGGAAGACTATTGTGGGACTTCTTACAACAACTTCTGAATGACCCAACGCAAAGATACACAAACTATATTGCATGGAAGAACAGAGACACTGGCGTGTTTAAAATTGTTGATCCTGCTGGACTAGCCAAATTGTGGGGAATTCAAAAAAATCACCTATCCATGAACTACGACAAAATGTCCCGCGCCCTGAGATATTATTACCGTGTTAATATTTTGCGCAAAGTCCAGGGCGAAAGACACTGTTACCAGTTCTTAAGAAACCCAACAGAATTGAAAAATATCAAAAACATATCTCTACTGCGACAACAAATGAGTCCCACTCGCGTTGTACCACAAACTTTGGTAAAAACCGAAATGAAAGAAGAAAGATGTGACGAAGAAACAGTCGATGAAGAAATGCCTACAGATTTGAGTATGTCTGCATCAGAGCCTTGGCGGAAACGCGCACGCTCTGACACAGCGACCGCACCGCCGTCGTCAACGCAACATGACAAACATCGGATCAGTACGCTTATCGGAGATAACATGATAATGAAACGCGAAGTCGACTACAGTGCTGAGCATTATGCCTTAAATTTAAAAAGTGAAAAATGTGAACAGTAA

Protein

MKVVSLQLPSGPSMERLPLPFSPTELLWRYPLPWAPPPPSPLGDTKAQLPAGLPPEPRLWTREDVSVFLKWCEREFDLPNFDMDLFQMNGKALCLLTKTDLGERCPGAGDVLHNVLQMLVRDAALLGRVPSSPVTPTARAAPYPPSPHSHPPTPTWTVDGFHHFHSAAAAAAAQPNSVTLSPAPSVDSSGSPQRGDTVTYAPAYAPSVPPTTQAASSGSNHSDSDEEGQYAPPPRSPKEAPITSPAPQNHPTQQHPHYRAQHREFFPNDMPESNTNGRLLWDFLQQLLNDPTQRYTNYIAWKNRDTGVFKIVDPAGLAKLWGIQKNHLSMNYDKMSRALRYYYRVNILRKVQGERHCYQFLRNPTELKNIKNISLLRQQMSPTRVVPQTLVKTEMKEERCDEETVDEEMPTDLSMSASEPWRKRARSDTATAPPSSTQHDKHRISTLIGDNMIMKREVDYSAEHYALNLKSEKCEQ

Similarity

Belongs to the ETS family.

Uniprot

A0A060MZU1   H9IV87   A0A3S2LV95   A0A2A4JWA2   A0A2H1VVT5   A0A194Q8R3   + More
A0A0N1PHP8   A0A2W1BT73   A0A212ETP5   S4P5B6   A0A0L7LNR2   D2A2D2   A0A1Y1L4A1   A0A067QWI9   A0A0M8ZRG0   A0A154PDW1   A0A2J7PCL4   A0A1W4WP27   A0A1W4WYT5   A0A0L7R7I4   A0A088A2Q8   A0A026W901   U4UFY4   N6TW97   A0A2P8Y7F9   A0A0C9QJM4   A0A1L8DI34   A0A1L8DI23   A0A1L8DI20   A0A195AYJ7   A0A151WXG8   A0A195CGK1   F4WAN5   A0A0J7L0D9   E9IM04   A0A195F9A0   E2A4E3   E2C7L7   A0A3Q0JEU3   A0A1B6KJT3   E0VDJ0   A0A0A9X314   A0A023F2Y3   A0A0T6ATS8   A0A069DZ83   A0A1B6F1I1   A0A195DYE5   A0A0A1X212   A0A0K8V5K1   A0A0K8TXD2   T1I5Z9   A0A1B6J2W9   A0A1B0FPR5   A0A2H8TX82   A0A2S2PS18   A0A1B6EXL1   A0A2S2QNZ1   X1WJF4   A0A1B6EJ34   A0A226E968   A0A0P4W945   A0A0K8TW77   A0A1Z5KUT9   A0A293LMT3  

Pubmed

19121390    26354079    28756777    22118469    23622113    26227816    + More
18362917    19820115    28004739    24845553    24508170    30249741    23537049    29403074    21719571    21282665    20798317    20566863    25401762    26823975    25474469    26334808    25830018    28528879   

EMBL

AB510032    BAN37076.1    BABH01000697    RSAL01000173    RVE45083.1    NWSH01000456    + More
PCG76281.1    ODYU01004731    SOQ44918.1    KQ459299    KPJ01918.1    KQ460202    KPJ17183.1    KZ149944    PZC76844.1    AGBW02012542    OWR44863.1    GAIX01007266    JAA85294.1    JTDY01000507    KOB76856.1    KQ971338    EFA02175.2    GEZM01071296    JAV65897.1    KK852868    KDR14699.1    KQ435951    KOX68123.1    KQ434869    KZC09370.1    NEVH01027059    PNF14073.1    KQ414642    KOC66726.1    KK107386    QOIP01000002    EZA51509.1    RLU25639.1    KB632337    ERL92864.1    APGK01014040    APGK01014041    KB739180    ENN82348.1    PYGN01000836    PSN40198.1    GBYB01003724    JAG73491.1    GFDF01007972    JAV06112.1    GFDF01007966    JAV06118.1    GFDF01007965    JAV06119.1    KQ976703    KYM77115.1    KQ982668    KYQ52506.1    KQ977791    KYM99842.1    GL888050    EGI68793.1    LBMM01001475    KMQ96252.1    GL764129    EFZ18294.1    KQ981727    KYN36787.1    GL436635    EFN71690.1    GL453383    EFN76093.1    GEBQ01028268    GEBQ01014498    JAT11709.1    JAT25479.1    DS235078    EEB11446.1    GBHO01029211    GBHO01029210    GBRD01016051    GBRD01005154    GDHC01003340    JAG14393.1    JAG14394.1    JAG49775.1    JAQ15289.1    GBBI01003139    JAC15573.1    LJIG01022871    KRT78299.1    GBGD01001090    JAC87799.1    GECZ01028615    GECZ01027771    GECZ01025613    GECZ01023654    GECZ01011833    GECZ01008740    GECZ01006358    GECZ01005359    JAS41154.1    JAS41998.1    JAS44156.1    JAS46115.1    JAS57936.1    JAS61029.1    JAS63411.1    JAS64410.1    KQ980066    KYN17903.1    GBXI01009130    JAD05162.1    GDHF01018454    JAI33860.1    GDHF01033373    JAI18941.1    ACPB03013074    GECU01014161    JAS93545.1    CCAG010019933    GFXV01005973    MBW17778.1    GGMR01019650    MBY32269.1    GECZ01027218    JAS42551.1    GGMS01010283    MBY79486.1    ABLF02012080    GECZ01031867    JAS37902.1    LNIX01000006    OXA53186.1    GDRN01079274    JAI62430.1    GDHF01033766    JAI18548.1    GFJQ02008107    JAV98862.1    GFWV01010068    MAA34797.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000037510    UP000007266    UP000027135    UP000053105    UP000076502    UP000235965    UP000192223    UP000053825    UP000005203    UP000053097    UP000279307    UP000030742    UP000019118    UP000245037    UP000078540    UP000075809    UP000078542    UP000007755    UP000036403    UP000078541    UP000000311    UP000008237    UP000079169    UP000009046    UP000078492    UP000015103    UP000092444    UP000007819    UP000198287   

PRIDE

H9IV87   

Pfam

PF00178   Ets        + More
PF02198   SAM_PNT

Interpro

IPR000418   Ets_dom        + More
IPR033077   Pokkuri       
IPR003118   Pointed_dom       
IPR036388   WH-like_DNA-bd_sf       
IPR036390   WH_DNA-bd_sf       
IPR013761   SAM/pointed_sf       

SUPFAM

SSF46785   SSF46785        + More
SSF47769   SSF47769       

Gene 3D

1.10.10.10     1.10.150.50    

ProteinModelPortal

A0A060MZU1   H9IV87   A0A3S2LV95   A0A2A4JWA2   A0A2H1VVT5   A0A194Q8R3   + More
A0A0N1PHP8   A0A2W1BT73   A0A212ETP5   S4P5B6   A0A0L7LNR2   D2A2D2   A0A1Y1L4A1   A0A067QWI9   A0A0M8ZRG0   A0A154PDW1   A0A2J7PCL4   A0A1W4WP27   A0A1W4WYT5   A0A0L7R7I4   A0A088A2Q8   A0A026W901   U4UFY4   N6TW97   A0A2P8Y7F9   A0A0C9QJM4   A0A1L8DI34   A0A1L8DI23   A0A1L8DI20   A0A195AYJ7   A0A151WXG8   A0A195CGK1   F4WAN5   A0A0J7L0D9   E9IM04   A0A195F9A0   E2A4E3   E2C7L7   A0A3Q0JEU3   A0A1B6KJT3   E0VDJ0   A0A0A9X314   A0A023F2Y3   A0A0T6ATS8   A0A069DZ83   A0A1B6F1I1   A0A195DYE5   A0A0A1X212   A0A0K8V5K1   A0A0K8TXD2   T1I5Z9   A0A1B6J2W9   A0A1B0FPR5   A0A2H8TX82   A0A2S2PS18   A0A1B6EXL1   A0A2S2QNZ1   X1WJF4   A0A1B6EJ34   A0A226E968   A0A0P4W945   A0A0K8TW77   A0A1Z5KUT9   A0A293LMT3  

PDB

1SV4     E-value=1.80614e-28,     Score=314

KEGG

101736934    K03211 ETS translocation variant 6/7 | (RefSeq) BmEts2; ets DNA-binding protein pokkuri-like

PATHWAY

04013    MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)
04320    Dorso-ventral axis formation - Bombyx mori (domestic silkworm)

GO

GO:0005634   GO:0045596   GO:0043565   GO:0001709   GO:0000122   GO:0003700   GO:0003677   GO:0006357   GO:0000981   GO:0030154   GO:0006355   GO:0004713   GO:0007169   GO:0016020   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR11849:SF201  

Subcellular location

Nucleus  

Length:

476

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00011

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00103

outside

1  -  476

 

 

Pi

158.893224

Theta

184.368888

Tajima's D

-0.968712

CLR

0.694872

CSRT

0.143442827858607

Interpretation

Uncertain