Pre Gene Modal
BGIBMGA001168
Annotation
glycosyl-phosphatidyl-inositol-anchored_protein_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.714
Sequence
CDS
ATGCCTTCAGCTGCTAATGCAAAATCTGAAAAGCCGGCCTCTTCGGAGGATAAGGATACACCAATTCGACAAATTATGACGATTATTGAGCATAAAATTCGTAATTTGGAAAAACGCAAGAGTAAACTAACATCATATCGTGACCTGCAGAAAGCTGGAAAAGAGCTAAATTCTGATCAAAAAGTTGCAGTTGCTAAATATGATGAAGTTGCCCAAACCCTTGAATTTGCAAGAGATCTCTCAAAGCAAGTTACTGCTATAGCAATCTCTTCAGAGCGTGAGGCAAAAAAACAAGCTAAAAAGGAAGCCTGGGTTCGTTATGCAGCAGAGACCAACAAAATAAAAGAAGTTTTACTTATTCTGGATTGCCTTATGCAAATGGGTAGTGCAGATGCAAGGACTGATTTCATAAATGGAACAAATGGTGCTGCTAAATTAACTGAGGATGATTTAAAAATTTTGGATGATTTATACCCTGAGGTGACCCCTAAGCATGAATTAAATGAAGAAGGACAATCTGGTTTTCACCTTCAAATAACAAGAGCTGCAGAACACCTCTACTCCATAATTGATGGAAAACCTAAAGAAGTGTTAGGCACCACATACCTACGAATTAAGGAGATTGTATCAACAGTTCATGAATGTGGATACTTTGATAAAACTGTAGATGGTGCAATCGCAGAAGTAGAAGAAAGTCATGTTCCAGTAGAAGAAGAGGTGCATGAACAAGGTGAACATGAACCAGAAGTAGATATGCCAGTTGGTCCTGCATTTCCACCTACTGGCCCTCTGCCTGTACCTCCTGCACCGGCAGTTGTTCCTGCACCTGGTTATCCTCTACGTCCATTGCCGCCGATAACGTTACAAGAAGTAGAACATGCCTACTTTGCACAACAGTATCCTCAACAAAGACCCATCACAGAAGTTATAGGCTCTCAAAACTTTTTCTTTTTACAAGAGTCTGAAATTGACAGTCCGGTAGGCACACCACAACCGCCCGCGATTCCTAATCAAGTATCGCCACCTGGACCTATCCCAACTCAGACTTTTACCAATCAACATTATGTACAATTACCCGGGGGTAGAGTCCCGGAACCTGGCAGCATGCCCATGCCGCCTCAGCCTCATTTTCCACCGCATCCAGAGCATGCAGGGTTTGCACCGGCACCCGTGCCCATGCCGCCCGTACCTACGCACCCGCACGGTCCTCTGCCCGCCAATCTACCGCCCCCGCTGCCGCCTGTCACGCACGCCGCCCCTCCACCTCAGCCCGTACATCACACAATGCAACCCGCTCTCGTCGCGACTCTGGTACACGCCTCTGTTACGCCCGTTCTGCAAGAAGATACTTCGCCGGTTTCGCCCGTGACCGATAAAGAAGACGATTGCAGAAAAGATGGACCGAGTCCAGAGTTAGAGAACGGTGGCGACCGTAAGGGAGACTCCCAGAGTCGATACAGACGTTTCGGTCGCGGCGGCCGAGGCGCACCGAACGGTCATCGCGGCCGAGGCGCTTTCCCTAATCGTCAAGGCGGTGACGGCTATCGGGGCCGACAAGGTGGTGATTACCAAAACAGATCGAACAGGGAAGGATTTCAAAACAGACAATATGACGGCTACCAAAATAGGCATGCGAACCGTACCGGTGGCGACGGATATTATGGCAACGGTGACGTGTCAGAAGGTGCACATCACGCCGAGAACGGTCGTGAGCGGTATGGAGAAGGCAACGGCTTCCAGGGAGGATACAAGGGACGCGGTAGAGGAGCTCCTCGAGGAGCAACACGCGGTGCGTCTCGGCCTCCCCGCGCTCAACACTACACAAGGAGATCCGATAATGCTGAATAG
Protein
MPSAANAKSEKPASSEDKDTPIRQIMTIIEHKIRNLEKRKSKLTSYRDLQKAGKELNSDQKVAVAKYDEVAQTLEFARDLSKQVTAIAISSEREAKKQAKKEAWVRYAAETNKIKEVLLILDCLMQMGSADARTDFINGTNGAAKLTEDDLKILDDLYPEVTPKHELNEEGQSGFHLQITRAAEHLYSIIDGKPKEVLGTTYLRIKEIVSTVHECGYFDKTVDGAIAEVEESHVPVEEEVHEQGEHEPEVDMPVGPAFPPTGPLPVPPAPAVVPAPGYPLRPLPPITLQEVEHAYFAQQYPQQRPITEVIGSQNFFFLQESEIDSPVGTPQPPAIPNQVSPPGPIPTQTFTNQHYVQLPGGRVPEPGSMPMPPQPHFPPHPEHAGFAPAPVPMPPVPTHPHGPLPANLPPPLPPVTHAAPPPQPVHHTMQPALVATLVHASVTPVLQEDTSPVSPVTDKEDDCRKDGPSPELENGGDRKGDSQSRYRRFGRGGRGAPNGHRGRGAFPNRQGGDGYRGRQGGDYQNRSNREGFQNRQYDGYQNRHANRTGGDGYYGNGDVSEGAHHAENGRERYGEGNGFQGGYKGRGRGAPRGATRGASRPPRAQHYTRRSDNAE
Summary
Uniprot
EMBL
PRIDE
Pfam
PF18293 Caprin-1_dimer
ProteinModelPortal
PDB
4WBP
E-value=4.23279e-13,
Score=183
Ontologies
GO
PANTHER
Topology
Length:
615
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00029
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00073
outside
1 - 615
Population Genetic Test Statistics
Pi
133.532592
Theta
177.440346
Tajima's D
-1.104619
CLR
353.179302
CSRT
0.123693815309235
Interpretation
Uncertain
