SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07928
Pre Gene Modal
BGIBMGA000976
Annotation
PREDICTED:_uncharacterized_protein_LOC101744850_isoform_X2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.573
 

Sequence

CDS
ATGGATCCAGTGGGACCATGGTCAGCATATGCGTCATACAACCGATTAGCAGGGGTCCAAGCTGGTGCTGCAAGTGGGGACTTTCATCACCACCTTGCAAGCGGTGGATCAGGATTAGGCAGCCAGTCAGTCCCATCAACAACGAGTCAATTACTACTCCAGGCAGCACACACAACAGCTTCATTAGCAGGCCAACTTGGTTCATCAACTGCATCACCTTTCAATCCTGGAGGATTTTTATCTCCACCATCTGTAGGATATGATGCAATGTTTTCACCTCTTTTTCATCATGCCAATCCAAAACCGGCCCATTACAGTTCTTCATTACAAGCACAACATCGGCAAGTTATAGCCCAAGCTCAAGCCGCTGTTGCCTCTAAACAATCTTCAGTTGAATCTGAACTTTCTTCGTTGAGAGAGAATTACTCACATCAGACACTTGCTGCACAGGGTGCATCGTTTTTTGACCAATCCTCAACCCCAGGAAGCACTACGGGATTGAGTTGGCAAGGAAACAATCAACTTCCAAGTCCGTTTGGAATATTACCACATGAAAGTGTAGTGCCTTCATCACCTAGCCCTGCAACAACAAAGGCATCTTCAACTTATGAGAATTTTAATGCACACTTTGCTGCAGCACAAACAATCAATAATCATCTCAATTCACAAATTTCTAGTACTGGTAAACAAGCAAATAGGTCAGGATCACCAGCAACTGCAACAAAACAGCCAGCAACATCAACACCATCATCAACGTTTTTCCAATCTCCGACTACATTTGGAAATCAGACTGATAATTCATATAGTACAAGCAGTGCTAAAAGTGGTCAACTATCATCACAGCAGGATTATGCTGGAAAACAACGAGCAAATACTACATCGTCGGTAGCACCCTCTTCACAGCAGCAGACCATAAACAGCACTTCACAAGACGCTACTTCGAAAATAATGGAAAAAAAATTCAGCGTTCCGGTCACGGGTCCTGGCTCAGGCTTCATGGCTTCTTATTTAAAATTTTTGCAAGGAGAACGCGATACTTCTCCCCCTCCGGCAGGAAGAGGCGCCAGGAAATCTACGTGGTCAAGAACAAATACAAATAGCAACACTAGTAATAAACCATATGGTCAGAATGACCTTACTAAAAGTCCATGTGATTCCAGTGTCACACAACACAGTGCTAATGGTGCAATGCCGTCTTCAAATGTAATAAATACAGGCATGTCATTAGGCAATCAAGTAATGAGCTCTTCTGCTAGTATGAGCACAACCGGTTTGTTAGGTGCTAACCAGGTACATAGTGGGTCATCAAATCTTCTGAACTCACAAGGAAAGGGAGTTGAGTTAGATGATCCTCGTTATTACAATTTAAATAAAGATCGGAAACGTAAATACGATGGAACTGAAGAATCCGCTTATGATGCGGAAGAGGAAGCCCGCAGGTTAAATAAGCCGGTGCTAAATGTACCTAGTACGCCTTTAAATGACAAAGCAAAGAAGGGTCGAACTACGCCGTTAAATAAGCCGACTCCTTCAGCCGTAGTGGCGCCTCAGCCGGCCGCGCCCAAGAAGCCACGACCGCCTGCGCCGCCGCCCGTGGCCGCGCTGCATCCTGCGCCACAACAACAATACTATTATCAGCATCAACCTGACGAAGTGTCTAGCCACGGAAGTAATTTGGCCTATGGAATTTATGGTGCAACCGACAGTGACAGTGCAAATAGAAAATTACAACAAATGAATAAGTCTCATCAACAAGTGACGTCCACAACGGGTCAGATGGACGGCACGAGGCCATTGGAGGAAATGCCGTATCAGTCTGGTGAATTCGTCGCGTTAAAAACTGATTTAAATGATATGTGGCCGGCGATTTGGAGGGTCGACGGTAAAACCCTGTTACAAAAATATGAACCATTTGAAGAAAACGGAAAAGTTTTATATCGCAATATATCAACGTACACAGTGTGGAACCCAGAAAACAAGAAATTGTATACCCAAGTACCAGTAAAAGTAAGATCACAGACACATCTAGAAACAACTGTAGAATTAATAAGAAGTGAAATGCCATTCGACGATTGCAATTTCATAGAGAAAAGAATGTTGGAAACGCAAATGTATCAAGAGAACTTCGAAGTTTACATCCAAACTTTAATTTCTCATGCCCTGGATCCGAATTTTTTAACAGAGATATTCCAAGAACAAGATGAGTACTTCCTGTCGAACGTGAAGACAGTGGACGAGGTGACGGAGAGCATGCGCGCGCGGGTGTCGGGCGCGGCGAGCGGGCGGGCGCTGGACGCGGCGCTGGCCACGTGGCCCAACCTCAGCGTCACGGCCGGCGCCGGCTCGTGCCGCGCGTGCGCTCGCCCCGCCGTCGCCACGCTGCTGCTCTTCGGACAGCCCTACAACCCCGCTACGCTAGACCCCGTCCAGCCCGACGCCAGACTCGCTTACGAGAAGGAATTCCTTGTATGTGCCACGTGCTGCGGCAGAGTACAGCTGTATTCGAGGATATCCCATCAAAAGTATTTAATGTATGTAGAATGTAGTAAACGAGTGGCTGAAAAACGAATGCAAAACCCCAGTAAGGACACGACGGTTATATTAAACGAACTCTTGGCGGATGAAGCTTGGCTCTCACAGTTATTCCGGGACGTAAGGCATTCGTGGGCTGAGGCGGAATCCTGGGAACGTAAAATGAGACACGCGATGTCCCGACAAATGATATAA
Protein
MDPVGPWSAYASYNRLAGVQAGAASGDFHHHLASGGSGLGSQSVPSTTSQLLLQAAHTTASLAGQLGSSTASPFNPGGFLSPPSVGYDAMFSPLFHHANPKPAHYSSSLQAQHRQVIAQAQAAVASKQSSVESELSSLRENYSHQTLAAQGASFFDQSSTPGSTTGLSWQGNNQLPSPFGILPHESVVPSSPSPATTKASSTYENFNAHFAAAQTINNHLNSQISSTGKQANRSGSPATATKQPATSTPSSTFFQSPTTFGNQTDNSYSTSSAKSGQLSSQQDYAGKQRANTTSSVAPSSQQQTINSTSQDATSKIMEKKFSVPVTGPGSGFMASYLKFLQGERDTSPPPAGRGARKSTWSRTNTNSNTSNKPYGQNDLTKSPCDSSVTQHSANGAMPSSNVINTGMSLGNQVMSSSASMSTTGLLGANQVHSGSSNLLNSQGKGVELDDPRYYNLNKDRKRKYDGTEESAYDAEEEARRLNKPVLNVPSTPLNDKAKKGRTTPLNKPTPSAVVAPQPAAPKKPRPPAPPPVAALHPAPQQQYYYQHQPDEVSSHGSNLAYGIYGATDSDSANRKLQQMNKSHQQVTSTTGQMDGTRPLEEMPYQSGEFVALKTDLNDMWPAIWRVDGKTLLQKYEPFEENGKVLYRNISTYTVWNPENKKLYTQVPVKVRSQTHLETTVELIRSEMPFDDCNFIEKRMLETQMYQENFEVYIQTLISHALDPNFLTEIFQEQDEYFLSNVKTVDEVTESMRARVSGAASGRALDAALATWPNLSVTAGAGSCRACARPAVATLLLFGQPYNPATLDPVQPDARLAYEKEFLVCATCCGRVQLYSRISHQKYLMYVECSKRVAEKRMQNPSKDTTVILNELLADEAWLSQLFRDVRHSWAEAESWERKMRHAMSRQMI

Summary

Pfam
PF13926   DUF4211
Interpro
IPR025451   DUF4211       

Ontologies

GO

Topology

Length:
908
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00440999999999999
Exp number, first 60 AAs:
0.00191
Total prob of N-in:
0.00014
outside
1  -  908
 
 

Population Genetic Test Statistics

Pi
172.018355
Theta
180.665884
Tajima's D
-0.773761
CLR
1.159698
CSRT
0.183940802959852
Interpretation
Uncertain
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