SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07926
Annotation
glycosyltransferase_precursor_[Bombyx_mori]
Full name
Beta-1,4-mannosyltransferase egh      
Alternative Name
Protein egghead
Protein zeste-white 4
Location in the cell
PlasmaMembrane   Reliability : 4.684
 

Sequence

CDS
ATGATCAGAGGGCGAATAAAACATTTGCTACATTGCATGTTTTTTTTACTCTTCATTTTTTTTTTCCTCGTGTTTGCTGGGGCTATTAATCTGGATGATAAAGAAAAAGAATTCATTGATCCTTGGGAGAATTATGGAGTTTTTGGTGCACTTATATTGTATATCCTGCGACTTCTGACTTTACTCACAATACCACAGGTGCTCTGCAATTTTGCTGGCCTAACTTTATTCAACGCTTTTCCTGGAAAAATTCGACTGAAAAGCTCACCATTACTTGCTCCGTTTATTTGCATAAGAGTGGTCACAAGAGGGGATTTCCCAAAACTGGTAAAAGATAATGTGAATAGGAACATGAATAAGTGTATAGATGTTGGCATGGAGAACTTTATGATAGAAGTTGTGACTGACAAAGCTATAAATTTGCCAAAACACCGAAAAGTAAGAGAAGTAGTAGTTCCATCAGATTATCAGACTAAATCTGGAGCTTTATTCAAGGCGCGAGCCCTACAATATTGTTTAGAAGATCAAGTGAACATACTGACAGAGACTGATTGGATTGTACATTTAGATGAAGAGACTCTTTTGACAGAAAATTCATTAAGGGGAATTTTAAATTTTGTTATGGATGGACAGTATCAATTTGGCCAGGGTCTCATCACTTATGCCAATGAACAGATTGTAAATTGGTTGACAACATTAGCAGATAGTTTCAGAGTTGCTGATGATATGGGCAAGCTAAGGCTGCAATTTTATCTATTCCATAAACCACTGTTTAGTTGGAAAGGATCTTATGTAGTAACACAAGTAAGTGCAGAGAAGAAAGTATCTTTTGATAATGGCCTTGATGGGTCAGTGGCTGAAGATTGTTTTTTTGCCATGAAGGCATATAAGGAAGGCTACACATTTAATTTTGTTGAAGGAGAAATGTGGGAAAAATCCCCTTTTACTCTTTGGGATTTCATGCAGCAACGAAAAAGATGGATTCAAGACATTGCTTGTGGATTTACAGCAGCTGTTAACATTTATATGTACATTTTTGGAGTCATCAAGTCATTTCCTGTACACAGATTTGGACCATTAAAGTTTATACTATTTGTTGGGGGAGCTTTGGCTACTATTCCATTAAACATAGTTATTGAAAATATTGCAGTTATTTGGGGAATGTTAGGAAAAAAGCACAAATTTTATATTGTTAACAAAGAAATTAAAACACCTGTTACTGTGTGA
Protein
MIRGRIKHLLHCMFFLLFIFFFLVFAGAINLDDKEKEFIDPWENYGVFGALILYILRLLTLLTIPQVLCNFAGLTLFNAFPGKIRLKSSPLLAPFICIRVVTRGDFPKLVKDNVNRNMNKCIDVGMENFMIEVVTDKAINLPKHRKVREVVVPSDYQTKSGALFKARALQYCLEDQVNILTETDWIVHLDEETLLTENSLRGILNFVMDGQYQFGQGLITYANEQIVNWLTTLADSFRVADDMGKLRLQFYLFHKPLFSWKGSYVVTQVSAEKKVSFDNGLDGSVAEDCFFAMKAYKEGYTFNFVEGEMWEKSPFTLWDFMQQRKRWIQDIACGFTAAVNIYMYIFGVIKSFPVHRFGPLKFILFVGGALATIPLNIVIENIAVIWGMLGKKHKFYIVNKEIKTPVTV

Summary

Description
Glycosyltransferase with a proposed role in glycosphingolipid biosynthesis. Neurogenic protein implicated in epithelial development. Critical component of a differential oocyte-follicle cell adhesive system.
Similarity
Belongs to the glycosyltransferase 2 family.
Keywords
Complete proteome   Developmental protein   Glycosyltransferase   Membrane   Reference proteome   Transferase   Transmembrane   Transmembrane helix  
Feature
chain  Beta-1,4-mannosyltransferase egh
EC Number
2.4.1.-
EMBL
AB620071    BAK82123.1    KZ149944    PZC76838.1    JTDY01000299    KOB77813.1    + More
ODYU01001272    SOQ37258.1    RSAL01000173    RVE45088.1    KR362876    AMR34865.1    NWSH01000456    PCG76288.1    HM135157    ADJ10634.1    GU321343    ADB79796.1    AGBW02013511    OWR43317.1    KK852918    KDR13845.1    GALX01003920    JAB64546.1    GL435311    EFN73500.1    GECU01032782    GECU01019442    JAS74924.1    JAS88264.1    GBYB01001773    GBYB01013103    JAG71540.1    JAG82870.1    GEBQ01026888    JAT13089.1    CH954183    EDV45636.1    KQ971338    EFA02466.1    MWRG01007646    PRD28137.1    JH432018    AE014298    BT133075    AAN09081.1    AEX93160.1    AHN59300.1    U15602    U21218    AF233288    AL138972    CH480825    EDW43998.1    KQ982080    KYQ60369.1    NEVH01025635    PNF15253.1    IAAA01007723    IAAA01007724    IAAA01007725    IAAA01007726    LAA01428.1    KQ977444    KYN02634.1    CH963851    EDW75156.1    CM000162    EDX01358.1    KRK06079.1    BT071797    ACN43733.1    KQ976401    KYM92445.1    GL449036    EFN83389.1    ADTU01013344    QOIP01000001    RLU26402.1    GL888387    EGI61785.1    KK107154    EZA56946.1    CP012528    ALC48978.1    KQ978625    KYN29640.1    NNAY01002072    OXU22163.1    GAMC01015458    JAB91097.1    KQ981490    KYN41146.1    CH940653    EDW62649.1    KRF80747.1    KRF80748.1    KRF80749.1    KRF80750.1    KRF80751.1    CH933810    EDW06659.1    GBHO01007379    GDHC01017011    JAG36225.1    JAQ01618.1    GFDL01009409    JAV25636.1    CH902632    EDV32812.1    KPU74152.1    GBRD01014818    JAG51008.1    CH916376    EDV95367.1    GBXI01014481    GBXI01011496    GBXI01004846    GBXI01002236    JAC99810.1    JAD02796.1    JAD09446.1    JAD12056.1    CH379064    EAL32023.1    KRT06776.1    KRT06777.1    ATLV01013120    KE524840    KFB37249.1    OUUW01000003    SPP77874.1    CH479192    EDW26515.1    AXCN02001382    AXCN02001383    AXCN02001384    GAKP01017985    GAKP01017984    GAKP01017983    JAC40969.1    GALA01001144    JAA93708.1    GGMS01009478    MBY78681.1    ABLF02039332    KZ288254    PBC30872.1    JXUM01083347    GAPW01001361    KQ563371    JAC12237.1    KXJ73959.1    GDHF01028883    GDHF01018930    JAI23431.1    JAI33384.1    AJVK01010863    AJVK01010864    AJWK01028657    AJWK01028658    AJWK01028659    AJWK01028660    GANO01001266    JAB58605.1    CH477312    EAT43883.1    UFQT01000099    SSX19885.1    GGFM01008371    MBW29122.1    GFDL01009375    JAV25670.1    ACPB03015936    ACPB03015937    ACPB03015938    ACPB03015939    GGFJ01005117    MBW54258.1    DS235875    EEB19769.1    GFWV01020271    MAA44999.1    ADMH02000938    ETN64627.1    GFTR01006393    JAW10033.1    AAAB01008963    EAA12038.3    GGLE01004963    MBY09089.1    KK854118    PTY11598.1    LJIJ01000455    ODM97323.1    GFDF01001628    JAV12456.1    GGFK01008909    MBW42230.1    GFDF01001627    JAV12457.1    AXCM01006665   
Pfam
PF13632   Glyco_trans_2_3
Interpro
IPR029044   Nucleotide-diphossugar_trans        + More
IPR001173   Glyco_trans_2-like       
IPR027389   B_mannosylTrfase_Bre-3/Egh       
SUPFAM
SSF53448   SSF53448       
Gene 3D

Ontologies

Topology

Subcellular location
Membrane  
Length:
408
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
89.6222200000001
Exp number, first 60 AAs:
34.30243
Total prob of N-in:
0.99884
POSSIBLE N-term signal
sequence
inside
1  -  8
TMhelix
9  -  31
outside
32  -  45
TMhelix
46  -  68
inside
69  -  330
TMhelix
331  -  348
outside
349  -  362
TMhelix
363  -  385
inside
386  -  408
 
 

Population Genetic Test Statistics

Pi
227.464399
Theta
197.756918
Tajima's D
0.562715
CLR
0
CSRT
0.532623368831558
Interpretation
Uncertain
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