Gene

KWMTBOMO07921

Pre Gene Modal

BGIBMGA013162

Annotation

PREDICTED:_uncharacterized_protein_LOC105388832_[Plutella_xylostella]

Location

Bomo_Chr13(-):10150301-10151166      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.518 Nuclear   Reliability : 1.802

CDS

ATGACTAAGTTCAGTGGCGAAGATCACACTTACACCTCGACGAAATGGGCGCAGGATCTAGAAGACAACGCCGAAATATTTGGATGGTCGCCTCAACAACTACTTATCATAGCACGTAGATCTTTATCAGGAACAGCACAGTTATGGTTAAAGACGGAGAAGGTTCATAAAAGTTATGAAGAACTCAAGGCAGCCGTGCTCAAAGAATTTCCTGACGTGATGAACAGCAAAGAGATGCATGAGCTCATGACTGCGCGCAAGAAACATAAAGACGAGTCATATTACCAATATATGCTAATTATGAAGGAAATGGGAAAACGAGCGAGATTCCCAGATTACGTTGTCATTCAGTACATCATAGACGGCATTACAGACCTGGAGATGAATAAGGCAATTTTGTACGGTGCGGTCACCTATCCGGTGCTGAAAGAAAAGTTGTTGTTGTACGAAAGAATCAAAGAAAAATCTGCCAAACAGAATGCTGAACTACATATTAAACGAACTGCAACGGCTTCGGTTAGAGATTCCATGTCAAGAACCAACCAGTATTGTGCAATGAATTTGGCCATATTAGTTCAAAGTGCATCAATTCTAACACAGGAAGTACCGAAAGTTCGAGTTACACGAAAACGTCGGTAA

Protein

MTKFSGEDHTYTSTKWAQDLEDNAEIFGWSPQQLLIIARRSLSGTAQLWLKTEKVHKSYEELKAAVLKEFPDVMNSKEMHELMTARKKHKDESYYQYMLIMKEMGKRARFPDYVVIQYIIDGITDLEMNKAILYGAVTYPVLKEKLLLYERIKEKSAKQNAELHIKRTATASVRDSMSRTNQYCAMNLAILVQSASILTQEVPKVRVTRKRR

Uniprot

A0A2A4J934   A0A2A4JH77   A0A2A4JEK2   A0A2A4JPY0   A0A2A4J1N2   A0A2A4K4A8   + More
A0A2A4K0J9   A0A2H1VAI8   A0A2A4J7U9   A0A2A4JBF8   T1H9C0   A0A023EYH9   A0A023EZG2   J9HJJ8   W8BB66   A0A0A1XB16   A0A023F013   A0A0J7KCU5   A0A139WKB5   A0A3L8DTV3   A0A0L7QJU0   A0A0J7K9X8   A0A224XHR1   A0A0K8U1E2   A0A0A1X9Z0   A0A023EY26   J9JZ77   A0A139WE33   A0A034WUA4   D7ELA7   J9JQ65   A0A1W7R6L8   A0A0A1XFE9   X1X261   A0A034WS55   A0A0A9YCQ1   A0A0K8U2D9   A0A139WB30   A0A212FP93   W8APB2   W8C3C0   W8B0V9   A0A2M3Z2X0   K7JIL1   A0A1S4HEU1   A0A084VMA0   A0A0E4G8D8   W8C8Q1   J9JNX9   T1IC96   A0A1B0CKJ5   A0A1I8NEC0   A0A1I8NEC4   A0A2M3Z3Z7  

Pubmed

25474469    17510324    24495485    25830018    18362917    19820115    + More
30249741    25348373    25401762    22118469    20075255    12364791    24438588    25315136   

EMBL

NWSH01002403    PCG68369.1    NWSH01001586    PCG70783.1    NWSH01001874    PCG69832.1    + More
NWSH01000799    PCG74125.1    NWSH01004261    PCG65293.1    NWSH01000198    PCG78490.1    NWSH01000337    PCG77293.1    ODYU01001505    SOQ37806.1    NWSH01002797    PCG67520.1    NWSH01002225    PCG68884.1    ACPB03028153    GBBI01004550    JAC14162.1    GBBI01004551    JAC14161.1    CH478509    EJY58114.1    GAMC01016174    JAB90381.1    GBXI01005773    JAD08519.1    GBBI01004613    JAC14099.1    LBMM01009423    KMQ88147.1    KQ971327    KYB28419.1    QOIP01000004    RLU23736.1    KQ415113    KOC58816.1    LBMM01010976    KMQ87102.1    GFTR01008753    JAW07673.1    GDHF01031998    JAI20316.1    GBXI01006173    JAD08119.1    GBBI01004477    JAC14235.1    ABLF02014660    ABLF02042774    KQ971355    KYB26210.1    GAKP01001187    JAC57765.1    KQ972211    EFA11958.2    ABLF02005846    GEHC01000930    JAV46715.1    GBXI01004632    JAD09660.1    ABLF02005127    ABLF02005129    ABLF02007401    GAKP01000546    JAC58406.1    GBHO01014721    JAG28883.1    GDHF01031400    JAI20914.1    KQ971376    KYB25116.1    AGBW02003316    OWR55561.1    GAMC01020207    JAB86348.1    GAMC01002792    JAC03764.1    GAMC01015907    JAB90648.1    GGFM01002109    MBW22860.1    AAAB01008984    ATLV01014583    KE524975    KFB39094.1    HACL01000135    CFW94429.1    GAMC01007326    JAB99229.1    ABLF02011059    ACPB03027146    AJWK01016333    GGFM01002486    MBW23237.1   

Proteomes

UP000218220    UP000015103    UP000008820    UP000036403    UP000007266    UP000279307    + More
UP000053825    UP000007819    UP000007151    UP000002358    UP000030765    UP000092461    UP000095301   

Pfam

PF00098   zf-CCHC        + More
PF00077   RVP
PF00078   RVT_1
PF00665   rve
PF17921   Integrase_H2C2
PF17919   RT_RNaseH_2
PF17917   RT_RNaseH
PF02037   SAP
PF00067   p450
PF03732   Retrotrans_gag
PF14392   zf-CCHC_4
PF09668   Asp_protease
PF12017   Tnp_P_element

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR036875   Znf_CCHC_sf       
IPR001878   Znf_CCHC       
IPR001969   Aspartic_peptidase_AS       
IPR001995   Peptidase_A2_cat       
IPR000477   RT_dom       
IPR018061   Retropepsins       
IPR041577   RT_RNaseH_2       
IPR001584   Integrase_cat-core       
IPR012337   RNaseH-like_sf       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR041373   RT_RNaseH       
IPR003034   SAP_dom       
IPR002401   Cyt_P450_E_grp-I       
IPR001128   Cyt_P450       
IPR017972   Cyt_P450_CS       
IPR036396   Cyt_P450_sf       
IPR036361   SAP_dom_sf       
IPR005162   Retrotrans_gag_dom       
IPR025836   Zn_knuckle_CX2CX4HX4C       
IPR019103   Peptidase_aspartic_DDI1-type       
IPR021896   Transposase_37       

SUPFAM

SSF50630   SSF50630        + More
SSF57756   SSF57756       
SSF53098   SSF53098       
SSF68906   SSF68906       
SSF48264   SSF48264       

Gene 3D

2.40.70.10     3.30.420.10     1.10.630.10     1.10.720.30    

ProteinModelPortal

A0A2A4J934   A0A2A4JH77   A0A2A4JEK2   A0A2A4JPY0   A0A2A4J1N2   A0A2A4K4A8   + More
A0A2A4K0J9   A0A2H1VAI8   A0A2A4J7U9   A0A2A4JBF8   T1H9C0   A0A023EYH9   A0A023EZG2   J9HJJ8   W8BB66   A0A0A1XB16   A0A023F013   A0A0J7KCU5   A0A139WKB5   A0A3L8DTV3   A0A0L7QJU0   A0A0J7K9X8   A0A224XHR1   A0A0K8U1E2   A0A0A1X9Z0   A0A023EY26   J9JZ77   A0A139WE33   A0A034WUA4   D7ELA7   J9JQ65   A0A1W7R6L8   A0A0A1XFE9   X1X261   A0A034WS55   A0A0A9YCQ1   A0A0K8U2D9   A0A139WB30   A0A212FP93   W8APB2   W8C3C0   W8B0V9   A0A2M3Z2X0   K7JIL1   A0A1S4HEU1   A0A084VMA0   A0A0E4G8D8   W8C8Q1   J9JNX9   T1IC96   A0A1B0CKJ5   A0A1I8NEC0   A0A1I8NEC4   A0A2M3Z3Z7  

KEGG

NA   

GO

GO:0003676   GO:0008270   GO:0004190   GO:0015074   GO:0020037   GO:0016021   GO:0005506   GO:0016705   GO:0005634   GO:0006313   GO:0004803  

Length:

212

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.15577

Exp number, first 60 AAs:

0.00132

Total prob of N-in:

0.32346

outside

1  -  212

 

 

Pi

129.19868

Theta

146.179072

Tajima's D

-0.538671

CLR

321.574

CSRT

0.227788610569472

Interpretation

Uncertain