Gene

KWMTBOMO07920

Pre Gene Modal

BGIBMGA014468

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC106709759_[Papilio_machaon]

Location

Bomo_Chr13(-):10112786-10117809      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.37

CDS

ATGGCACCCGTAATCCCTGAAATAACATTACCCGCGTCTGCAGAGGACATAAACAGTAGGGACACATACCTCGAAACCGTCCGTAAGCTCATATCCTGCATCACAACAGCTGTGACTGAGGGAAAAAGTGTTACCGCAGCTAACAAGCGCCTTATCTGCTCCGCGGCGGAGGAAATTCGTAGGGCGACGAGAGTGTTGGAAACAACACTCGCATCGACACTGACACCACCAACCCCCTCTCCACCTGCCACCAACGAAGGTTTGAAGGAGGAGATTATCGCTTGCGTCAGAGAGGAGTTCAAGCGGCATAGACAACTACCGCCGCTGACCCTTCAATCACAAGTTCGCCCATCGTATGCCCAAGCCGCAGCACCCAACCCCCGGAAACCAGCCCTTACGACCAAACCAACACCCAAAACATATCCAGCTACAAAACCTGCAATTATTGTCTCAGCAAAAACCGAAGTAAAGACGAAACAGGATATTATCGAGGCCTGGAGGCGCAACATCAGCTTCAAAAATTCCGGCTTTGCCCCTAGCAGAGTACAAGCTGTATCAAATAACAAACTAAGAATCGAGTTCGATAACATAGAACAAAGGAACGATACCCTCACTCGTATCACTAACTCCCAGACAATTCACGCCGAACCCGCTCGCAGGCTGCTGCCTATGCTCAATCTCAAGGGAGTCTCCAAAGACGTTCCCGCTGAAGATCTAGTGAGCATAATCAGCAGACAGAACCCGGAACTCACTAACGCAATCAACCAAAAGGAGGACTTGCGGTTTCGTTTCCAGCGCTCCAACAGAAACCCCAACTTATATAACGCCATCCTAATTGCACAGCCAACTGTCTGGCGTAAGTGTATAAGCCTGGGCAGAATCAGTGTGGACCATCAACGTATTCACGTAGAGGAGTTCACACCGTTCCTGCAGTGTCACAAGTGCCTTAGCTTCGGCCACACTAAAAACAAGTGTTCGTCCACCGAACAATACTGTGCACACTGCAGCGCAAATAACGAGGTCAAAAACATCCCCGGAATTAACATTTACCAATTCTCTGACGGCGCGCGTGTCAAGGCCTGCATACTAGCTAAGACAGGTGTCGGCTCAGTCCTCGGCCTATCCCAATACTCTTCGGCAAACCTGTCGGTCATACAGCTAACGGCAGGAAACAAGAAGACGTACATAGCCTCAACGTACATCGAACCCGATGTCGATGCCAACGGCACCATGGAGCGTCTGGAAGTTTTCCTTAAAGACATAGGAGGGGCGAGAGTAATTGTGGGAGGTGACTTCAATGGATGGCACCCATCGTGGGGGAGCGTGAGGGTGAACCCCAGAGGCTCATCACTAGTCGAACTAGCGCACAGCAACGATTTATACATTTGTAACTCAGGAGACACTCCAACCTTCGAAACCATCACTCATGGCCGCAATAGATCATCCATCATCGACCTTACTCTTGCATCCAGCGACCTCTTCAACAGCATCTCTGAATGGCACGTAAATCTTAACACATGCCCCACCTCCCAACACAACGCCATTGAATTCTCACTTAACACCAACGAAAACACAAATAAACACGCAGAAAACACTTCCACATTCCTATACAAGTCGGAACAAGCCAATTGGACAATATTTAGAAACACCCTCCACACTCTTATGGCCAACACAGACATCCTTGATAGGAGCGTTGAAAGCTTAAGCCCAGAGGGACTTGAGTCGCTCCTTCGGGAAGTCACGGACATCCTACACCGGGCCTGTAGGGCATCGATGCGAGTAAAAGCAGGCTCTGGGAATAGACACAAGCCGCCTTGGTGGAACGATCGTCTTCAGGACCTTAAAAACGAGGTAATCAACGTACATCGCAGATTACGTGCGGCCAAGAGACAGAACCTACCATTGGATGACCTCATAGAGCAACAGCAGACGAAAAAAGCCCTATACGCCGATGCCCTACGTGCAGAGTCGACGAGAAGCTTCCGCAGCTTCTGTGAATTACAAACGAAGGAAAATGTATGGTCACTCACCAACAGACTTTTAAAGGAATCCACCCCTAAACGGCCACCAGCTACTCTTAAGACTGGAAATACATTCACCACCTGTGCAAAAGAGACGGCGGAGGCTCTCTTAGAGCACTTTTACCCTGCTGACACTCCAGACACCATAGCACGACATCACCAACTTCGCGCATGCTACGACGCTCCCGTAGACACTGAAAATGACCTACCATTCACCGAGGAGGAGGTCATGGAGTGTCTGCAATACATGAACCCCAAAAAGGCCCCAGGGCTCGATCACATAACAGCTGACATATGCCAACAATTCGCATCCGCTTACCCCCGCTTAATCACCAACATTATGAACCGCTGCCTCACCCTTCAACACTTCCCCGATCAGTGGAAAACTGCGTATGTAAAAATCATCCCGAAGCCCGGTAAAAGCGACCACACATCTCTCACCTCATTCCGACCCATTGGACTCATCCCCGTCCTTGGAAAGCTCCTCGAAAAACTGATCACCATACGGATTATGCATTGGGCATCTGTCACAGGAAGGAGCAGTCAACGACAGTTCGGCTTCAAGGAGCAAACCGGCACGGTCGACGCCATTAACACCCTGATAGACACTATACGAAAAGCCAAACAAGAGAGGTCACAGGTTGTCGCCGTCTCGCTCGACATCAGGGCGGCTTTTGATAACGCCTGGTGGCCGGTCCTATTACACCGCCTTAGAGATATACGATGCCCCAAAAATATCTACGGCCTCATCAAGAGCTACCTCCGAGACAGGCGCGTCGTTCTGGACCACGGAGGAGTTCGCGTCTCCAGAGCCACGTCAAAAGGTTGCGTTCAGGGCTCGGTGTGCGGGCCTGCATTGTGGAACATCATACTTGATGAACTATTGGAGATCCATCTACCATCTGGATGCCACATGCAGGCCTACGCAGACGATGTGGTACTCGTGGTCACCGCCGAAAATGTCAATCGCCTAGAGGAGCTCACCGACACGGTTCTCCAACAGATAGTGAATTGGGGAAAAAGCGTCAAGCTCGAATTCGGGGCCTCCAAAACACAACTGATCGCCTTCACCCCCAAGGCCAGAACTCTTAGGGTGGAGATGGACGGTCAAATCTTAAAAACCTGTAAGGAGATCAAGCTCCTCGGAATAATTTTGGACGAAAAGCTACTCTTTGGCCGCCATGTACAGTACGTCCTGGGAAAAGCCTCGCGAATATTCAACAAACTGTGCTTGTACTCCCGACCAACCTGGGGTGCTCATCCCGAGAACGTGCGCACCATCTATCTCCGAGTCATCGAGCCAATCGTCACCTACGCTGCCGGGGTGTGGGGACACATAGTAAACAAGCGCTACATCAAAAAATCTTTGATGAGCATGCAGCGTGGTTTTGCCCTAAAAGCCATCAGAGGATTCCGCACTATTTCAACCTCCGCTGCTCTGGCTCTCGCACAATTCACCCCTCTAGACCTAAAAATCCGAGAAGTACACCAAATCGAAAAAGTCAGGCTCACTGGGAAAACTGAATTCCTCCCCAATGACATTTCTTATGAGAAACCTGTCCCCGTCAAGGACCTCCTACATCCCGCTAGAAGGCCGACAATCAAACCCATACCCTCCTCTGAACACCGAATTAACTCCGAAATGACGGACAGTACTCTGGTCACTCGCGTATTCACTGACGGAAGTAAGCAGGACGATGGATCAGTTGGAGCCGCATTCGTGCTTTACAGACCCGGCGACACTGAAATATCCGTAACAAAAAAGTACAAATTACACAGTAGCTGCACAGTCTTCCAGGCAGAGCTGTACGCCATCTGGAAAGCCTGTCAGTGGATTGTAAGCGAAAATCATCCCCACACATACATCTTCACCGATTCTCTCTCATCAATATACGCGATAAATAACAGAAGCAACACACACCCCATCATAGTGAACATACACAAACTCATACACGCTAACCACACTACACACAAAATTTTCATAGACTGGGTAAAGGGACACTCGGGTGTCATAGGAAACGAGGAAGCCGATGCGGCTGCCAACAGCGGCGCACGCATGCACAAGGCCCCCGACTACTCGCAGTTCTCAATATCCTACGTGAAACACAAGATTCACACAGAACACCACGCCATCTGGCAAGCCAGATACGAAAGCTCCCCGCAGGGCTCACACACAAAAACACTACTACCAAAACTGAACGACATCAAAGAACTCAACAAATGCACACAAACAAACTTTCAGCTTACACAAATACTCACAGGCCATGGATATCACAAGACATACTTACATCGCTTCAAAATAGCACCAGATGACACCTGCCCCTGCGACGGCACTTCCAGCCAAACTGTAGAACACCTCCTTAAAAACTGCCAAGTGTTCGCTGCGAAAAGGCACAGCCACGAAGAAACGTGCCACGAAGTACAGGTGTCACCATATAATTTACCTGAAATGTTAAAAAAGAAAGCTGCAATCAACTCTTTCACTTCGTTTTGCCAAACAATAATCAACAACATCAAGAAAATAAATGAAAACAATTAG

Protein

MAPVIPEITLPASAEDINSRDTYLETVRKLISCITTAVTEGKSVTAANKRLICSAAEEIRRATRVLETTLASTLTPPTPSPPATNEGLKEEIIACVREEFKRHRQLPPLTLQSQVRPSYAQAAAPNPRKPALTTKPTPKTYPATKPAIIVSAKTEVKTKQDIIEAWRRNISFKNSGFAPSRVQAVSNNKLRIEFDNIEQRNDTLTRITNSQTIHAEPARRLLPMLNLKGVSKDVPAEDLVSIISRQNPELTNAINQKEDLRFRFQRSNRNPNLYNAILIAQPTVWRKCISLGRISVDHQRIHVEEFTPFLQCHKCLSFGHTKNKCSSTEQYCAHCSANNEVKNIPGINIYQFSDGARVKACILAKTGVGSVLGLSQYSSANLSVIQLTAGNKKTYIASTYIEPDVDANGTMERLEVFLKDIGGARVIVGGDFNGWHPSWGSVRVNPRGSSLVELAHSNDLYICNSGDTPTFETITHGRNRSSIIDLTLASSDLFNSISEWHVNLNTCPTSQHNAIEFSLNTNENTNKHAENTSTFLYKSEQANWTIFRNTLHTLMANTDILDRSVESLSPEGLESLLREVTDILHRACRASMRVKAGSGNRHKPPWWNDRLQDLKNEVINVHRRLRAAKRQNLPLDDLIEQQQTKKALYADALRAESTRSFRSFCELQTKENVWSLTNRLLKESTPKRPPATLKTGNTFTTCAKETAEALLEHFYPADTPDTIARHHQLRACYDAPVDTENDLPFTEEEVMECLQYMNPKKAPGLDHITADICQQFASAYPRLITNIMNRCLTLQHFPDQWKTAYVKIIPKPGKSDHTSLTSFRPIGLIPVLGKLLEKLITIRIMHWASVTGRSSQRQFGFKEQTGTVDAINTLIDTIRKAKQERSQVVAVSLDIRAAFDNAWWPVLLHRLRDIRCPKNIYGLIKSYLRDRRVVLDHGGVRVSRATSKGCVQGSVCGPALWNIILDELLEIHLPSGCHMQAYADDVVLVVTAENVNRLEELTDTVLQQIVNWGKSVKLEFGASKTQLIAFTPKARTLRVEMDGQILKTCKEIKLLGIILDEKLLFGRHVQYVLGKASRIFNKLCLYSRPTWGAHPENVRTIYLRVIEPIVTYAAGVWGHIVNKRYIKKSLMSMQRGFALKAIRGFRTISTSAALALAQFTPLDLKIREVHQIEKVRLTGKTEFLPNDISYEKPVPVKDLLHPARRPTIKPIPSSEHRINSEMTDSTLVTRVFTDGSKQDDGSVGAAFVLYRPGDTEISVTKKYKLHSSCTVFQAELYAIWKACQWIVSENHPHTYIFTDSLSSIYAINNRSNTHPIIVNIHKLIHANHTTHKIFIDWVKGHSGVIGNEEADAAANSGARMHKAPDYSQFSISYVKHKIHTEHHAIWQARYESSPQGSHTKTLLPKLNDIKELNKCTQTNFQLTQILTGHGYHKTYLHRFKIAPDDTCPCDGTSSQTVEHLLKNCQVFAAKRHSHEETCHEVQVSPYNLPEMLKKKAAINSFTSFCQTIINNIKKINENN

Uniprot

Q93139   Q9BLI5   A0A1W7R9Y4   A0A224X5M4   A0A0K1IK29   A0A023EX80   + More
A0A0K1IK14   A0A087TAD8   A0A087TI44   A0A087UHT1   A0A1B6G0A1   A0A142LX31   A0A087TUG6   U5EVA2   K7JMI9   A0A142LX39   A0A142LX24   U5EV73   U5EW32   A0A224X5X2   O18558   U5EPW8   A0A0G2LA86   A0A142LX33   A0A226DPQ5   J9MA04   A0A0G2KM65   U5EG91   U5ERW4   A0A226DQD5   A0A226E8J9   K7JA12   U5ES21  

Pubmed

7623845    15247245    11319268    25474469    25527032    20075255    + More
23594743   

EMBL

D38414    BAA07467.1    AB046668    BAB21511.1    GFAH01000444    JAV47945.1    + More
GFTR01008639    JAW07787.1    KP771711    AKU04648.1    GBBI01004920    JAC13792.1    KP771712    AKU04650.1    KK114278    KFM62077.1    KK115320    KFM64783.1    KK119855    KFM76920.1    GECZ01013919    JAS55850.1    KU543676    AMS38357.1    KK116791    KFM68755.1    GANO01003496    JAB56375.1    AAZX01008070    KU543680    AMS38365.1    KU543672    AMS38350.1    GANO01003537    JAB56334.1    GANO01003141    JAB56730.1    GFTR01008541    JAW07885.1    U87543    AAB65093.1    GANO01003536    JAB56335.1    CR848788    KU543677    AMS38359.1    LNIX01000015    OXA46641.1    ABLF02008888    ABLF02016960    ABLF02032572    BX908731    GANO01003539    JAB56332.1    GANO01003538    JAB56333.1    LNIX01000013    OXA47423.1    LNIX01000005    OXA53875.1    AAZX01016607    AAZX01023407    GANO01003451    JAB56420.1   

Proteomes

UP000054359    UP000002358    UP000000437    UP000198287    UP000007819   

PRIDE

Q93139    Q9BLI5   

Pfam

PF00075   RNase_H        + More
PF00078   RVT_1
PF14529   Exo_endo_phos_2
PF16012   DUF4780

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR012337   RNaseH-like_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR002156   RNaseH_domain       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR013604   7TM_chemorcpt       
IPR031961   DUF4780       

SUPFAM

SSF56219   SSF56219        + More
SSF53098   SSF53098       
SSF57756   SSF57756       

Gene 3D

3.30.420.10     3.60.10.10    

ProteinModelPortal

Q93139   Q9BLI5   A0A1W7R9Y4   A0A224X5M4   A0A0K1IK29   A0A023EX80   + More
A0A0K1IK14   A0A087TAD8   A0A087TI44   A0A087UHT1   A0A1B6G0A1   A0A142LX31   A0A087TUG6   U5EVA2   K7JMI9   A0A142LX39   A0A142LX24   U5EV73   U5EW32   A0A224X5X2   O18558   U5EPW8   A0A0G2LA86   A0A142LX33   A0A226DPQ5   J9MA04   A0A0G2KM65   U5EG91   U5ERW4   A0A226DQD5   A0A226E8J9   K7JA12   U5ES21  

PDB

1WDU     E-value=8.36275e-16,     Score=210

KEGG

NA   

GO

GO:0004523   GO:0003676   GO:0008270   GO:0016021   GO:0016301   GO:0005515   GO:0004713   GO:0007169   GO:0016020   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR21143  

Length:

1519

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.61052

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1  -  1519

 

 

Pi

233.226927

Theta

17.749699

Tajima's D

0.481843

CLR

13827.414143

CSRT

0.51812409379531

Interpretation

Uncertain