Gene

KWMTBOMO07918

Pre Gene Modal

BGIBMGA001173

Annotation

PREDICTED:_alkaline_nuclease_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):10042083-10044169      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.405

CDS

ATGCGTCTGACGCTTGTTCTCGCAGCATTAGCTGTAGCGGTGGTGGCACTGCCCTCCAAACTTCGAACGGATCTACCAGAGCCAGGACAACTGGCTTTTGTTCTTAACGAAGATGAGTTTGAAGACTACCTCGATGCCTATCTCGCTCTTCAACAATCTGAAATGCTCGCCAATCAAACCAGGAATGATTTCCGAAGCGGTTGCACATTCCGAGTCAACGGTGATCTTGGTCAGCCTCAACCTGTATATATCCACAGAGGAAATTATTTAAGTCCAACTGGTAATACAGGTCAGATTCGTCTTAATCGTGGGGAACAAGTTCTTATCGCTTGCACAGGATCCGGCCGTACGATCCGTCACCCCAATGTTGCTTCTAACCTTGCTGTCGGGACGGTCAGCTGTCAAAACAATAATCTCGTCACAGCCAATTGGCTGCGTGGTAACAGTGCTTTCGGGCAACTCACATGCTCTTCTCACGCTCACCATGACGCTCAACAAACCAACACTAGATGCTTCAATAATCACTTTGTTATTCGTGTGGGATTCATCGTCAACAATGTATTTTATCCTCTATATTGGTCCTGCTTTGACCGCAACCGCTTAGAGGTTCTATATGTATGGTACCACCAAAACCCACCTAATTCCGTATTCCAGTCTCGCGTTGATAGGCCTAGTTGGATAGCTGGAAACTTCTTCCCCGGTGTAGCTGTTAACTCTGCCTATACTCAAGTATCTCAAAGAAACATGATCGCTGGATTCGTGGGTAATGCCCTCGCAGACAGATATGTAACGTCCACGCAGTTCTTAGCACGGGGTCATCTTGCTGCTAAGACTGACTTTATATATGCAACCGGTCAACGTGCTAGCTTCTACTTTATTAACGCTGCTCCTCAATGGCAGCCTTTCAACGCTGGAAACTGGAACCGGCTCGAGCAGAATCTTCGTCGTAGAATTGGACAGGCTGGATATCATACCATGGTCTACACTGGAACATTCCGCGTAACACAACTTAGAAATCAAAACAACCGACTTGTTGATATTTTCTTGCATCGTGCATCCAACGGCGCTCTTCAAATTCCTGTACCACTTTATTTCTACAAGGTGGTGCATGACTCCTCTCGTCGCCTCGGTACCGCCTTTATCAGTATCAACAATCCTTACTACACCCAAGCGGAGGCTCGCAATCTGCAGTTCTGCACAGACCGTTGCCGCAATAACAACGCATTCAACTGGGTGGGGTGGCAACCTGATCGCATCGACCTCGGCTATAGCTTCTGCTGTACCATTGCTGATTTCCGAAGAACTATTCCGCACCTTCCAGCTTTCAATGTTAACGGACTTCTGACATAA

Protein

MRLTLVLAALAVAVVALPSKLRTDLPEPGQLAFVLNEDEFEDYLDAYLALQQSEMLANQTRNDFRSGCTFRVNGDLGQPQPVYIHRGNYLSPTGNTGQIRLNRGEQVLIACTGSGRTIRHPNVASNLAVGTVSCQNNNLVTANWLRGNSAFGQLTCSSHAHHDAQQTNTRCFNNHFVIRVGFIVNNVFYPLYWSCFDRNRLEVLYVWYHQNPPNSVFQSRVDRPSWIAGNFFPGVAVNSAYTQVSQRNMIAGFVGNALADRYVTSTQFLARGHLAAKTDFIYATGQRASFYFINAAPQWQPFNAGNWNRLEQNLRRRIGQAGYHTMVYTGTFRVTQLRNQNNRLVDIFLHRASNGALQIPVPLYFYKVVHDSSRRLGTAFISINNPYYTQAEARNLQFCTDRCRNNNAFNWVGWQPDRIDLGYSFCCTIADFRRTIPHLPAFNVNGLLT

Uniprot

Q08JX1   A0A0N1IIN7   A0A194Q8S9   A0A2W1BYI3   A0A0N1IB53   A0A2A4JP76   + More
A0A2H1WP54   A0A219LVV6   A0A2A4JML0   F6K708   A0A2H1W493   B7VCC2   A0A194Q8R2   B7VCC3   A0A1E1WMF9   A0A219LVU7   A0A2A4JNR7   A0A2W1BP50   A0A194RKW6   A0A2H1V3T5   A0A219LVV5   A0A219LVV4   A0A0L7KR40   A0A1E1WTA0   A0A2H1WT12   A0A0N1ICG2   A0A2A4JKE1   A0A2W1BV74   A0A0L7LLE8   H9JIU6   A0A219LWI3   A0A0N1PH39   A0A194Q7A2   A0A0N1II16   A0A1B0CE89   A0A1L8DXI7   A0A3S2NR20   A0A0N0PDC8   A0A1L8DPN4   A0A1L8DXM9   B0WU96   A0A2P8ZMT4   A0A1J1IDA7   A0A2H1VP74   A0A1S4FDC9   Q176L0   A0A182RUK6   A0A336LKP8   W5JF80   A0A182M5I5   A0A182G849   W5JEZ9   A0A182QZC1   A0A182M6U5   A0A182WDU5   A0A212EIS2   A0A067RF87   A0A182VCF7   W8BUZ2   A0A182HW10   A0A182YBI8   W8BEM3   A0A182QLU4   A7UR43   A0A182JWX9   A0A182J459   A0A3B0JT56   A0A182FVL7   A0A0A1WJV0   A0A182WUG9   A0A182IU94   A0A1W4UQR3   A0A034WII0   A0A1A9UG98   B4H6U2   A0A182WQS2   Q29DJ9   B4IFY0   A0A1L8EG88   A0A0J9RZ63   A0A1L8EG81   A0A1L8EGD9   A0A1B0C252   A0A1A9ZRY2   A0A182PHB8   B3M7Q7   B4N4S4   A0A182N3S5   A0A182HW09   A0A219LVW0   A0A1I8NNQ2   A0A182WUG8   B4PH14   A0A1A9YID0  

Pubmed

17244546    26354079    28756777    26227816    19121390    29403074    + More
17510324    20920257    23761445    26483478    22118469    24845553    24495485    25244985    12364791    25830018    25348373    17994087    15632085    22936249    17550304   

EMBL

AB254196    BAF33251.1    KQ460202    KPJ17191.1    KQ459299    KPJ01928.1    + More
KZ149944    PZC76833.1    KPJ17193.1    NWSH01000988    PCG73222.1    ODYU01009979    SOQ54756.1    KM229550    AKB95589.1    PCG73221.1    HM357845    AEA76311.1    ODYU01006163    SOQ47776.1    FM253095    CAR92521.1    KPJ01927.1    FM253096    CAR92522.1    GDQN01002889    JAT88165.1    KM229544    AKB95583.1    PCG73224.1    PZC76832.1    KQ460045    KPJ18059.1    ODYU01000364    SOQ35022.1    KM229545    AKB95584.1    KM229551    AKB95590.1    JTDY01007018    KOB65521.1    GDQN01000872    JAT90182.1    ODYU01010450    SOQ55574.1    KQ458751    KPJ05311.1    NWSH01001168    PCG72289.1    KZ149927    PZC77534.1    JTDY01000675    KOB76267.1    BABH01023166    KM229547    AKB95586.1    KQ460396    KPJ15353.1    KQ459580    KPI99275.1    KQ459986    KPJ18843.1    AJWK01008671    GFDF01002907    JAV11177.1    RSAL01000132    RVE46356.1    KPJ15345.1    GFDF01005662    JAV08422.1    GFDF01002908    JAV11176.1    DS232102    EDS34867.1    PYGN01000014    PSN57821.1    CVRI01000047    CRK98271.1    ODYU01003633    SOQ42630.1    CH477386    EAT42072.1    UFQT01000005    SSX17321.1    ADMH02001680    ETN61459.1    AXCM01003118    JXUM01047237    KQ561511    KXJ78332.1    ETN61460.1    AXCN02001098    AGBW02014574    OWR41393.1    KK852672    KDR18788.1    GAMC01009439    JAB97116.1    APCN01001456    GAMC01009438    JAB97117.1    AAAB01008804    EDO64808.1    OUUW01000002    SPP76536.1    GBXI01015003    JAC99288.1    GAKP01004820    JAC54132.1    CH479215    EDW33530.1    CH379070    EAL30415.1    CH480834    EDW46567.1    GFDG01001154    JAV17645.1    CM002912    KMZ00475.1    GFDG01001153    JAV17646.1    GFDG01001156    JAV17643.1    JXJN01024350    CH902618    EDV40985.1    CH964095    EDW79148.1    KM229549    AKB95588.1    CM000159    EDW95384.1   

Proteomes

UP000053240    UP000053268    UP000218220    UP000037510    UP000005204    UP000092461    + More
UP000283053    UP000002320    UP000245037    UP000183832    UP000008820    UP000075900    UP000000673    UP000075883    UP000069940    UP000249989    UP000075886    UP000075920    UP000007151    UP000027135    UP000075903    UP000075840    UP000076408    UP000007062    UP000075881    UP000075880    UP000268350    UP000069272    UP000076407    UP000192221    UP000078200    UP000008744    UP000001819    UP000001292    UP000092460    UP000092445    UP000075885    UP000007801    UP000007798    UP000075884    UP000095300    UP000002282    UP000092443   

PRIDE

Q08JX1    B7VCC2    B7VCC3    H9JIU6   

Pfam

PF01223   Endonuclease_NS        + More
PF09243   Rsm22
PF16923   Glyco_hydro_63N
PF03200   Glyco_hydro_63

Interpro

IPR001604   DNA/RNA_non-sp_Endonuclease        + More
IPR040255   Non-specific_endonuclease       
IPR020821   Extracellular_endonuc_su_A       
IPR015324   Ribosomal_Rsm22-like       
IPR029063   SAM-dependent_MTases       
IPR038518   Glyco_hydro_63N_sf       
IPR031631   Glyco_hydro_63N       
IPR008928   6-hairpin_glycosidase_sf       
IPR012341   6hp_glycosidase-like_sf       
IPR031335   Glyco_hydro_63_C       
IPR004888   Glycoside_hydrolase_63       

SUPFAM

SSF53335   SSF53335        + More
SSF48208   SSF48208       

Gene 3D

1.50.10.10     2.70.98.110    

ProteinModelPortal

Q08JX1   A0A0N1IIN7   A0A194Q8S9   A0A2W1BYI3   A0A0N1IB53   A0A2A4JP76   + More
A0A2H1WP54   A0A219LVV6   A0A2A4JML0   F6K708   A0A2H1W493   B7VCC2   A0A194Q8R2   B7VCC3   A0A1E1WMF9   A0A219LVU7   A0A2A4JNR7   A0A2W1BP50   A0A194RKW6   A0A2H1V3T5   A0A219LVV5   A0A219LVV4   A0A0L7KR40   A0A1E1WTA0   A0A2H1WT12   A0A0N1ICG2   A0A2A4JKE1   A0A2W1BV74   A0A0L7LLE8   H9JIU6   A0A219LWI3   A0A0N1PH39   A0A194Q7A2   A0A0N1II16   A0A1B0CE89   A0A1L8DXI7   A0A3S2NR20   A0A0N0PDC8   A0A1L8DPN4   A0A1L8DXM9   B0WU96   A0A2P8ZMT4   A0A1J1IDA7   A0A2H1VP74   A0A1S4FDC9   Q176L0   A0A182RUK6   A0A336LKP8   W5JF80   A0A182M5I5   A0A182G849   W5JEZ9   A0A182QZC1   A0A182M6U5   A0A182WDU5   A0A212EIS2   A0A067RF87   A0A182VCF7   W8BUZ2   A0A182HW10   A0A182YBI8   W8BEM3   A0A182QLU4   A7UR43   A0A182JWX9   A0A182J459   A0A3B0JT56   A0A182FVL7   A0A0A1WJV0   A0A182WUG9   A0A182IU94   A0A1W4UQR3   A0A034WII0   A0A1A9UG98   B4H6U2   A0A182WQS2   Q29DJ9   B4IFY0   A0A1L8EG88   A0A0J9RZ63   A0A1L8EG81   A0A1L8EGD9   A0A1B0C252   A0A1A9ZRY2   A0A182PHB8   B3M7Q7   B4N4S4   A0A182N3S5   A0A182HW09   A0A219LVW0   A0A1I8NNQ2   A0A182WUG8   B4PH14   A0A1A9YID0  

PDB

4A1N     E-value=0.00713373,     Score=93

KEGG

767621    no KO assigned | (RefSeq) Nuc; alkaline nuclease

GO

GO:0016787   GO:0046872   GO:0003676   GO:0004519   GO:0006412   GO:0008168   GO:0009311   GO:0016021   GO:0004573   GO:0000014   GO:0000737   GO:0004529   GO:0006309   GO:0005739   GO:0004521   GO:0005743   GO:0006468   GO:0004713   GO:0007169   GO:0016020   GO:0016876   GO:0043039  

PANTHER

PTHR13966   PTHR10412  

SignalP

Position:   1 - 16,         Likelihood:  0.990527

 

 

Length:

449

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

1.67706

Exp number, first 60 AAs:

0.41892

Total prob of N-in:

0.07243

outside

1  -  449

 

 

Pi

80.240386

Theta

112.90211

Tajima's D

-0.810127

CLR

433.290654

CSRT

0.179491025448728

Interpretation

Uncertain