Gene

KWMTBOMO07917

Annotation

PREDICTED:_alkaline_nuclease_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):10034064-10038509      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.486 PlasmaMembrane   Reliability : 2.095

CDS

ATGGCGCTATTTATTTTTCTGATAATCACCTATACAGTGACAGTTATTTCCTGGCACATAGAACTTCCGGAGCCAAGCCGTTTCGCATTTGATCTCAATGAAGACGATTTTGAAGACTATCTGGACTCGTGGTTAGAAATAGAAGAAAGAAAGTGGCAAATTAATGACAGGGCTACTCCTGCAACAGGCTGCGCATTTAAAGTCAATGGGGATCTAGGCGAACCCCAGCCGGTGTATCTACGAGGTAGCAATTACATAATTCCAACAGGAACAACAGGTCAGATCCATCTGAGTGTTGGAGAACAAATATTTGTCACATGTACAGGGACTAAAAGAGTTATTCAACATCCTAACGTTACTTCGTCAACTAGCTCTGGTCTCGCCACTTGCGTCAGCAATACGCTAGTTTCTGGTAACGACTGGTTCCATGGCCACAGTGAATTTAGAAACATCACATGCTCAGGTCATTCACGGTATGAAGCTCAGGCTACATCAGAAACATGCTATGGAAATAATACTGTTATCAGGGTCGGTTTCGTTATAAACAATTTTTTCTATCCATTGTACTGGTCATGCTTTGACCAGAACCGCCTGGAGGTTTTATATGCGTGGTACGAGCAGAATCCCCCCAATGCAGTTCACCAAACAGGAGTTACCAGACCTAGCTGGTTAGCTGGAGGTTTTTTCCCTGGGGTCTCCGTCAATACAATGTACACGCAAGCTCAACAAAAAACTATACTAGCGTCCCTCGTGGGTACAGAACTTGCTGGCAAATACATTACAAATTCACAACATATGGCCCGTGGCCACCTCGCCGCGAAAACTGACTTCATTTTTGCTACTGGTCAGCGAGCCACGTTTTTTTTCATCAATGCCGCCCCTCAGTGGCAACCATTTAATGCGGGTAACTGGAACTCGCTTGAACAGGTAGGTTATTATTAA

Protein

MALFIFLIITYTVTVISWHIELPEPSRFAFDLNEDDFEDYLDSWLEIEERKWQINDRATPATGCAFKVNGDLGEPQPVYLRGSNYIIPTGTTGQIHLSVGEQIFVTCTGTKRVIQHPNVTSSTSSGLATCVSNTLVSGNDWFHGHSEFRNITCSGHSRYEAQATSETCYGNNTVIRVGFVINNFFYPLYWSCFDQNRLEVLYAWYEQNPPNAVHQTGVTRPSWLAGGFFPGVSVNTMYTQAQQKTILASLVGTELAGKYITNSQHMARGHLAAKTDFIFATGQRATFFFINAAPQWQPFNAGNWNSLEQVGYY

Uniprot

A0A2W1BP50   A0A2A4JNR7   A0A194Q8S9   A0A2A4JML0   F6K708   A0A0N1IIN7   + More
B7VCC3   A0A219LVV6   A0A2A4JP76   B7VCC2   A0A0N1IB53   A0A2W1BYI3   A0A194RKW6   A0A2H1WP54   A0A2H1W493   Q08JX1   A0A1E1WMF9   A0A194Q8R2   A0A2H1V3T5   A0A219LVU7   A0A0L7KR40   A0A219LVV5   A0A219LVV4   A0A2H1WT12   A0A0L7LLE8   A0A0N1ICG2   A0A2A4JKE1   A0A0N1II16   A0A2W1BV74   H9JIU6   A0A219LWI3   A0A2P8ZMT4   A0A194Q7A2   A0A0N1PH39   A0A182RUK6   A0A1J1IDA7   A0A182WDU5   A0A1L8DXI7   A0A182FVL7   W5JEZ9   A0A2J7Q4N1   A0A182QZC1   A0A336LKP8   A0A1L8DPN4   A0A182M5I5   A0A1L8DXM9   A0A182IU94   A0A0L0BQR2   A0A2W1B9N6   A0A3S2NR20   A0A182YBI8   W8BUZ2   A0A182N3S5   W8BEM3   A0A067RF87   A0A182HW09   A0A1B0CE89   A0A182T2U1   A0A0A1WJV0   Q7QK21   A0A182JWX9   A0A182WUG9   A0A182PHB8   A0A0N0PDC8   A0A182M6U5   A7UR43   W5JF80   A0A219LVW0   A0A1W4UQR3   A0A182WQS2   A0A1I8P1L8   A0A182V706   B3M7Q7   A0A0K8U675   A0A182QLU4   A0A034WII0   A0A182J459   A0A182VCF7   B4IFY0   A0A034W8A8   A0A182HW10   A0A0K8VA92   A0A0L0CAN6   A0A2M4BML1   A0A182PHB7   W5JDC0   A0A084WAC8   Q176L0   A0A1S4FDC9   A0A0J9RZ63   A0A182RUK5   A0A1A9WA99   A0A182YBI7   A0A182JWY0  

Pubmed

28756777    26354079    17244546    26227816    19121390    29403074    + More
20920257    23761445    26108605    25244985    24495485    24845553    25830018    12364791    14747013    17210077    17994087    25348373    24438588    17510324    22936249   

EMBL

KZ149944    PZC76832.1    NWSH01000988    PCG73224.1    KQ459299    KPJ01928.1    + More
PCG73221.1    HM357845    AEA76311.1    KQ460202    KPJ17191.1    FM253096    CAR92522.1    KM229550    AKB95589.1    PCG73222.1    FM253095    CAR92521.1    KPJ17193.1    PZC76833.1    KQ460045    KPJ18059.1    ODYU01009979    SOQ54756.1    ODYU01006163    SOQ47776.1    AB254196    BAF33251.1    GDQN01002889    JAT88165.1    KPJ01927.1    ODYU01000364    SOQ35022.1    KM229544    AKB95583.1    JTDY01007018    KOB65521.1    KM229545    AKB95584.1    KM229551    AKB95590.1    ODYU01010450    SOQ55574.1    JTDY01000675    KOB76267.1    KQ458751    KPJ05311.1    NWSH01001168    PCG72289.1    KQ459986    KPJ18843.1    KZ149927    PZC77534.1    BABH01023166    KM229547    AKB95586.1    PYGN01000014    PSN57821.1    KQ459580    KPI99275.1    KQ460396    KPJ15353.1    CVRI01000047    CRK98271.1    GFDF01002907    JAV11177.1    ADMH02001680    ETN61460.1    NEVH01018378    PNF23542.1    AXCN02001098    UFQT01000005    SSX17321.1    GFDF01005662    JAV08422.1    AXCM01003118    GFDF01002908    JAV11176.1    JRES01001600    KNC21579.1    KZ150242    PZC71898.1    RSAL01000132    RVE46356.1    GAMC01009439    JAB97116.1    GAMC01009438    JAB97117.1    KK852672    KDR18788.1    APCN01001456    AJWK01008671    GBXI01015003    JAC99288.1    AAAB01008804    EAA03867.4    KPJ15345.1    EDO64808.1    ETN61459.1    KM229549    AKB95588.1    CH902618    EDV40985.1    GDHF01030469    JAI21845.1    GAKP01004820    JAC54132.1    CH480834    EDW46567.1    GAKP01008410    JAC50542.1    GDHF01016597    JAI35717.1    JRES01000760    KNC28514.1    GGFJ01005093    MBW54234.1    ADMH02001556    ETN62076.1    ATLV01022092    ATLV01022093    ATLV01022094    KE525328    KFB47172.1    CH477386    EAT42072.1    CM002912    KMZ00475.1   

Proteomes

UP000218220    UP000053268    UP000053240    UP000037510    UP000005204    UP000245037    + More
UP000075900    UP000183832    UP000075920    UP000069272    UP000000673    UP000235965    UP000075886    UP000075883    UP000075880    UP000037069    UP000283053    UP000076408    UP000075884    UP000027135    UP000075840    UP000092461    UP000075901    UP000007062    UP000075881    UP000076407    UP000075885    UP000192221    UP000095300    UP000075903    UP000007801    UP000001292    UP000030765    UP000008820    UP000091820   

PRIDE

B7VCC3    B7VCC2    Q08JX1    H9JIU6   

Pfam

PF01223   Endonuclease_NS        + More
PF09243   Rsm22
PF16923   Glyco_hydro_63N
PF03200   Glyco_hydro_63

Interpro

IPR001604   DNA/RNA_non-sp_Endonuclease        + More
IPR040255   Non-specific_endonuclease       
IPR020821   Extracellular_endonuc_su_A       
IPR015324   Ribosomal_Rsm22-like       
IPR029063   SAM-dependent_MTases       
IPR038518   Glyco_hydro_63N_sf       
IPR031631   Glyco_hydro_63N       
IPR008928   6-hairpin_glycosidase_sf       
IPR012341   6hp_glycosidase-like_sf       
IPR031335   Glyco_hydro_63_C       
IPR004888   Glycoside_hydrolase_63       

SUPFAM

SSF53335   SSF53335        + More
SSF48208   SSF48208       

Gene 3D

1.50.10.10     2.70.98.110    

ProteinModelPortal

A0A2W1BP50   A0A2A4JNR7   A0A194Q8S9   A0A2A4JML0   F6K708   A0A0N1IIN7   + More
B7VCC3   A0A219LVV6   A0A2A4JP76   B7VCC2   A0A0N1IB53   A0A2W1BYI3   A0A194RKW6   A0A2H1WP54   A0A2H1W493   Q08JX1   A0A1E1WMF9   A0A194Q8R2   A0A2H1V3T5   A0A219LVU7   A0A0L7KR40   A0A219LVV5   A0A219LVV4   A0A2H1WT12   A0A0L7LLE8   A0A0N1ICG2   A0A2A4JKE1   A0A0N1II16   A0A2W1BV74   H9JIU6   A0A219LWI3   A0A2P8ZMT4   A0A194Q7A2   A0A0N1PH39   A0A182RUK6   A0A1J1IDA7   A0A182WDU5   A0A1L8DXI7   A0A182FVL7   W5JEZ9   A0A2J7Q4N1   A0A182QZC1   A0A336LKP8   A0A1L8DPN4   A0A182M5I5   A0A1L8DXM9   A0A182IU94   A0A0L0BQR2   A0A2W1B9N6   A0A3S2NR20   A0A182YBI8   W8BUZ2   A0A182N3S5   W8BEM3   A0A067RF87   A0A182HW09   A0A1B0CE89   A0A182T2U1   A0A0A1WJV0   Q7QK21   A0A182JWX9   A0A182WUG9   A0A182PHB8   A0A0N0PDC8   A0A182M6U5   A7UR43   W5JF80   A0A219LVW0   A0A1W4UQR3   A0A182WQS2   A0A1I8P1L8   A0A182V706   B3M7Q7   A0A0K8U675   A0A182QLU4   A0A034WII0   A0A182J459   A0A182VCF7   B4IFY0   A0A034W8A8   A0A182HW10   A0A0K8VA92   A0A0L0CAN6   A0A2M4BML1   A0A182PHB7   W5JDC0   A0A084WAC8   Q176L0   A0A1S4FDC9   A0A0J9RZ63   A0A182RUK5   A0A1A9WA99   A0A182YBI7   A0A182JWY0  

KEGG

NA   

GO

GO:0046872   GO:0016787   GO:0003676   GO:0004519   GO:0006412   GO:0008168   GO:0004521   GO:0006309   GO:0000737   GO:0005743   GO:0005739   GO:0004529   GO:0000014   GO:0009311   GO:0016021   GO:0004573   GO:0006468   GO:0004713   GO:0007169   GO:0016020   GO:0016876   GO:0043039  

PANTHER

PTHR13966   PTHR10412  

SignalP

Position:   1 - 17,         Likelihood:  0.703222

 

 

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

12.97507

Exp number, first 60 AAs:

12.84691

Total prob of N-in:

0.66915

POSSIBLE N-term signal

sequence

outside

1  -  313

 

 

Pi

177.592809

Theta

174.675858

Tajima's D

0.30544

CLR

0.25559

CSRT

0.455827208639568

Interpretation

Uncertain