Gene

KWMTBOMO07907

Pre Gene Modal

BGIBMGA000971

Annotation

hypothetical_protein_KGM_05069_[Danaus_plexippus]

Location

Bomo_Chr13(+):9861440-9864529      View in EpiBrowser

Full name

GDT1 family protein      

Location in the cell

Cytoplasmic   Reliability : 1.427 Mitochondrial   Reliability : 1.835

CDS

ATGAGTTTCGGACTACCACCCCTTAAAGTAAAGCCAGAACATGATGACAATGGTGTCAAGATTCAAGAAAATACTTTTGGTATCCGTGACCCCATGATTGCCGGTTTAGGTGCCACAAGACCTAAACTAGGTTTTGTACATCCACTAGAAGCATCTGAGAAAAATTACCATTTAAATGAAGAGAAACTGAATCTAGCGATGCTGCGCAATGTCCAAGGTCTACATGCGCCAATGAAAATTACAATGGAGAGGAAGTTTGCGAGTAAGGTTGGACGTCTACCCTTTCTGCCCAGTTCTAATCTCCAACATGATGTTTTAACTGGCAGATACATAGATATTGGTTTTGAAGACATTCTCAACACACGTGATCTATGTGAAACTGCCGGTCAGCCACACGCTGTCATAGAGAGATCACTTGGACTTCTTTAA

Protein

MSFGLPPLKVKPEHDDNGVKIQENTFGIRDPMIAGLGATRPKLGFVHPLEASEKNYHLNEEKLNLAMLRNVQGLHAPMKITMERKFASKVGRLPFLPSSNLQHDVLTGRYIDIGFEDILNTRDLCETAGQPHAVIERSLGLL

Similarity

Belongs to the GDT1 family.

Uniprot

H9IUP1   A0A3S2NF57   A0A212F4I0   S4PBG8   A0A0N1IPN7   I4DJF8   + More
A0A2W1BT66   A0A2H1X3E3   A0A2A4J375   A0A194QEP4   K7J0V8   A0A232FER6   A0A0L7RE63   A0A0C9QA84   A0A088AT33   A0A026WFA5   A0A0J7L914   E9ICG6   E2C785   E2AY56   A0A310S7G3   A0A154P8A0   A0A195FJU8   A0A158P2N6   A0A151WZP5   A0A2A3EG94   A0A1W4W516   J3JV59   A0A1B6KIQ1   D2A1N4   A0A1Y1K784   A0A195BU73   N6TIC4   A0A0T6AYX7   A0A195D345   A0A1B6HKM2   A0A1B6GJ43   A0A195E4H2   A0A1Y1KAZ1   A0A1S3I039   H2ZS72   A0A3B4DWN6   A0A3B4DWI2   A0A1W5AL11   A0A0P7UQ64   A0A0K8TSK9   Q6DGT9   U4TXB6   E6ZIC3   A0A1L8FV29   A0A3B1JRU8   A0A3B4A256   Q6DES1   A0A1A8N4J1   A0A3B5BJ35   E3TDM6   A0A3B5BDG5   A0A1A8ISX0   A0A1A8CJG7   A0A1A8TXZ4   A0A2I4CL50   A0A0B7B2A6   W5M1P4   N6UK05   A0A146P5W2   A0A3Q2PVR8   A0A1A8SAP1   A0A1A7XTT2   A0A3Q2CBC3   Q28D35   A0A0E9WJT9   R4WDU8   A0A2P8ZCS9   H2SDN3   W5M1R0   A0A1A8PYW3   A0A3B4WYY9   A0A3B4TTZ1   A0A3Q1K9I6   E3TG75   A0A1A8H525   A0A3B5L7Y7   A0A3P9P2U4   A0A3P9P2R3   M3ZVR4   A0A3B3X028   A0A3P9P2P7   A0A3B5Q958   A0A2U9CVY6   A0A3Q3ECB8   A0A3Q3L734   A0A3Q3BJN6   A0A3Q1FDL2   A0A3P9GZJ3   A0A3P9GZJ5   D6R700   G3NBV2   A0A3B3CD36   H2LNB1   A0A0K8RHU1  

Pubmed

19121390    22118469    23622113    26354079    22651552    28756777    + More
20075255    28648823    24508170    30249741    21282665    20798317    21347285    22516182    18362917    19820115    28004739    23537049    9215903    26369729    23594743    27762356    25329095    25463417    20634964    20431018    25613341    23691247    29403074    21551351    23542700    17554307    29451363   

EMBL

BABH01000741    BABH01000742    RSAL01000063    RVE49511.1    AGBW02010357    OWR48645.1    + More
GAIX01005917    JAA86643.1    KQ460202    KPJ17201.1    AK401426    BAM18048.1    KZ149944    PZC76825.1    ODYU01013160    SOQ59853.1    NWSH01003540    PCG66138.1    KQ459299    KPJ01936.1    NNAY01000332    OXU29152.1    KQ414609    KOC69267.1    GBYB01011333    JAG81100.1    KK107250    QOIP01000002    EZA54366.1    RLU26188.1    LBMM01000233    KMR03566.1    GL762293    EFZ21730.1    GL453340    EFN76198.1    GL443762    EFN61652.1    KQ773364    OAD52388.1    KQ434844    KZC08156.1    KQ981523    KYN40279.1    ADTU01007112    KQ982639    KYQ53256.1    KZ288254    PBC30757.1    BT127125    AEE62087.1    GEBQ01028645    JAT11332.1    KQ971338    EFA01520.2    GEZM01090240    JAV57319.1    KQ976408    KYM91169.1    APGK01025388    KB740588    ENN80169.1    LJIG01022537    KRT80053.1    KQ976885    KYN07330.1    GECU01032466    JAS75240.1    GECZ01007328    JAS62441.1    KQ979657    KYN19976.1    GEZM01090239    JAV57320.1    AFYH01246649    AFYH01246650    AFYH01246651    JARO02002872    KPP71725.1    GDAI01000500    JAI17103.1    BX649570    BC076250    AAH76250.1    KB631697    ERL85437.1    FQ310508    CBN81807.1    CM004476    OCT75436.1    BC077023    AAH77023.1    HAEF01012613    HAEG01000583    SBR63787.1    GU588456    ADO28412.1    HAED01014002    HAEE01007898    SBR00447.1    HADZ01015991    HAEA01006428    SBP79932.1    HADY01010207    HAEJ01000527    SBS40984.1    HACG01040574    CEK87439.1    AHAT01003323    APGK01030257    KB740765    ENN79012.1    GCES01147636    GCES01147157    JAQ39165.1    HAEI01012235    SBS14704.1    HADW01020132    HADX01006715    SBP21532.1    AAMC01075855    AAMC01075856    CR855731    KV460365    CAJ81620.1    OCA19819.1    GBXM01017950    JAH90627.1    AK417983    BAN21198.1    PYGN01000101    PSN54304.1    HAEH01009060    SBR86169.1    GU589361    ADO29311.1    HAEB01008242    HAEC01010332    SBQ78548.1    CP026263    AWP20865.1    HM124737    ADF97599.1    GADI01003123    JAA70685.1   

Proteomes

UP000005204    UP000283053    UP000007151    UP000053240    UP000218220    UP000053268    + More
UP000002358    UP000215335    UP000053825    UP000005203    UP000053097    UP000279307    UP000036403    UP000008237    UP000000311    UP000076502    UP000078541    UP000005205    UP000075809    UP000242457    UP000192223    UP000007266    UP000078540    UP000019118    UP000078542    UP000078492    UP000085678    UP000008672    UP000261440    UP000192224    UP000034805    UP000000437    UP000030742    UP000186698    UP000018467    UP000261520    UP000261400    UP000192220    UP000018468    UP000265000    UP000265020    UP000008143    UP000245037    UP000005226    UP000261360    UP000261420    UP000265040    UP000221080    UP000261380    UP000242638    UP000002852    UP000261480    UP000246464    UP000261660    UP000264800    UP000257200    UP000265200    UP000007635    UP000261560    UP000001038   

PRIDE

H9IUP1   

Pfam

PF05348   UMP1        + More
PF01169   UPF0016

Interpro

IPR008012   Ump1        + More
IPR001727   Gdt1       

ProteinModelPortal

H9IUP1   A0A3S2NF57   A0A212F4I0   S4PBG8   A0A0N1IPN7   I4DJF8   + More
A0A2W1BT66   A0A2H1X3E3   A0A2A4J375   A0A194QEP4   K7J0V8   A0A232FER6   A0A0L7RE63   A0A0C9QA84   A0A088AT33   A0A026WFA5   A0A0J7L914   E9ICG6   E2C785   E2AY56   A0A310S7G3   A0A154P8A0   A0A195FJU8   A0A158P2N6   A0A151WZP5   A0A2A3EG94   A0A1W4W516   J3JV59   A0A1B6KIQ1   D2A1N4   A0A1Y1K784   A0A195BU73   N6TIC4   A0A0T6AYX7   A0A195D345   A0A1B6HKM2   A0A1B6GJ43   A0A195E4H2   A0A1Y1KAZ1   A0A1S3I039   H2ZS72   A0A3B4DWN6   A0A3B4DWI2   A0A1W5AL11   A0A0P7UQ64   A0A0K8TSK9   Q6DGT9   U4TXB6   E6ZIC3   A0A1L8FV29   A0A3B1JRU8   A0A3B4A256   Q6DES1   A0A1A8N4J1   A0A3B5BJ35   E3TDM6   A0A3B5BDG5   A0A1A8ISX0   A0A1A8CJG7   A0A1A8TXZ4   A0A2I4CL50   A0A0B7B2A6   W5M1P4   N6UK05   A0A146P5W2   A0A3Q2PVR8   A0A1A8SAP1   A0A1A7XTT2   A0A3Q2CBC3   Q28D35   A0A0E9WJT9   R4WDU8   A0A2P8ZCS9   H2SDN3   W5M1R0   A0A1A8PYW3   A0A3B4WYY9   A0A3B4TTZ1   A0A3Q1K9I6   E3TG75   A0A1A8H525   A0A3B5L7Y7   A0A3P9P2U4   A0A3P9P2R3   M3ZVR4   A0A3B3X028   A0A3P9P2P7   A0A3B5Q958   A0A2U9CVY6   A0A3Q3ECB8   A0A3Q3L734   A0A3Q3BJN6   A0A3Q1FDL2   A0A3P9GZJ3   A0A3P9GZJ5   D6R700   G3NBV2   A0A3B3CD36   H2LNB1   A0A0K8RHU1  

KEGG

101737354    K11599 proteasome maturation protein | (RefSeq) proteasome maturation protein

PATHWAY

03050    Proteasome - Bombyx mori (domestic silkworm)

GO

GO:0043248   GO:0000502   GO:0005634   GO:0005737   GO:0016021  

PANTHER

PTHR12828   PTHR12608  

Subcellular location

Membrane  

Length:

142

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.01372

outside

1  -  142

 

 

Pi

55.326339

Theta

138.400953

Tajima's D

-1.053353

CLR

278.209748

CSRT

0.130893455327234

Interpretation

Uncertain