SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07904
Pre Gene Modal
BGIBMGA001183
Annotation
PREDICTED:_vascular_endothelial_growth_factor_receptor_1_isoform_X1_[Bombyx_mori]
Full name
Receptor protein-tyrosine kinase      
Location in the cell
Nuclear   Reliability : 1.91
 

Sequence

CDS
ATGAGACAGACATCCGATTCCGAGTACCCTTTTGAGACAATTATAAACATATATAACGTCGACGAATACGCTATAGGCTATTATGCATGTTTTGATGATGTAAAAACAAACTTTACCTTAAATAATCTCATAGAAGAGCCGAGAAACACAGAGAACGCTTCTTTTATTTACATTTACGTTGAGGGATCAGATAGTCTGATTGCACCGATGAGAGAAATTGTTGTACCAAGAGACTGTTCTAAGATTGTAATAGAATGTAGACCGACAACACCAGACGTCAATGTCACGCTTTCATCGGAAATTCCAGACTATTACTACCCGTCATTTCGATACAGTCCAAAAATTGGTTTTGTACCTGAGAACTCTATGCCCTCAGATGATCAAATCATTAGCTTTGTACTATGCGAATTTGTAAGAGGAGAAACACGGATTGAGAAATATATTTATGTTTCAAAACGTAGGTCTGGTTTCAATTGCACCGGACAACGTGGAAATCAATCTAAGTGGAAACTCATACGTAATATTAAAAAACCTCCAAAACCAAAGGTTGCAGGTGGACATAAACAATTTTTAGAAGGTGAAACATTTACAATACACTGCCGTGTACCAAATGATGGATTAATTAATTTCAAATGGAAGTATCCTCCTGAAGTTACCAATGACTCAGTGGAAGTATCTGTGGTCAAGACTGAAGCTACGACTACTGGTTCAATAGTTTATCAGAATATTACTATCCGAAATGCTACCAAGAAACACAATGGAGTATACACCTGCCTTTTAACGAATACTTGTGGAGAGGAGAAAGATGAGTTCAGGAAAATATTTTTAGAAAAACCTTTTTTATCGCTGAGAGATCTAGCGAAAGGTAAACTTATGGGAAATGCAAATAAATCCATTAATATTGTCATTGAGATTGAAGCGTATCCCCCAGTTGAAAGGACACATTTCTTAAAAAACGATAAATATTTACCATCAAATGATTTGAAATACAACGTAACCACATTAGCTAATGGAGATCCTAAACTTCGTATTAACGATTTGAAACTGACCGACATTGCCAACTATACTTTAGTAGCGGAGAATAAATACTTGACGAAGAATTATACCGTGGATCTTAGAGTTTTCACAAAACCTGAAGCTAAACTGTTAAATAATAGGATCATTAAACGTCTTGAGAATTCAGAGATGAACTTTGCGTGCAAAGTTACAGGTTATCCTTTACCAGACGTAACCTGGATTTTTTCTAATGACGAGGAGCATGAACTGTCATCCACGAAATCAGAGCAAGAGTCTTTGTATGCGAAAACGGATTATCTCAAAATATCAGTGCAAGCTTCTGGTGTCATAACTTGTAATGCACACAACTCCAAGGGGGAATATTTTGACAGCAGCACACTTTTAGTTTATGAAATAAACAATGGATTTGGTATATTACAGCCATTAGAAAATTGGTATTCAGAAAAAGACAGTGCCAGAAAGAAATGCTTGGCTTCGGTTTACGATTATGATAATGTTTCTTGGTTGGGAAGCGACGGTAATATATTGGATGACATAGTTGAATATTCAAACAGCACATTTTCGCATATAGCTACGTTAACATTAGATCCGATTTCAATGGAGCACACAGGCACTTACATATGTCGAGGTTTAAGGAAGAACTCCACAGAGGCAGACTTTCAAAATATAACAATAACCGTTGCGGAGTTGTTGGCGCCAATAATCAGAGAACCGGATTCCAATAAAGATGAAGAAGCAATGGAGGGTCGTTCAATACAATTGCATTGTGAAGCTGAAGGTGTTCCTCGACCAACAATCTATTGGTATAAGGATGACGAACTCATTTCTAATAATTCTGGATACAAATTATTTGTTGACATAGTAAACCACACGATTGTAAATTCGACATTTGAAATTGAAAATATGCAGGAAAAAGACAACGGAATATATGAATGTGTGGCTTTGAATAATGCTAGTGAATTAAGAAGAGCTTACACACTCGTACTTAAAGCCGAGAAATCCTACACACCCTATGTTATTGTCACCGCGGTGATTATTTTAGTACTCCTCGGTATGGTGGCGTATCTATTTACGTGGAAATTGAAAAAACAAAGGGAATTGACTAAAGCGGGTCTTTTAAATTTCAAAAGTGGTAATAAGAAATCATTCAATCCCAATTTGGGAATTGATGAACAAGCAGATCTATTACCTTACGATGAAAAATTCGAGTTTCCCCGCGAAAAATTAACATTTGGGAAGCAATTAGGTGCTGGTGCATTCGGCGTAGTCTATAAAGCCGAAGCTCGTGGTATAATCAATGCTGAAGTAACAACTCCAGTCGCCGTGAAGATGGTGAAAAGAACTGCAGATAACATGTATATCAAAGCCTTAGCATCGGAACTCAAAATAATGGTGCATCTCGGAAAACACGTCAACATCGTGAATTTACTGGGAGCCTGTACGAAACATATTGCAAAGCGCGAGTTGATAGTTATAGTAGAATATTGCAAATACGGAAACATTCACAACTACATGCAGAAGCACAGAGAAGTGTTTATAGATCAGCTAACTGACAACGCAGAAAAGAATCTCGGGAAAATCAATAAAGGATTCCTCAACAGCGTCGGTACCACGGGAACACATTCGGATTACTTCAGCTCCGGCAACACAAAAGATACTGATCATTCGTTGCTATATTCCGGGAATTCAAAGAGATCTGGTAGGAAAGTTTCGGAAGGGTACATCCAGCAGGAGTGGCAAACTAAATATGAAGGCGACTACATCTATGAGTGTCACCAGCCACGGCCGCTTACATCAGGTCACCTGCTTGGCTGGGCTTTCCAAATAGCACGAGGAATGGAATATCTTGCTAACAGAAAGGTTCTTCATGGAGATTTGGCGGCAAGAAATGTTTTGTTAGCCGATGATAACGTAGTCAAGATATGTGACTTCGGACTCGCAAGAAGTATGTACAATAACGAAGAATATCAAAAGAAGGAAAACAGCCCTCTACCGGTGAAATGGTTAGCCATCGAATGTATGGTTGACAGGATATTTTCGACCCAATCCGATGTTTGGTCCTACGGAATCGTGCTTTGGGAGATGTTTTCTTTAGCAAAGACTCCGTACCCTAACATAAGTCCCACTGACTTACTGCGTTGGCTCTCTGATGGTAATCGATTGGAGAAACCACCATTTGCGGATGATCGTCTCTACAATGTCATGCTGCGATGTTGGCATCAGAAGCCCACCGCGCGACCTTCGTTCACAGAGCTGCAGGAAATATTAGGAAACTTCCTTGAAGACAACGAACGCAATCGCTACGTTGATCTGAACGCACCGTACAATGAAATGAACGCCGAACTCATGACGGGGGAAGACTATCTCGCGATGGTTTGTGCACCGGATTACAACAATATCGTAACACCGAGCCCCAACTACGTCAATATGGCAAAGAGTTTCTTCCCGGCTACACCCACTCCTAAAGATCAAGAAGGCTATTTACCAATGAGCCCTACATCGGATCAAACGAAGTACATGGCTCACGGAACTAAGTTTGACTTCGATTCTAGAAAGCTCAATCCTAGAGTATCGGAAGCTAGTAACGTTGGTTCAGTAATAACCCCCCTGTTAGATTTAAACAACCTTCCAGCGAGAAGCGGATCAGAATCTGATCATGAAAACAATGCCTCGACGTACCTTGACAAATGTATTGACGACAAAAAATCTGACGAAGTGTTTGAAATGAAACAAACAAACACGAAAAATCCACAGGACAATAGTGCAGTGACGAATCCTACCTATTATACATTCGACGTTGAAAACGAGAAGAAGCCAAAAGAAATAGCTAACCCTTATGTTAATTTTGCCAACGGCTCGACTGTTCACTTAAAATAG
Protein
MRQTSDSEYPFETIINIYNVDEYAIGYYACFDDVKTNFTLNNLIEEPRNTENASFIYIYVEGSDSLIAPMREIVVPRDCSKIVIECRPTTPDVNVTLSSEIPDYYYPSFRYSPKIGFVPENSMPSDDQIISFVLCEFVRGETRIEKYIYVSKRRSGFNCTGQRGNQSKWKLIRNIKKPPKPKVAGGHKQFLEGETFTIHCRVPNDGLINFKWKYPPEVTNDSVEVSVVKTEATTTGSIVYQNITIRNATKKHNGVYTCLLTNTCGEEKDEFRKIFLEKPFLSLRDLAKGKLMGNANKSINIVIEIEAYPPVERTHFLKNDKYLPSNDLKYNVTTLANGDPKLRINDLKLTDIANYTLVAENKYLTKNYTVDLRVFTKPEAKLLNNRIIKRLENSEMNFACKVTGYPLPDVTWIFSNDEEHELSSTKSEQESLYAKTDYLKISVQASGVITCNAHNSKGEYFDSSTLLVYEINNGFGILQPLENWYSEKDSARKKCLASVYDYDNVSWLGSDGNILDDIVEYSNSTFSHIATLTLDPISMEHTGTYICRGLRKNSTEADFQNITITVAELLAPIIREPDSNKDEEAMEGRSIQLHCEAEGVPRPTIYWYKDDELISNNSGYKLFVDIVNHTIVNSTFEIENMQEKDNGIYECVALNNASELRRAYTLVLKAEKSYTPYVIVTAVIILVLLGMVAYLFTWKLKKQRELTKAGLLNFKSGNKKSFNPNLGIDEQADLLPYDEKFEFPREKLTFGKQLGAGAFGVVYKAEARGIINAEVTTPVAVKMVKRTADNMYIKALASELKIMVHLGKHVNIVNLLGACTKHIAKRELIVIVEYCKYGNIHNYMQKHREVFIDQLTDNAEKNLGKINKGFLNSVGTTGTHSDYFSSGNTKDTDHSLLYSGNSKRSGRKVSEGYIQQEWQTKYEGDYIYECHQPRPLTSGHLLGWAFQIARGMEYLANRKVLHGDLAARNVLLADDNVVKICDFGLARSMYNNEEYQKKENSPLPVKWLAIECMVDRIFSTQSDVWSYGIVLWEMFSLAKTPYPNISPTDLLRWLSDGNRLEKPPFADDRLYNVMLRCWHQKPTARPSFTELQEILGNFLEDNERNRYVDLNAPYNEMNAELMTGEDYLAMVCAPDYNNIVTPSPNYVNMAKSFFPATPTPKDQEGYLPMSPTSDQTKYMAHGTKFDFDSRKLNPRVSEASNVGSVITPLLDLNNLPARSGSESDHENNASTYLDKCIDDKKSDEVFEMKQTNTKNPQDNSAVTNPTYYTFDVENEKKPKEIANPYVNFANGSTVHLK

Summary

Catalytic Activity
ATP + L-tyrosyl-[protein] = ADP + H(+) + O-phospho-L-tyrosyl-[protein]
Similarity
Belongs to the protein kinase superfamily. Tyr protein kinase family.
Feature
chain  Receptor protein-tyrosine kinase
EC Number
2.7.10.1
EMBL
BABH01000757    BABH01000758    BABH01000759    BABH01000760    ODYU01006658    SOQ48699.1    + More
NWSH01000776    PCG74295.1    KQ460205    KPJ16974.1    AGBW02007800    OWR54541.1    PCG74296.1    KQ459299    KPJ01940.1    KZ150488    PZC70700.1    GEZM01086327    JAV59544.1    GEZM01086330    JAV59539.1    GL453340    EFN76191.1    GBYB01008688    JAG78455.1    GBYB01008689    JAG78456.1    GEDC01007845    JAS29453.1    GEZM01086328    JAV59542.1    KQ971338    EFA01963.2    GEDC01023959    JAS13339.1    KYB27872.1    QOIP01000002    RLU26184.1    NNAY01000332    OXU29151.1    GEDC01028037    GEDC01002092    JAS09261.1    JAS35206.1    KQ414609    KOC69261.1    GGMS01007370    MBY76573.1    ABLF02025832    ABLF02025833    KZ288254    PBC30758.1    GGMR01008172    MBY20791.1    ADTU01007113    AAZO01000078    DS234991    EEB09955.1    KQ976885    KYN07332.1    KQ981523    KYN40276.1    GAMC01019813    GAMC01019812    GAMC01019809    JAB86742.1    GL888375    EGI62038.1    GAMC01019814    GAMC01019810    JAB86741.1    CH963852    EDW75439.2    KA647105    AFP61734.1    CM000157    KRJ97849.1    KT355587    ALV82506.1    KQ979657    KYN19979.1    KRJ97837.1    GANO01002507    JAB57364.1    CM002910    KMY89000.1    KRJ97841.1    AE014134    BT050546    AAO41166.2    ACJ13253.1    GAKP01017990    GAKP01017986    JAC40962.1    KMY88998.1    GAKP01017993    GAKP01017989    JAC40959.1    ACZ94200.1    GAKP01017988    GAKP01017987    JAC40964.1    GAKP01017991    JAC40961.1    AY079184    AAL91089.1    OUUW01000004    SPP79791.1    SPP79788.1    KMY89001.1    GDHF01015491    JAI36823.1    SPP79793.1    GDHF01018081    JAI34233.1    GGFL01004160    MBW68338.1    GECZ01028801    JAS40968.1    JXJN01002751    JXJN01002752    JXJN01002753    GGFL01001962    MBW66140.1    GECZ01007777    JAS61992.1    GGFL01005342    MBW69520.1    GBHO01005277    JAG38327.1    GBHO01005275    JAG38329.1    GGFJ01000938    MBW50079.1    GGFL01001960    MBW66138.1    GDHC01016887    JAQ01742.1    GGFL01001963    MBW66141.1    GBHO01031436    JAG12168.1    GBHO01005279    JAG38325.1    GGFJ01001218    MBW50359.1    SPP79792.1    GFDL01000398    JAV34647.1    GFDL01000446    JAV34599.1    GFDL01000396    JAV34649.1    GFDL01000443    JAV34602.1    GFDL01000416    JAV34629.1   
Pfam
PF07679   I-set        + More
PF00047   ig
PF07714   Pkinase_Tyr
PF01545   Cation_efflux
PF13895   Ig_2
PF07686   V-set
Interpro
IPR000719   Prot_kinase_dom        + More
IPR036179   Ig-like_dom_sf       
IPR008266   Tyr_kinase_AS       
IPR003598   Ig_sub2       
IPR017441   Protein_kinase_ATP_BS       
IPR013783   Ig-like_fold       
IPR013151   Immunoglobulin       
IPR003599   Ig_sub       
IPR007110   Ig-like_dom       
IPR001245   Ser-Thr/Tyr_kinase_cat_dom       
IPR013098   Ig_I-set       
IPR001824   Tyr_kinase_rcpt_3_CS       
IPR011009   Kinase-like_dom_sf       
IPR009136   VEGFR2_rcpt       
IPR002524   Cation_efflux       
IPR027469   Cation_efflux_TMD_sf       
IPR013106   Ig_V-set       
SUPFAM
SSF56112   SSF56112        + More
SSF48726   SSF48726       
SSF161111   SSF161111       
Gene 3D

Ontologies

Topology

Length:
1297
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
26.68544
Exp number, first 60 AAs:
0.02927
Total prob of N-in:
0.18625
outside
1  -  675
TMhelix
676  -  698
inside
699  -  1297
 
 

Population Genetic Test Statistics

Pi
219.360452
Theta
175.183666
Tajima's D
0.663272
CLR
0.485041
CSRT
0.566871656417179
Interpretation
Uncertain
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