Gene

KWMTBOMO07898

Annotation

PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]

Location

Bomo_Chr13(+):9610529-9614361      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.577 Nuclear   Reliability : 1.843

CDS

ATGACTGTGACACAAAAGGCAGGAAGTGTTGTAGCGTCCGTGTACGACCGTGAGAGTGATGATAGGTATTTGCATTTACGGCCTATTTTCAAAATTCAAGTTCTCGGTAAACAGGGTACTGCACTTATAGATACAGCAGCTAAGCATTGTATTGCTGGTCACACGCTGTATGCTCTCCTTCTGCATAAGGGTCACCCTCTTACTCCCTCCACTAGGCGAGTCAAACTTGCTGATGGGCATGTTCGGAATATGGATGTATTGACAACCATATTACCAGTGAGGTTAGAACACATAGTGATTAATATTCCATTTATAATCTTCCCTGATTCTAATGATAATGAAACTTTACTGGGTATTGATTTTATTAATGCTGCCAAAGTTATTATTGATTTTCATCGTCATGAATGGTATTTTAGTACTGATGCTAAGGTGCATTATAAATTACTTTTTGAACCTATGTCTCGTGGTGTGTGCATAGCTTCTACTAACATGCTTCGGGATGATGAAGGCATGCACTTGCAATCAGCTGAGCGCCAAGCATTGTCTGAGTTCCTTATTCGGCATGAAAGTATTTTTACAGCAGGGGGAGGTCCGACACCATTCATAGAACATTGCATAGACACCGGAGATCACCCCCCGATAGCTGTGCCGCCCTATCGCCTTAACCCTTCCAAGAAGGAGACGATGAAGAATGGAATAGAGAAGATGCTGGCAGATGACATCATTGAAGAGTGCGAATCCGCCTGGTGCTCTCCTGCATTGATGATACCGAAGTCCAATGGTAATGTAAGATTCTGCGTGGATTACAGGCGCTTAAATGAAGTAACCAAATCGGATACTTACCCACTCCCACGCATTGATGATCTTCTCCAGAGTACGAAGAAGAATTGTTACATGACCACAATAGACCTTCGTTCTTCATATTGGCAAGTTATGGTCCGAGAAGCAGACAGAGACAAAACAGCTTTTGTCTGCCCCCTAGGCACTTACCGTTTTAAAAGAATGCCGTTCGGCTTGAAGAATGCGCCGGCGACTTTCCAAAGGCTTATTGATCGTCTACGCTCCTGTGCTGCTTTGAAGGATGTTACAGTACTTGCTTATCTAGACGATTTGTTAATTATTTCAGAAGGATTCCAGCAACACCTACAAGATCTGGAAGCTGTTTTTAGTCGTTTGTCTGAATTTAAACTTCACGTAAACAGAGAGAAGTGCACTTTTGCCAAAGAAAGGGTCCGTTATCTGGGCCACGTCATCACTCCAGACGGTGTGTCTCCTGACCCTGAGAAGGTCAGTGCTGTCCTTAATATGCTGGAACCATCTAACCTAAAACATTTAAAAACTTTTCTCCAAACATGCTCTTGGTTCAGGAAGTTTATTCCAAACTTTTCAAAGATAGCAGAACCGCTTACTCGACTGACCAAGAAGAATTACACATGGAGCTGGGGACCTGAACAAACACAGGCATTCAAAGAATTGAAGCGTCTGCTGACCACGGCGCCCGTACTTGTTCAAGCGAATTTTAAACAACCCTTAGTACTGCGTACCGACGCGAGCAACTATGCACTTGGCGCAGTTTTAGCTCAAGGGGAAGGCAAGGACGAAAGGCCTATCGAGTATGCTAGCCGCCTACTCACCGCAGCGGAGCGCAACTACTCTACTACAGAACGGGAAGCGCTTGCTGTAGTCTGGGCCGTGGAGCGTTTCAGGCCATACCTCGACGGCCAACCAATTATTATAGGCAGTGATCACCAACCCTTGCGTTGGTTGCTTTCTTTAAAGTCTCCTGCTGGTAGGTTGGTCCGTTGGGCGCTTAAACTCCAAGAATTTGACATCAGATTCGAGTACACCCCAGGAAAAGCTAACGTTGTCGCTGACACGTTAAGTAGACCGATCTGTTCCAACGAAACACAAAATAACTGCGGCATCTGTTCTGTCATTTGCGACCTGCCCACCAAGTCACCTACCCAGTTACGTCAAGACCAGTTGACTGATCCGGAAATACAGAAGATCGTCACAGAACTGGAAGGAGTGGATGAACTTGCTGCTAAAAGATGGTCAGAAAGAGGATTTCTAATGGAACAAGGTGTTTTATATCGACTTAATCCGGATTCTGATGCCGAGGCCCCACAATTAGTCATTCCTGCCCATCAAGTGACCGACGTTCTCAAAGAGCTTCACGATGCCCCTACCGCTGGACATGCAGGAATTGACCGGACTTACCAACAAGTCTCACGTCTGTTCTACTTCACAGGAATAAGAAGAATCATAACCGACTATGTAAAGGCATGTATCCATTGTCAACGCTATAAGGCTGCTAATACCAAGCCTCCAGGTCTATTGCAGACGCCGGTGATGAACCAGCGCAACGAAGTCTTGGCAGTTGATCTTTTCGGCCCGTTGCCACCTGGAAAACAGGGGGAGCGTTGGATCTTGCTTATAGAAGATACTGCTACGAGGTGGACAGAACTTTTCCCATTAAAGGAAGCTACTGCTGAGGCGTGTGCACATGTCCTCATAGAGGAGTATTTTATGAGGTTTGGTCTTCCACGCCGACTAGTTTCTGATAATGGCGTACAATTTATTTCGGCAGTCATGCGTCAATGCATGTCCATCCTGGGGATAAAGCAAAACCTTATCCCTCTCTATCACCCAGAAGCAAACCCCGCCGAACGTAAAAACAGAGATCTTAAGACTTTATTAGCACAACTCGTGGAATGTGACCACACTTCCTGGCCAAACATGTTACCAGTGATTCGATTCGCTCTTAATAACGCTAAATGTCGCACCACAGGTATGTCACCTGCTTACTTGTCATTTGGCAGAGAGATGAGGTCCCCCACAGAAGTCACCCATGACCTTCGTGCTGTTCTAGACAAAGATAACTTTGTTCCCCAAATAACTCCCTATCTCAGGAAATTTGTTAACTCCTTTTCAGCGGTGCGCGAACGTGTAGAGACGCTTCAAGATAAAGCTAAAGGGTATGCTGATCGTTCGAGACGGCCCATTGAAACATTCAACGAAGGTGACATGGTTCTCATCAAATCACATGTCCTCAGTAAGAGCGCTAATGGCCTTGCTTCTAAGTTTGTTCCAAAACGCGATGGTCCGTATCGCATCGTTAAAAAGGTCAGCCCTACTACTTACCACGTCGCGCATGTTGACAAACCTGATGAAGTTTTAGGGAAATATCATGTGAACGATCTCACTCTATACCGTGAGAATCAGAGTGATGCTCTTCCGCGGCCGGTGATGCCTAAAAAGAAACGTGGTCGTCCCCCAAATAATGTTAAAACAGATTCTCGAGTTCCAGGGCATATGACGACACGGCATGCTGAACCATGTGCTGAAGCTCCACGTCTTTCTCCCGCAGCTGGTGGTATGGTTGGTCTTGCGCCTGTCCCTCAGCCCAGTAGTAATGAGATGCTAGTCCAGGAGCGAGGGCGTCCTCCAGGACTAGAGGGGGAGTATGTAGCAAACCGACCGGTACGTCACTCTCGCGGCCGTATGCCCGCTCGCTATACATAG

Protein

MTVTQKAGSVVASVYDRESDDRYLHLRPIFKIQVLGKQGTALIDTAAKHCIAGHTLYALLLHKGHPLTPSTRRVKLADGHVRNMDVLTTILPVRLEHIVINIPFIIFPDSNDNETLLGIDFINAAKVIIDFHRHEWYFSTDAKVHYKLLFEPMSRGVCIASTNMLRDDEGMHLQSAERQALSEFLIRHESIFTAGGGPTPFIEHCIDTGDHPPIAVPPYRLNPSKKETMKNGIEKMLADDIIEECESAWCSPALMIPKSNGNVRFCVDYRRLNEVTKSDTYPLPRIDDLLQSTKKNCYMTTIDLRSSYWQVMVREADRDKTAFVCPLGTYRFKRMPFGLKNAPATFQRLIDRLRSCAALKDVTVLAYLDDLLIISEGFQQHLQDLEAVFSRLSEFKLHVNREKCTFAKERVRYLGHVITPDGVSPDPEKVSAVLNMLEPSNLKHLKTFLQTCSWFRKFIPNFSKIAEPLTRLTKKNYTWSWGPEQTQAFKELKRLLTTAPVLVQANFKQPLVLRTDASNYALGAVLAQGEGKDERPIEYASRLLTAAERNYSTTEREALAVVWAVERFRPYLDGQPIIIGSDHQPLRWLLSLKSPAGRLVRWALKLQEFDIRFEYTPGKANVVADTLSRPICSNETQNNCGICSVICDLPTKSPTQLRQDQLTDPEIQKIVTELEGVDELAAKRWSERGFLMEQGVLYRLNPDSDAEAPQLVIPAHQVTDVLKELHDAPTAGHAGIDRTYQQVSRLFYFTGIRRIITDYVKACIHCQRYKAANTKPPGLLQTPVMNQRNEVLAVDLFGPLPPGKQGERWILLIEDTATRWTELFPLKEATAEACAHVLIEEYFMRFGLPRRLVSDNGVQFISAVMRQCMSILGIKQNLIPLYHPEANPAERKNRDLKTLLAQLVECDHTSWPNMLPVIRFALNNAKCRTTGMSPAYLSFGREMRSPTEVTHDLRAVLDKDNFVPQITPYLRKFVNSFSAVRERVETLQDKAKGYADRSRRPIETFNEGDMVLIKSHVLSKSANGLASKFVPKRDGPYRIVKKVSPTTYHVAHVDKPDEVLGKYHVNDLTLYRENQSDALPRPVMPKKKRGRPPNNVKTDSRVPGHMTTRHAEPCAEAPRLSPAAGGMVGLAPVPQPSSNEMLVQERGRPPGLEGEYVANRPVRHSRGRMPARYT

Uniprot

A0A224XHC7   A0A2L2Y6Q3   A0A1Y1NDK0   D7EM19   A0A3B3IK80   A0A224X632   + More
A0A3B5R366   A0A0V0G672   L7LYQ9   L7LYP4   L7LV95   V5I839   L7ML53   A0A1E1XKD7   L7LWL7   A0A3B1JJM2   A0A3P9MP57   L7MAW1   A0A0J7K8R1   L7LW11   A0A139W930   A0A3B3BX27   A0A3B5QFT0   A0A147BPL7   A0A224XHI1   A0A023EY78   A0A224XHE2   A0A096XIB4   A0A1E1X293   A0A1B6IL28   A0A147BUF5   A0A2R5L8F2   A0A3B3SLA7   A0A147BLY7   A0A0J7KPJ7   A0A2R5LEZ4   A0A147BJI2   A0A1Y1MZ56   A0A131XQ77   A0A0J7K4Z4   L7MEQ5   A0A146TD60   L7MFA7   A0A1Z5L5G8   A0A1Y1LZS5   A0A147BST7   A0A1Y1JVH7   L7MKE1   A0A2R5LP11   L7LY95   L7LV55   L7MMB3   A0A0J7KA76   L7MCS8   A0A131XRN7   L7MA76   A0A1E1XL81   A0A3P8Q5A9   L7MAT3   A0A131XL91   A0A1Y1MED9   W8B595   A0A0A9XMW3   L7LW12   A0A0J7KA70   A0A090XDG5   A0A023EY81   A0A087UDP9   A0A0J7K9T8   A0A1Y1NGJ5   H3A4B4   A0A147BIK4   L7LVQ9   A0A164KLJ0   A0A087SUZ9   A0A224XGU7   A0A0A9Z8Q1   A0A087TFE2   A0A0J7KF66   A0A087TFA8   A0A087U8V5   A0A087TH40   A0A164P0I2   A0A087TUL9   A0A087U9J6   A0A1Y1JW20   A0A087TRB6   A0A087U713  

Pubmed

26561354    28004739    18362917    19820115    17554307    23542700    + More
25576852    29209593    25329095    29451363    29652888    25474469    28503490    29240929    28528879    28049606    24495485    25401762    25970599    9215903   

EMBL

GFTR01008566    JAW07860.1    IAAA01017336    LAA03833.1    GEZM01007731    JAV94970.1    + More
KQ972234    EFA12514.2    GFTR01008489    JAW07937.1    GECL01003261    JAP02863.1    GACK01009040    JAA55994.1    GACK01009041    JAA55993.1    GACK01009043    JAA55991.1    GALX01005355    JAB63111.1    GACK01000334    JAA64700.1    GFAA01003652    JAT99782.1    GACK01009042    JAA55992.1    GACK01004027    JAA61007.1    LBMM01011454    KMQ86828.1    GACK01009039    JAA55995.1    KQ972733    KXZ75794.1    GEGO01002704    JAR92700.1    GFTR01008516    JAW07910.1    GBBI01004690    JAC14022.1    GFTR01008424    JAW08002.1    KF925840    AHN53418.1    GFAC01005811    JAT93377.1    GECU01030157    GECU01020076    JAS77549.1    JAS87630.1    GEGO01001242    JAR94162.1    GGLE01001609    MBY05735.1    GEGO01003620    JAR91784.1    LBMM01004568    KMQ92283.1    GGLE01003869    MBY07995.1    GEGO01004488    JAR90916.1    GEZM01020516    GEZM01020515    JAV89256.1    GEFM01006999    JAP68797.1    LBMM01013676    KMQ85528.1    GACK01002722    JAA62312.1    GCES01095459    JAQ90863.1    GACK01003086    JAA61948.1    GFJQ02004522    JAW02448.1    GEZM01046053    JAV77555.1    GEGO01001548    JAR93856.1    GEZM01099479    JAV53309.1    GACK01000363    JAA64671.1    GGLE01007069    MBY11195.1    GACK01009195    JAA55839.1    GACK01009547    JAA55487.1    GACK01000610    JAA64424.1    LBMM01010645    KMQ87338.1    GACK01004001    JAA61033.1    GEFM01006971    JAP68825.1    GACK01004074    JAA60960.1    GFAA01003693    JAT99741.1    GACK01003909    JAA61125.1    GEFH01002290    JAP66291.1    GEZM01035170    GEZM01035168    JAV83378.1    GAMC01021623    GAMC01021621    JAB84934.1    GBHO01041895    GBHO01025146    GBHO01025145    GBHO01025144    GBHO01025143    GBHO01014600    GBHO01014569    JAG01709.1    JAG18458.1    JAG18459.1    JAG18460.1    JAG18461.1    JAG29004.1    JAG29035.1    GACK01009237    JAA55797.1    LBMM01010896    KMQ87169.1    GBIH01000760    JAC93950.1    GBBI01004634    JAC14078.1    KK119366    KFM75488.1    LBMM01010852    KMQ87188.1    GEZM01005662    GEZM01005661    JAV96000.1    AFYH01233110    GEGO01004785    JAR90619.1    GACK01009357    JAA55677.1    LRGB01003288    KZS03371.1    KK112080    KFM56688.1    GFTR01008624    JAW07802.1    GBHO01002002    GBHO01001990    JAG41602.1    JAG41614.1    KK114971    KFM63831.1    LBMM01008414    KMQ88902.1    KK114965    KFM63797.1    KK118759    KFM73794.1    KK115210    KFM64429.1    LRGB01002748    KZS06406.1    KK116803    KFM68808.1    KK118857    KFM74035.1    GEZM01099475    JAV53313.1    KK116393    KFM67655.1    KK118517    KFM73152.1   

Proteomes

UP000007266    UP000001038    UP000002852    UP000018467    UP000265180    UP000036403    + More
UP000261560    UP000261540    UP000265100    UP000054359    UP000008672    UP000076858   

PRIDE

L7MCS8   

Pfam

PF17921   Integrase_H2C2        + More
PF00665   rve
PF17917   RT_RNaseH
PF00078   RVT_1
PF03732   Retrotrans_gag
PF17919   RT_RNaseH_2
PF09668   Asp_protease
PF00077   RVP

Interpro

IPR012337   RNaseH-like_sf        + More
IPR001584   Integrase_cat-core       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR041373   RT_RNaseH       
IPR000477   RT_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR001878   Znf_CCHC       
IPR041577   RT_RNaseH_2       
IPR005162   Retrotrans_gag_dom       
IPR001969   Aspartic_peptidase_AS       
IPR003034   SAP_dom       
IPR036875   Znf_CCHC_sf       
IPR001995   Peptidase_A2_cat       
IPR019103   Peptidase_aspartic_DDI1-type       
IPR018061   Retropepsins       

SUPFAM

SSF50630   SSF50630        + More
SSF53098   SSF53098       
SSF57756   SSF57756       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A224XHC7   A0A2L2Y6Q3   A0A1Y1NDK0   D7EM19   A0A3B3IK80   A0A224X632   + More
A0A3B5R366   A0A0V0G672   L7LYQ9   L7LYP4   L7LV95   V5I839   L7ML53   A0A1E1XKD7   L7LWL7   A0A3B1JJM2   A0A3P9MP57   L7MAW1   A0A0J7K8R1   L7LW11   A0A139W930   A0A3B3BX27   A0A3B5QFT0   A0A147BPL7   A0A224XHI1   A0A023EY78   A0A224XHE2   A0A096XIB4   A0A1E1X293   A0A1B6IL28   A0A147BUF5   A0A2R5L8F2   A0A3B3SLA7   A0A147BLY7   A0A0J7KPJ7   A0A2R5LEZ4   A0A147BJI2   A0A1Y1MZ56   A0A131XQ77   A0A0J7K4Z4   L7MEQ5   A0A146TD60   L7MFA7   A0A1Z5L5G8   A0A1Y1LZS5   A0A147BST7   A0A1Y1JVH7   L7MKE1   A0A2R5LP11   L7LY95   L7LV55   L7MMB3   A0A0J7KA76   L7MCS8   A0A131XRN7   L7MA76   A0A1E1XL81   A0A3P8Q5A9   L7MAT3   A0A131XL91   A0A1Y1MED9   W8B595   A0A0A9XMW3   L7LW12   A0A0J7KA70   A0A090XDG5   A0A023EY81   A0A087UDP9   A0A0J7K9T8   A0A1Y1NGJ5   H3A4B4   A0A147BIK4   L7LVQ9   A0A164KLJ0   A0A087SUZ9   A0A224XGU7   A0A0A9Z8Q1   A0A087TFE2   A0A0J7KF66   A0A087TFA8   A0A087U8V5   A0A087TH40   A0A164P0I2   A0A087TUL9   A0A087U9J6   A0A1Y1JW20   A0A087TRB6   A0A087U713  

PDB

4OL8     E-value=3.0254e-72,     Score=696

KEGG

105841953    no KO assigned | (RefSeq) uncharacterized LOC105841953

GO

GO:0003676   GO:0015074   GO:0008270   GO:0005634   GO:0008233   GO:0003964   GO:0004190   GO:0016021   GO:0005515   GO:0046872   GO:0006418   GO:0004819   GO:0006425   GO:0006412   GO:0016876   GO:0043039  

Length:

1174

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0650199999999997

Exp number, first 60 AAs:

0.01371

Total prob of N-in:

0.00320

outside

1  -  1174

 

 

Pi

169.673688

Theta

149.960327

Tajima's D

-0.775061

CLR

0

CSRT

0.181390930453477

Interpretation

Uncertain