SGID The Silkworm Genome Information Database
Gene
KWMTBOMO07882
Pre Gene Modal
BGIBMGA004176
Annotation
PREDICTED:_uncharacterized_protein_LOC106716298_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 2.982
 

Sequence

CDS
ATGGCAACCCTTATCCAATGTGCGGGATGCCTCGATAAAATAAAGGACACGCCGTTCTTGCGCTGTTCCCGTTGTGATGCCGTATTTCACCACTCCTGCTTGAATATTTCCTTGAAGGATTATGCTGCCATGACCAATGAAATCAAAGCTGTCTGGTTGTGCGTGTTATGTTGTAGCAGGGACCGAAAGGGGGGCGACAATTCTGACACACCAGTTCGAGTGGCGTCCACTCCGCAACACGATTATGTCACCCACCGTACCAAAACTCGCGTGGTCGACCATAGCTCTTCTTGTATGTCAGCTGAGGGGATCCGTGACATTATTCGAGAGGAGCTACAGAACTTGTTTAAGATGAGTTTCCTGCCCAAGCTAATGGAAGTTCAGAACGCTGTGTCAACCTTGGAATCTTCGCTATCATTCTTTAACGAAGAATTGGAAAGGATCAGATCTGTGCAGGGTGTTCAATCTGCAACAATGAAACAATTGGAGCGAGAATGTGAAGATCTCCGTGTGAACAATCGCGGTCTTATGGCCAAAGTTGCTTTTCTGGATCAACAGTCGCGGTCCTCCAATATCGAGATCCAGTGTGTTCCTGAGCACAAGCAGGAGAACTTAATGAACATCGTGCAACAGTTGGGAAGAACAATAAAGTGTGCTATCGGCGAGAATAGTATCCAACACTGTTCGAGAATGGCTAAATTAAACAGCACTAGTCCCCGTCCCCGGTCTATACTCGTAAGATTCAATAGCCAACGCCTTCGTGACGAGTTCCTGGCATGTACAACCAAGTTCAACAAAAGCAACCAGAATGACAAACTGAATACTAGTCACCTAGGTATCGGTGGAAATAAGAAATCCGCAATCTACGTTGCTGAGCACCTAAGTCCTGAAAATAAGGCACTTCATGCCGCAGCCCGCACCAAGGCAAAAGAACTGAACTACAGGTACGTGTGGGTGCGAGATGGACGCATCTACATGCGCAAAAATGACGAAAAGCTTGAAGCGTGCCCAGATCCACTCTCGGTTATTGATCCTCTTCATCCTCCACTACAGTTCTGTGTTACTCTTGAGTGCTCTGAGTCCTTACTGCCAATATGCTCTTCTAAATTACACTTTTACAAAGCAGACTATAACAAAATTGTTAGTGACTTAAGTGCTATCCCATGGGAGGATGAATTGACGGCCTGTGCTACGGTTGATGATATGGTCGCAAGTGGAGACACCGGCATGGTGAAGAACTATAGGCCTATCTCCATTCTAACGGTTTTTGCTAAAGTTTTCGAAATGGTGTTGTATCCCGTTTTGTCTTGGCATTTTAGACAGATTTTTGCTACGGAGCAGCATGGGTTCATTAAGGCAAGATCCACAACTACGAACTTGATGTCCTTTGTCGAGGACTTGACTCAAGGTGTTGACCATGGAGATTCATTAGACACTATATACACAGATTTTAGTAAGGCCTTCGACAGAGTTAACCACAATTTACTGCTGTCGAAGCTGTCATCGTACGGGATTGCTGGTACACTTTTGCATTGGCTTCAATCATATTTAACGAACAGATCGTCCACGGTTGTTGCGGGGGGTCACTCGTCGATGTCCTTCCCAGTTTTGTCTGGGGTTCCCCAAGGCTCTCATTTGGGTCCTCTACTTTTTAATGCATTCATCAACGACATTGGCTCGTGTTTTCGTAGCACAAAGTTCTATATGTTCGCCGACGACTTAAAATTCTTCAGGAAAGTAAACTCATCTCTTGACTCTGAATTATTGCAGAGGGATTTGGACAGTTTGTTTGGCTGGTGCAGTGCGAATGGCATGAGTCTGAATATCAGTAAATGCTATGTAATTCGTTTTACTAGAAAAAGACGCTCATTTTCCCGAACGTATCATATTAATGGTGCACCACTATCTGAGGTAGACTCTATTAGGGATCTGGGTGTGACCATTGATAGTAAGCTGCAATTCAGCACACATATTCAGAATATTACCAGAAAGAGCTTTAAAACATTGGGATTTATATTTCGCAATTGCAAAGATTTCAAAAAACCAAACACTAAGATCACAATTTATAATGCTCTCGTACGCAGTACCTTGGAATATTGCTGCATTGTGTGGAATCCTTACTATGAAATATACAAGAAACGATTGGAAAGTGTCCAGAAACGGTTTTTATGGTACTTATCTTACAACTACAATCTGGGTAGGAAGTTACCCAGCTATGAAGATAGACTTTGCCACTTTAATTTAGACTCTCTTCTAAACCGGAGAAAACTAATGGGGGGTATATTTCTGTACAAACTAATTCATGGAATAACCGACACACCTAATCTATTAGCCCAGATAAAAATATCAGCCCCTAAGTACCAACCAAGAACGAAGAAATATAAACCGTTTATAAGAAAGCCCGCTCGTTCGAATTTAGGTGCTTACTCTCCCTTAAACAGAATCCTTTGGGACTACAATAATGTCCACGGTAGCGCGGTCTCCGTCAATGTTCCTTCGGAGTTGTCCGATTGCGCTGAACTTATTTTAAGTGAAATAGATGTTTTTTCAAATTGTCTCACTACTTACAGGAAAAATCTGTCGCGGATCATCTCCCAATTAAATTAA
Protein
MATLIQCAGCLDKIKDTPFLRCSRCDAVFHHSCLNISLKDYAAMTNEIKAVWLCVLCCSRDRKGGDNSDTPVRVASTPQHDYVTHRTKTRVVDHSSSCMSAEGIRDIIREELQNLFKMSFLPKLMEVQNAVSTLESSLSFFNEELERIRSVQGVQSATMKQLERECEDLRVNNRGLMAKVAFLDQQSRSSNIEIQCVPEHKQENLMNIVQQLGRTIKCAIGENSIQHCSRMAKLNSTSPRPRSILVRFNSQRLRDEFLACTTKFNKSNQNDKLNTSHLGIGGNKKSAIYVAEHLSPENKALHAAARTKAKELNYRYVWVRDGRIYMRKNDEKLEACPDPLSVIDPLHPPLQFCVTLECSESLLPICSSKLHFYKADYNKIVSDLSAIPWEDELTACATVDDMVASGDTGMVKNYRPISILTVFAKVFEMVLYPVLSWHFRQIFATEQHGFIKARSTTTNLMSFVEDLTQGVDHGDSLDTIYTDFSKAFDRVNHNLLLSKLSSYGIAGTLLHWLQSYLTNRSSTVVAGGHSSMSFPVLSGVPQGSHLGPLLFNAFINDIGSCFRSTKFYMFADDLKFFRKVNSSLDSELLQRDLDSLFGWCSANGMSLNISKCYVIRFTRKRRSFSRTYHINGAPLSEVDSIRDLGVTIDSKLQFSTHIQNITRKSFKTLGFIFRNCKDFKKPNTKITIYNALVRSTLEYCCIVWNPYYEIYKKRLESVQKRFLWYLSYNYNLGRKLPSYEDRLCHFNLDSLLNRRKLMGGIFLYKLIHGITDTPNLLAQIKISAPKYQPRTKKYKPFIRKPARSNLGAYSPLNRILWDYNNVHGSAVSVNVPSELSDCAELILSEIDVFSNCLTTYRKNLSRIISQLN

Summary

Uniprot
ProteinModelPortal
PDB
6AR3     E-value=8.32552e-07,     Score=130

Ontologies

Topology

Length:
868
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.37637
Exp number, first 60 AAs:
0.00019
Total prob of N-in:
0.00517
outside
1  -  868
 
 

Population Genetic Test Statistics

Pi
196.808881
Theta
139.157024
Tajima's D
-0.982719
CLR
63.341423
CSRT
0.142142892855357
Interpretation
Uncertain
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