SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07881  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001190
Annotation
PREDICTED:_uncharacterized_protein_LOC106131367_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.834
 

Sequence

CDS
ATGGAAAAAATGATAAATAAGAATCTCATCACCTTAAAATGCGTCCTCTTCTGTTTTCTCTCAGGGGTGGGCTGCATTTTTCCCTTTCTTCCGCTGCACATGCTTTCAGTGGGATTGGATAAAGGCGAAGCTCGTTTGATTTCTGCTGTTTCACCATGCATCGCTTTGCTAGGTCCAGCTATAGTGGGACCACTTATCGACAAATTATCAGTAGGCAGGGGATCGACGGGCGGAAGCGCTGGTAACAGCGGATCAGGTCGACTACTGCGCATCGTAACAGCAACATGCCTTATACTCAGTACTATCTTCTATTCTTTACTTCTCACTGTACCATACACGGAAAGACATGAGGCTCGTCGGCCTCAAGTTCTGTTCATGTGTAATGCGGACAGCGCGTACGTCATGCAAGAAGTTTGCAAAGAGGACATGCGTTGCAATCGTTGGTCAGGTGAGAAGTCAGGAGTACTAGCAGTTGGATCTTGTGAATACGGCTGCGCTGATCCGAACATGACTTGGATCCGCCAGCCATTCACCACCACGTCGACAACCACTACGTTAAGACCCATGTACAACACACTGGTTAACGCTTCGGCACAGACAAATGGCTCCGTTGACGAAGCCGCTCGTGAGAAAACTCACTTCGATTTAAACCCGCCTCACCTGTGTTACAACGGTGAATGTAATGTCTACATGCAACATGTTGCACGTCTGCGTATCCCGTTGTCCTTGATCGCGCCGGATCCGCCCGAGGACAACTCTACTGCTGACTCTAACTGGTGCACTTATCAGACAGCTGGTCCATCAAAGTGCTTGGTTCCGCCAGAACGATTAGCTGAGATGAACCAAGACGATGATTGCACCCCGGCAGTAAGGTGTCAAGTCCTTGACCCATACGATGAACCTGATGGTGTCTTAGCGGATGCTGAATGTAGACTTGTAATAGGAGATCCAACTTCATCATTTTGGGCTTATTTTATTCTCAGATCTATCGCAGACATATGGCCGACTGCCGCATTAGCCCTACTCAGTACAGCGTGTGTGATAGCAACTCGCGAGACCTCGTTGGGTCGAGGTGACGTTGGCAGACAAATCGCCTTCGGTACACTGGGACTGGCTATCTTCCCGCCGCTGGCCGGACTAGCCGCTGATCAAATGCCCGACACCCCATATCTTGTTCCGTTTATTCTACACGCAATCTTCATGATATTGGCTGCCTTAATATTAGTATTTGACAGTCACATGCCACTATCGACGCCGGAATGGTGGTGGCACACGGCGACAGGAGTGTTGGCCCTGCCCATGAATGTGGTGCGCCGGTATGGAGCCGAGACTGCTGCAGTTTTTGTTGTGGTAGCTCTACTGGGCATTCTGTGGAGCGGCATCGACGCATATCTTCCGTGGACCGTTGAGGAGATGAACGGCACATATACTGAAGTGGGGTTGACGCTGACCGCGGGCGCACTTCCAGCCGTGCCGGCGCTCTGGTGGGCCGAAGCACTTGTAGACTACATTGGACACTCCAATGTATTCATCTTAGCTTTTACATTTTACGGACTTCGATACACTGGTTTAGCTAGCAGTAATGAATACAGTTTGGTGGCAGTCTGTGAAATATTGGAAGTGTTTACACTTAGTTTGGTTTGGGTGACTGCAATACTATACTTCCGTCACTTGATTCCTCGCAAGTACACTACTACAGGACAAGCACTACCAGTCATCGCTCATTTCTGTTTAGGACGCTGCATTGGAGCCATTATTAGTGGGATGGTGTCGTTACAGCTGCAATCTGCCCGTGTAACGTATGAAGCCCTTGGTGTAGTTTCCTTGTTGGTAGCAGCTATATATTTGACACTCTATCATTTGTTACTTGCCCCGCGATGTGCAGCTCAAGCAGTCTCTCCGCCTCAACATTTATTACAGGGACTAAATACCAACGGAGCATCGAATGGTACATATTCTCCGATGCGGGTCTACCATGAGGAGAGATCGCGCAAAGGACACTTCCGTTACTAA
Protein
MEKMINKNLITLKCVLFCFLSGVGCIFPFLPLHMLSVGLDKGEARLISAVSPCIALLGPAIVGPLIDKLSVGRGSTGGSAGNSGSGRLLRIVTATCLILSTIFYSLLLTVPYTERHEARRPQVLFMCNADSAYVMQEVCKEDMRCNRWSGEKSGVLAVGSCEYGCADPNMTWIRQPFTTTSTTTTLRPMYNTLVNASAQTNGSVDEAAREKTHFDLNPPHLCYNGECNVYMQHVARLRIPLSLIAPDPPEDNSTADSNWCTYQTAGPSKCLVPPERLAEMNQDDDCTPAVRCQVLDPYDEPDGVLADAECRLVIGDPTSSFWAYFILRSIADIWPTAALALLSTACVIATRETSLGRGDVGRQIAFGTLGLAIFPPLAGLAADQMPDTPYLVPFILHAIFMILAALILVFDSHMPLSTPEWWWHTATGVLALPMNVVRRYGAETAAVFVVVALLGILWSGIDAYLPWTVEEMNGTYTEVGLTLTAGALPAVPALWWAEALVDYIGHSNVFILAFTFYGLRYTGLASSNEYSLVAVCEILEVFTLSLVWVTAILYFRHLIPRKYTTTGQALPVIAHFCLGRCIGAIISGMVSLQLQSARVTYEALGVVSLLVAAIYLTLYHLLLAPRCAAQAVSPPQHLLQGLNTNGASNGTYSPMRVYHEERSRKGHFRY

Summary

EMBL
BABH01000821    BABH01000822    NWSH01000371    PCG76895.1    GAIX01003275    JAA89285.1    + More
ODYU01000854    SOQ36250.1    AGBW02010161    OWR49048.1    KQ459299    KPJ01958.1    KZ149978    PZC75860.1    KQ460205    KPJ16952.1    JTDY01003662    KOB69195.1    GL440062    EFN66330.1    KQ977580    KYN01802.1    GL888243    EGI64096.1    KQ982558    KYQ54989.1    KQ979608    KYN20498.1    KQ981965    KYN31812.1    KK107182    EZA56010.1    QOIP01000003    RLU25078.1    AJVK01022592    NNAY01003136    OXU19924.1    KQ971338    EFA02250.1    GL449898    EFN81848.1    KQ435885    KOX69580.1    KQ414663    KOC65254.1    KQ760801    OAD58960.1    GFDL01006770    JAV28275.1    DS232483    EDS42454.1    GFDL01006879    JAV28166.1    CH477264    EAT45606.1    KZ288315    PBC28322.1    JXUM01114531    KQ565793    KXJ70659.1    GEZM01048872    JAV76312.1    KQ434999    KZC13378.1    ATLV01023969    KE525347    KFB50229.1    UFQS01000229    UFQT01000229    SSX01698.1    SSX22078.1    AAAB01008986    EDO63353.1    APCN01002389    AXCM01001935    NEVH01000597    PNF43577.1    GAKP01013615    GAKP01013614    GAKP01013613    JAC45338.1    GBXI01010513    GBXI01008830    GBXI01006171    JAD03779.1    JAD05462.1    JAD08121.1    GDHF01024840    JAI27474.1    GAMC01009586    JAB96969.1    JXJN01008636    JXJN01008637    CH916366    EDV95695.1    KK852872    KDR14566.1    GFDL01006763    JAV28282.1    ADMH02001988    ETN60069.1    GFDL01006733    JAV28312.1    JRES01000036    KNC34692.1    GEDC01018675    JAS18623.1    CCAG010001557    CH954178    EDV50570.1    CH933809    EDW17462.1    AXCN02001106    OUUW01000012    SPP87593.1    CH480817    EDW50736.1    CH379070    EAL30349.1    CM000363    CM002912    EDX09470.1    KMY97956.1    AE014296    BT133221    AAF50650.1    AAN12077.1    AAN12078.1    AAN12079.1    AFA28462.1    AF239609    AAF63501.1    CM000159    EDW93660.1    CH940647    EDW68506.1    CH902618    EDV41190.1    KPU78987.1    AY128419    AAM75012.1    KB632373    ERL93791.1    KA646543    AFP61172.1    CH964062    EDW78716.2    CH479217    EDW33708.1    GECZ01025131    GECZ01024977    JAS44638.1    JAS44792.1    GECU01037662    GECU01008851    JAS70044.1    JAS98855.1    PNF43576.1    GEBQ01001794    GEBQ01001319    JAT38183.1    JAT38658.1    GECU01006762    JAT00945.1   
Pfam
PF12832   MFS_1_like
Interpro
IPR020846   MFS_dom        + More
IPR036259   MFS_trans_sf       
IPR024989   MFS_assoc_dom       
SUPFAM
SSF103473   SSF103473       

Ontologies

Topology

Length:
670
Number of predicted TMHs:
13
Exp number of AAs in TMHs:
252.79882
Exp number, first 60 AAs:
32.6755
Total prob of N-in:
0.66619
POSSIBLE N-term signal
sequence
outside
1  -  14
TMhelix
15  -  37
inside
38  -  43
TMhelix
44  -  66
outside
67  -  87
TMhelix
88  -  110
inside
111  -  329
TMhelix
330  -  349
outside
350  -  363
TMhelix
364  -  381
inside
382  -  387
TMhelix
388  -  410
outside
411  -  419
TMhelix
420  -  437
inside
438  -  443
TMhelix
444  -  465
outside
466  -  474
TMhelix
475  -  497
inside
498  -  503
TMhelix
504  -  523
outside
524  -  537
TMhelix
538  -  560
inside
561  -  571
TMhelix
572  -  594
outside
595  -  603
TMhelix
604  -  623
inside
624  -  670
 
 

Population Genetic Test Statistics

Pi
236.729827
Theta
176.424784
Tajima's D
0.718199
CLR
0.567287
CSRT
0.580320983950802
Interpretation
Uncertain
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