SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07880  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000956
Annotation
PREDICTED:_uncharacterized_protein_LOC101739643_isoform_X2_[Bombyx_mori]
Location
Bomo_Chr13(+):9063390-9076901      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.24
 

Sequence

CDS
ATGAGTGAAATTATTAAAAGTGAAGGGGCTTGTCCTGCACCAGAAAAGCCGGCTTCTTCGGATGAGAATGTACAATTCCCGCCTTTACCTGAACCAACTGATGAAGATTTTCAGGATGATCTTAACGAAGAAGAAAAAGAATATATCAAAACTAAATTTGCGGACTTGAACACTATTACTTCTCAACGACTACATTGTACAGCTTGTGATCGTCATCTCGGTTCTTCGTCACGTAATTTATCTCGTGTGAAGATTCATCCTTTACTACGAACACTAGTGTGTCAGACATGTCACATCTTTTACAACAGTGGAGAGTTTGAGAAAGGTGATGATGGATCTGAACTTTACTGTCGATGGTGTGGCCAAGGAGGACAAGTATTCTGTTGTTCTGACTGTCCTCATGTTTTTTGTGCGAAATGTATTAAACGGAATTTTGGACAATCAAAAATATTAGAAATTAAATGTGTTGATGATTGGAAATGTTTCAAGTGCAATCCTGAATGCTTAAAACACCTGCGTGCTGTATGTTGGGCTTTGTTTCAATATTGTAAAGCAAGGATTGAAATTGCTACTTATACTGTGGACACTCAAATCAGAGAACTTTTGACGAAACAATGTGCTGCTGATGAATCTTTATGTTGTAAGAATAAAAGTAAAAGAAGTGAAAAATTGGATCCTGTTAAGAAAAAAGAAGAAAATGGCCCTAAAAAACAAACACCTGTACCCATAATATCAAAAATTCCTCCTACTATACAGGTGAAAAAATTTGCATCAATAAACTTGGATGAAACACCAAAGCAAGAAAAAAAACCTATAAAGAGACCAATAAGTCCTAAGAATAAACCAGTTATTGTTAAAAATCCAATTCCAATAGCTACATCAGTTACAAGACTTTTGCATCCATTAAATATTGGACCTCCAATGAAGAAGTTGAGGATTGCAAGTCCAATGATGGGCACCATTAGATATGTGAATGATACCAGAATGCAGTCTTACCAACGATTAAGGCCTAAAGCTCCCATCAATATAAACAATTTCAATGGTTTTAAAAACACAAATCCAATATTCAATCCGATCAGTACAAATTCTTTTCACAATAGCATGGAAAACATGGTCGCCAATGACAACATCAACTTATCTTTGGATAATTTGACTCAGGGCTTGGACATGTCAGCAGCTGCCGCTCTACTGTCAGCAAATAATTCTCAAAATGATGATGTTGTTTGTACACCGGATCTTCCTATGGAATCTTTGAATGAGGTTAATGAAGATAACGACGATGACGTCGAATGTATAACTCCTGGACCTTCAGAGGCACCCAAAACATACAAATTTCAGCATCCCCCACCTCTAGTGCCTTGCGGGAATAATAGTGCAGTGTCTTTATCGTCAGATAATATAATTCAAATGACCGAAAACGACGTCACAGTGAATGCGTTAACAGGCGGCTTGAAGTTTCGGGTTGACCCTCAAACTTTGTCTTCAAATAAAATGTACAGGTTACCGGATGGCCGCGTGTTTGCGATAAACATAAATCCAAAAATGCCCGGTGGCTATTCCGCAACTATTGTAGCTGTAACTGATAATACTAATAAAGCCACACAAAGTAAAGGTACCACATTTGCCGCTAAATTGAGTTCCGTTTCGACTCCGCAATGCTCTTCCCCTGTTACGCCAAAAGCACGAAGAAGCCAACGTCGATCTTCGTCATCAAAACGTAGTTCTACCAAATCTAAAACAACTCGCCAGTCGTCGAGGAAAAGTAGCAGAATGTGTGATTTGAATGTTCCGGTAGAATGGTACAGATATAATCTTATAGACGCAGTTGATGCCTTAGAATACTCATTAAACAGACTACAAAAATTAAAAAAGGAAGCCACAACTATGTATCTTCGAACTAGGACTATTAGCGAAATGAAGAATCTCCATAAAACGTTAGATAGATTATTGACAACGTCATCAAAAAGATTTGGTGAAATCAAAGATAATCTAAGCAATGAGTTGAAACAGTTTATTTTGAGAAAAACAGATAACCAGCCCGCAAATAGTGAAGACGACGACGTTGAAATTTTATCTAATGCTGAAAATGATGATCCCATATTCATAGATGAAAATTCTGTGGAGTCAAATACAAATTATAATGAAAATCAAGAGGTCGATTTGACTGGGCCCGGCAGTAGTGAACATAATGAAACTGGCGAGAAGGAGGACGATTATTCTAGAATGAATGACGAAACTCTAATCATACCAGACCAAGAAAATGAAAGCATTACGAGTATTAATGAAAATGGCCAGAATATAGAAAATAACTCATCTGTTATTGGAGAAGGAGAAACGAGTTTGAAATGTGTTGAAGCCCTGATAGAAACAAACACTACAAACAGTGAAAATAATTCAGTTGATGATTTCAACTTAGAAAATAAGTGCATGGAAAATGAAAAACCTCTAAAAACATTAGAAAGTATAACTGAAAATAATGCGACTACGGGAAATGATAATCGTAATGAATCTAATGAAAGTAACACTGATCTGACTGAGGGTTCAGAAGACAATATCGCTTCTAAAAACCTTAACAGCGAAGCGACGGTCGAAACCAGTTTATCGAATGACACACTCAACTTGGAAAGCGATAAAGTACAGGATTCAGAAATAAGCGAGGAATTGATTGAGTCTTTGTTAAAGGACGATAGCTCTACAAACTGTAAAGATTAG
Protein
MSEIIKSEGACPAPEKPASSDENVQFPPLPEPTDEDFQDDLNEEEKEYIKTKFADLNTITSQRLHCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYNSGEFEKGDDGSELYCRWCGQGGQVFCCSDCPHVFCAKCIKRNFGQSKILEIKCVDDWKCFKCNPECLKHLRAVCWALFQYCKARIEIATYTVDTQIRELLTKQCAADESLCCKNKSKRSEKLDPVKKKEENGPKKQTPVPIISKIPPTIQVKKFASINLDETPKQEKKPIKRPISPKNKPVIVKNPIPIATSVTRLLHPLNIGPPMKKLRIASPMMGTIRYVNDTRMQSYQRLRPKAPININNFNGFKNTNPIFNPISTNSFHNSMENMVANDNINLSLDNLTQGLDMSAAAALLSANNSQNDDVVCTPDLPMESLNEVNEDNDDDVECITPGPSEAPKTYKFQHPPPLVPCGNNSAVSLSSDNIIQMTENDVTVNALTGGLKFRVDPQTLSSNKMYRLPDGRVFAININPKMPGGYSATIVAVTDNTNKATQSKGTTFAAKLSSVSTPQCSSPVTPKARRSQRRSSSSKRSSTKSKTTRQSSRKSSRMCDLNVPVEWYRYNLIDAVDALEYSLNRLQKLKKEATTMYLRTRTISEMKNLHKTLDRLLTTSSKRFGEIKDNLSNELKQFILRKTDNQPANSEDDDVEILSNAENDDPIFIDENSVESNTNYNENQEVDLTGPGSSEHNETGEKEDDYSRMNDETLIIPDQENESITSINENGQNIENNSSVIGEGETSLKCVEALIETNTTNSENNSVDDFNLENKCMENEKPLKTLESITENNATTGNDNRNESNESNTDLTEGSEDNIASKNLNSEATVETSLSNDTLNLESDKVQDSEISEELIESLLKDDSSTNCKD

Summary

Uniprot
A0A2A4JZ25   A0A2H1V631   A0A3S2LG39   A0A194Q963   A0A194RLU0   S4PXB5   + More
Pubmed
26354079    23622113   
EMBL
NWSH01000371    PCG76894.1    ODYU01000854    SOQ36249.1    RSAL01000144    RVE45967.1    + More
KQ459299    KPJ01959.1    KQ460205    KPJ16951.1    GAIX01005328    JAA87232.1   
Proteomes
UP000218220    UP000283053    UP000053268    UP000053240   
Pfam
PF17981   ADD_ATRX
Interpro
IPR017907   Znf_RING_CS        + More
IPR041430   ADD_ATRX       
IPR011011   Znf_FYVE_PHD       
IPR013083   Znf_RING/FYVE/PHD       
IPR025766   ADD       
SUPFAM
SSF57903   SSF57903       
Gene 3D
3.30.40.10    
ProteinModelPortal
A0A2A4JZ25   A0A2H1V631   A0A3S2LG39   A0A194Q963   A0A194RLU0   S4PXB5   + More
PDB
2LD1     E-value=6.93379e-18,     Score=226

Ontologies

KEGG
101739643    no KO assigned | (RefSeq) uncharacterized LOC101739643
GO
GO:0046872  

Topology

Length:
903
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000780000000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00004
outside
1  -  903
 
 

Population Genetic Test Statistics

Pi
182.902271
Theta
158.823593
Tajima's D
0
CLR
137.964857
CSRT
0.370681465926704
Interpretation
Uncertain
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