Gene

KWMTBOMO07878

Pre Gene Modal

BGIBMGA001192

Annotation

PREDICTED:_uncharacterized_protein_LOC101740009_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr13(-):9021202-9026239      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.66

CDS

ATGAATAAATACGCAGTGCTATTTAATTTAAAAAAAATATTAGAATATCGACCGGTTACCACAATTATAAACGCAGAAGGAAAAAATGTACCTAAAAGAAAAAACTTCGAAAACAGAATTACCTTAATTGGTACAGACAATTCAGTTAGTATAATAGATTTAAAAAATGCCCAAAATCTATCGGTAAAACGTGAATTAAAACTTGTAAAAGTTCAAGATGTAGATGTAAAAACTAGACGGCCAATTTACAAGCTGATGACTAATGCAGAATTTCACGAGGAAGAACTTGAAAGACGGAAAGAAAAAAAACTCGCTCGGCAGAACAGTTCAGTTAAAGGCCAGAAATTGATGATTTTGTCATCAAAAATATCTGAACACGATCTAATGACCAGTGTGAGAAAAATGGGAAAATTAGTAGAGAAACAGTATGAAGTTAAAGTAGTTTTAGCAGGTGAAGGAGGACAATCCTCACAAGTATTGGAAAATATATACTCAGTAATAGAGAAAAACACCAAATCAACAGCAAGATTACTACAAAAGAGAAATAAAGGTAATAGTTTAAAGTTTCAATTGCTTCCATTGAACAATGGTAACATGGAAGCATCTCAGTCAGATAATTCAGAAGATGGAAATGACAAAGGTCCGCTATGA

Protein

MNKYAVLFNLKKILEYRPVTTIINAEGKNVPKRKNFENRITLIGTDNSVSIIDLKNAQNLSVKRELKLVKVQDVDVKTRRPIYKLMTNAEFHEEELERRKEKKLARQNSSVKGQKLMILSSKISEHDLMTSVRKMGKLVEKQYEVKVVLAGEGGQSSQVLENIYSVIEKNTKSTARLLQKRNKGNSLKFQLLPLNNGNMEASQSDNSEDGNDKGPL

Similarity

Belongs to the Orn/Lys/Arg decarboxylase class-II family.

Uniprot

H9IVB2   A0A1E1WSU5   A0A2H1V649   S4P9A2   A0A212FDX7   A0A194Q8V8   + More
A0A194RGK3   A0A2A4JYK5   A0A1E1W7Q9   A0A1S4FHU9   Q170L7   A0A182HDL7   A0A023EM14   A0A1Q3FGZ0   A0A1Q3FB53   B0WTV5   V5GLX5   W5J4K6   U4TU79   A0A1Y1KLL8   A0A182FU61   A0A2J7RFU9   A0A182JPL8   A0A182W942   A0A139WJL2   A0A182R143   A0A182VJP7   A0A182KSK8   A0A182HQ48   A0A182XNC7   A0A182MJL2   A0A182Y1R3   Q7Q084   A0A182MYL6   A0A182R5C5   A0A084WHS6   A0A182IPU9   A0A067R6I0   A0A1B0FV17   A0A0A9X1X0   A0A0A9WZW2   U5EQP9   A0A1B6KID3   A0A1J1J0J8   A0A0L0C9I1   A0A1I8NNI0   A0A1B6H431   T1GM17   A0A1B6I0Y1   A0A1B6JZ12   A0A2R7WX13   A0A336K7K6   E2AYT3   A0A1I8NA03   A0A0K8ULY5   T1PH09   A0A1A9WV25   B4MQL0   A0A034VAA8   A0A151WHZ3   C4WXA9   A0A1W4U6L5   A0A1B0ARQ6   A0A2H8TI28   A0A195FA14   A0A3L8DGQ3   A0A0C9RDF6   A0A1A9YET1   A0A232ERW9   B4KTN0   B3MCA4   E9INE1   W8BXI4   A0A3B0J5P3   A0A1A9UW88   A0A195BRD3   A0A2S2N8E6   A0A1B0G9T2   A0A026W1F9   A0A158NWU8   B4LJQ7   B4P5K5   A0A0M4EA15   B4GDN9   A0A0J7L8I0   Q292D7   B4HP87   A0A151IMS9   A0A0J9RAV7   Q4V619   B4JW55  

Pubmed

19121390    23622113    22118469    26354079    17510324    26483478    + More
24945155    20920257    23761445    23537049    28004739    18362917    19820115    20966253    25244985    12364791    24438588    24845553    25401762    26823975    26108605    20798317    25315136    17994087    25348373    30249741    28648823    21282665    24495485    24508170    21347285    17550304    15632085    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356   

EMBL

BABH01000826    GDQN01001006    JAT90048.1    ODYU01000854    SOQ36246.1    GAIX01003829    + More
JAA88731.1    AGBW02009000    OWR51887.1    KQ459299    KPJ01962.1    KQ460205    KPJ16948.1    NWSH01000371    PCG76889.1    GDQN01008069    JAT82985.1    CH477472    EAT40378.1    JXUM01130232    KQ567552    KXJ69377.1    GAPW01003276    JAC10322.1    GFDL01008241    JAV26804.1    GFDL01010230    JAV24815.1    DS232092    EDS34646.1    GALX01005859    JAB62607.1    ADMH02002215    ETN57749.1    KB631661    ERL85114.1    GEZM01080330    JAV62214.1    NEVH01004410    PNF39715.1    KQ971338    KYB28074.1    AXCN02001040    APCN01003292    AXCM01008879    AAAB01008986    EAA00776.4    ATLV01023877    ATLV01023878    KE525347    KFB49770.1    KK852917    KDR13865.1    AJWK01006547    GBHO01040885    GBHO01040883    GBHO01040882    GBHO01035778    GBHO01035773    GBHO01035772    GBHO01035770    GBHO01035768    GBHO01032689    GBHO01029605    GBHO01029600    GBHO01017702    GBHO01012583    GBRD01004695    GBRD01004694    GBRD01004693    JAG02719.1    JAG02721.1    JAG02722.1    JAG07826.1    JAG07831.1    JAG07832.1    JAG07834.1    JAG07836.1    JAG10915.1    JAG13999.1    JAG14004.1    JAG25902.1    JAG31021.1    JAG61126.1    GBHO01029602    GBRD01004692    GDHC01008616    JAG14002.1    JAG61129.1    JAQ10013.1    GANO01004132    JAB55739.1    GEBQ01028802    JAT11175.1    CVRI01000066    CRL05981.1    JRES01000735    KNC28902.1    GECZ01000324    JAS69445.1    CAQQ02075068    GECU01027095    JAS80611.1    GECU01003296    JAT04411.1    KK855576    PTY23175.1    UFQS01000095    UFQT01000095    SSW99355.1    SSX19735.1    GL443983    EFN61446.1    GDHF01024949    JAI27365.1    KA648051    AFP62680.1    CH963849    EDW74399.1    GAKP01019900    JAC39052.1    KQ983106    KYQ47438.1    AK342537    BAH72529.1    JXJN01002528    GFXV01001894    MBW13699.1    KQ981720    KYN37273.1    QOIP01000009    RLU19048.1    GBYB01004996    JAG74763.1    NNAY01002541    OXU21103.1    CH933808    EDW09613.1    CH902619    EDV36204.2    GL764298    EFZ17910.1    GAMC01002578    JAC03978.1    OUUW01000001    SPP75133.1    KQ976417    KYM89592.1    GGMR01000884    MBY13503.1    CCAG010007026    KK107519    EZA49421.1    ADTU01028592    CH940648    EDW60566.2    CM000158    EDW90802.1    CP012524    ALC41846.1    CH479181    EDW31696.1    LBMM01000271    KMR02225.1    CM000071    EAL24925.3    CH480816    EDW47536.1    KQ977019    KYN06259.1    CM002911    KMY93156.1    AE013599    BT022487    AAF58534.2    AAY54903.1    AHN56140.1    CH916375    EDV98193.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000053240    UP000218220    UP000008820    + More
UP000069940    UP000249989    UP000002320    UP000000673    UP000030742    UP000069272    UP000235965    UP000075881    UP000075920    UP000007266    UP000075886    UP000075903    UP000075882    UP000075840    UP000076407    UP000075883    UP000076408    UP000007062    UP000075884    UP000075900    UP000030765    UP000075880    UP000027135    UP000092461    UP000183832    UP000037069    UP000095300    UP000015102    UP000000311    UP000095301    UP000091820    UP000007798    UP000075809    UP000192221    UP000092460    UP000078541    UP000279307    UP000092443    UP000215335    UP000009192    UP000007801    UP000268350    UP000078200    UP000078540    UP000092444    UP000053097    UP000005205    UP000008792    UP000002282    UP000092553    UP000008744    UP000036403    UP000001819    UP000001292    UP000078542    UP000000803    UP000001070   

PRIDE

H9IVB2    Q4V619   

Pfam

PF05198   IF3_N        + More
PF00278   Orn_DAP_Arg_deC
PF02784   Orn_Arg_deC_N
PF07535   zf-DBF
PF00069   Pkinase
PF00615   RGS
PF00707   IF3_C
PF12722   Hid1

Interpro

IPR001288   Translation_initiation_fac_3        + More
IPR036788   T_IF-3_C_sf       
IPR019814   Translation_initiation_fac_3_N       
IPR036787   T_IF-3_N_sf       
IPR000183   Orn/DAP/Arg_de-COase       
IPR022657   De-COase2_CS       
IPR022644   De-COase2_N       
IPR009006   Ala_racemase/Decarboxylase_C       
IPR002433   Orn_de-COase       
IPR022653   De-COase2_pyr-phos_BS       
IPR022643   De-COase2_C       
IPR029066   PLP-binding_barrel       
IPR000239   GPCR_kinase       
IPR000719   Prot_kinase_dom       
IPR036305   RGS_sf       
IPR038545   Znf_DBF_sf       
IPR000961   AGC-kinase_C       
IPR001849   PH_domain       
IPR011009   Kinase-like_dom_sf       
IPR016137   RGS       
IPR008271   Ser/Thr_kinase_AS       
IPR006572   Znf_DBF       
IPR017441   Protein_kinase_ATP_BS       
IPR011993   PH-like_dom_sf       
IPR019815   Translation_initiation_fac_3_C       
IPR026705   Hid-1/Ecm30       

SUPFAM

SSF55200   SSF55200        + More
SSF54364   SSF54364       
SSF51419   SSF51419       
SSF50621   SSF50621       
SSF56112   SSF56112       
SSF48097   SSF48097       

Gene 3D

3.30.110.10     3.10.20.80     2.40.37.10     3.20.20.10     2.30.29.30     3.30.160.680    

ProteinModelPortal

H9IVB2   A0A1E1WSU5   A0A2H1V649   S4P9A2   A0A212FDX7   A0A194Q8V8   + More
A0A194RGK3   A0A2A4JYK5   A0A1E1W7Q9   A0A1S4FHU9   Q170L7   A0A182HDL7   A0A023EM14   A0A1Q3FGZ0   A0A1Q3FB53   B0WTV5   V5GLX5   W5J4K6   U4TU79   A0A1Y1KLL8   A0A182FU61   A0A2J7RFU9   A0A182JPL8   A0A182W942   A0A139WJL2   A0A182R143   A0A182VJP7   A0A182KSK8   A0A182HQ48   A0A182XNC7   A0A182MJL2   A0A182Y1R3   Q7Q084   A0A182MYL6   A0A182R5C5   A0A084WHS6   A0A182IPU9   A0A067R6I0   A0A1B0FV17   A0A0A9X1X0   A0A0A9WZW2   U5EQP9   A0A1B6KID3   A0A1J1J0J8   A0A0L0C9I1   A0A1I8NNI0   A0A1B6H431   T1GM17   A0A1B6I0Y1   A0A1B6JZ12   A0A2R7WX13   A0A336K7K6   E2AYT3   A0A1I8NA03   A0A0K8ULY5   T1PH09   A0A1A9WV25   B4MQL0   A0A034VAA8   A0A151WHZ3   C4WXA9   A0A1W4U6L5   A0A1B0ARQ6   A0A2H8TI28   A0A195FA14   A0A3L8DGQ3   A0A0C9RDF6   A0A1A9YET1   A0A232ERW9   B4KTN0   B3MCA4   E9INE1   W8BXI4   A0A3B0J5P3   A0A1A9UW88   A0A195BRD3   A0A2S2N8E6   A0A1B0G9T2   A0A026W1F9   A0A158NWU8   B4LJQ7   B4P5K5   A0A0M4EA15   B4GDN9   A0A0J7L8I0   Q292D7   B4HP87   A0A151IMS9   A0A0J9RAV7   Q4V619   B4JW55  

KEGG

101740009    K02520 translation initiation factor IF-3 | (RefSeq) uncharacterized LOC101740009

GO

GO:0003743   GO:0003824   GO:0006596   GO:0005739   GO:0043022   GO:0070124   GO:0032790   GO:0008270   GO:0005524   GO:0006413   GO:0003676   GO:0004703   GO:0007165   GO:0043024   GO:0008135   GO:0016020   GO:0006418   GO:0004819   GO:0006425   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR10938   PTHR11482   PTHR21575  

Length:

216

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00051

Exp number, first 60 AAs:

0.00051

Total prob of N-in:

0.04945

outside

1  -  216

 

 

Pi

5.839821

Theta

43.014353

Tajima's D

-2.381177

CLR

7250.594549

CSRT

0.00189990500474976

Interpretation

Possibly Positive selection