Gene

KWMTBOMO07858

Pre Gene Modal

BGIBMGA001205

Annotation

PREDICTED:_ankyrin_repeat?_SAM_and_basic_leucine_zipper_domain-containing_protein_1_[Papilio_polytes]

Location

Bomo_Chr13(-):8536331-8546327      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.824

CDS

ATGGCTCAATTCAGACCAGCCGGATTTTCCGATGAGGATTCAGATAGTGATGATTACGGATTTTATGAGAAGCCGGTTAGAAACTATGACTATTCTAGTCAAATTAGCAGTAAGAAGAAGGTAGAAGTGGCTTTACAGGAAGCTATCATAAACGGAAACATGAAAGATGTAGAGGATCTTATAAATAATGAATTGAAGAACAATGCTAACATAAAATTGGATAGTGGATGGACCCCACTAATGCATGCATGTTTCCATGCTCAAGATAAAATTGTTCAATATTTATTGGAGAAAGATGCAGATCCTAATTTACACTCAGATTCAGTTACACCTATAATGGCTGCATGCTCAAATAGTAGTGCAGATAATGACACAATATACAGTATTGTGTGTAACCTCATAGACAGAAATTGCATACTGAATATTGGAGATAGATATGGACAAACCCCACTAATGAGGGCTATAAGCAGCGGCCGTGTGGCAGTGGCTCAAAAATTACTAGATATGCAAGTTAATATAGAAATGAGGGATCAGCATGGGTGGACAGCTGTTTTCTGGGCTGTCCACCACAATCAACCAGAAATACTAGAAATGTTAATTGAAAAAGGAGCTAGACTAACTGAAGTTGACAAATCGAACCGAACGCTATTAGAAATTGCCAATTGTCATGATCATCAAGTGATAATTGAAATATTAAAGAAATCACTCAACCTAGACGATGATCATAAAACAGATGAAAACTCATACTTAAACCATCAATTAACATCTTGGCAAGATTATTATCCGGGAATTGAGAAAAATGAACGACCGAACTATAAAAACGAAATTCAGAATCTGCTTTACGGCATGAGCTGTGAACGTTTGACGCCCCTGATCGTAACGTCCGGCATCGATTTGAGGACGTTCCTACTGCTGGACGCCGAGGAAATGGTTAAATTAGGTATAGAGATGCCATACGAAAGGCACAGACTGAAATACGGATTACGGAATTTCCATTTGAGAGGATGGAAATTAAACGCGGTGGCCGGTTTGTATGCTCGGAAAATGGATAACTATTGCGTTTTAGACTGTTTAACTTCATTGGGGAGTCATTTACATCAGATTTACATACTAGAGGCCACGCTACAATATATTCTACGCGAGTACGCTAAAGTCGAAAATCAAATAAAACACCAACCTCCGGACTCGCCTTTACTTAAAAAATTGAAAACATCAACAAAGAAAATGCTCACTAACATAAACAGCATACGAAGGGAAATTAAAAGCATGAAAATTACTTTACAGAAGATTGATAGTAATAATCCTCGCCCCGCCGATCTGCTACCAAAGAAGTCAACTCAAGAAATTGCTATCCAATATATCACAAAAGCCGTCTCGCTTTGCTCTCTAGCCTTTATACTATATCAAGGACGAACCTTGTTGGGCAATTTGTTAAAAAAATAA

Protein

MAQFRPAGFSDEDSDSDDYGFYEKPVRNYDYSSQISSKKKVEVALQEAIINGNMKDVEDLINNELKNNANIKLDSGWTPLMHACFHAQDKIVQYLLEKDADPNLHSDSVTPIMAACSNSSADNDTIYSIVCNLIDRNCILNIGDRYGQTPLMRAISSGRVAVAQKLLDMQVNIEMRDQHGWTAVFWAVHHNQPEILEMLIEKGARLTEVDKSNRTLLEIANCHDHQVIIEILKKSLNLDDDHKTDENSYLNHQLTSWQDYYPGIEKNERPNYKNEIQNLLYGMSCERLTPLIVTSGIDLRTFLLLDAEEMVKLGIEMPYERHRLKYGLRNFHLRGWKLNAVAGLYARKMDNYCVLDCLTSLGSHLHQIYILEATLQYILREYAKVENQIKHQPPDSPLLKKLKTSTKKMLTNINSIRREIKSMKITLQKIDSNNPRPADLLPKKSTQEIAIQYITKAVSLCSLAFILYQGRTLLGNLLKK

Uniprot

H9IVC5   A0A194RLR6   A0A194QEU4   A0A2A4JKL9   A0A2A4JM82   A0A2H1VHK0   + More
A0A2H1V2H2   A0A3S2NAN9   A0A212FNF1   A0A1Q3F3M7   A0A0J9R7V9   B4HRL2   A0A1B0GJA4   A0A182GXJ6   B0X6F6   W8CB08   A0A1I8Q181   A0A023ESK7   A0A1B0BSZ7   A0A1W4WPV2   A0A1A9ZYJ3   A0A1A9V9R0   A0A0K8UI97   B4MRE5   D6WAG4   A0A195B091   A0A1I8MP99   Q7K5K0   A0A151IJS3   A0A0T6B1E7   A0A034WVC6   A0A158NKJ4   A0A0P4YWU0   B3MGU3   B4P2P6   A0A336LL94   A0A1S4EVF5   Q17PP6   A0A1L8DSL6   A0A1A9W6X2   A0A0A1X3V6   A0A0P4YU91   A0A1A9XP45   E9G070   A0A0P5BFN3   A0A164U921   W8BWI1   A0A0P6IMU2   A0A1J1IZZ3   A0A0M8ZUF2   A0A1Y1KSB5   A0A182RJT8   A0A088A2H5   A0A151JB38   A0A0P5NVU3   A0A182YIU6   A0A182W3Y0   A0A182IEQ7   Q7QDY6   A0A1B0G4H4   A0A195FC58   A0A0M4EFD8   R4WDL9   A0A2A3E9Q7   A0A182J2G2   A0A084VUQ9   B4LL74   A0A1W4WBN0   B3N8T1   B4J5M1   A0A0N8C3A8   K7JL29   A0A182KZZ5   A0A2J7QNZ5   T1HCD1   A0A154NW71   A0A0P5IMA3   A0A210R3U4   A0A2T7NT70   B4KPH0   E9IFC8   A0A1B6FAW1  

Pubmed

19121390    26354079    22118469    22936249    17994087    26483478    + More
24495485    24945155    18362917    19820115    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    21347285    17550304    17510324    25830018    21292972    28004739    25244985    12364791    14747013    17210077    23691247    24438588    20075255    20966253    28812685    21282665   

EMBL

BABH01000868    BABH01000869    KQ460205    KPJ16926.1    KQ459299    KPJ01986.1    + More
NWSH01001121    PCG72501.1    PCG72502.1    ODYU01002593    SOQ40297.1    ODYU01000370    SOQ35040.1    RSAL01000144    RVE45989.1    AGBW02005699    OWR55265.1    GFDL01012880    JAV22165.1    CM002911    KMY92222.1    CH480816    EDW46894.1    AJWK01019999    JXUM01020581    KQ560576    KXJ81835.1    DS232412    EDS41439.1    GAMC01000874    JAC05682.1    GAPW01001333    JAC12265.1    JXJN01019947    GDHF01033303    GDHF01026058    JAI19011.1    JAI26256.1    CH963850    EDW74684.1    KQ971312    EEZ98003.2    KQ976692    KYM77876.1    AE013599    AY047578    AAF59118.2    AAK77310.1    KQ977294    KYN03899.1    LJIG01016338    KRT80901.1    GAKP01000792    JAC58160.1    ADTU01018869    GDIP01226024    JAI97377.1    CH902619    EDV37861.1    CM000157    EDW89307.1    UFQT01000039    SSX18475.1    CH477190    EAT48705.1    GFDF01004616    JAV09468.1    GBXI01008263    JAD06029.1    GDIP01223522    JAI99879.1    GL732528    EFX87449.1    GDIP01185392    JAJ38010.1    LRGB01001581    KZS11155.1    GAMC01000875    JAC05681.1    GDIQ01008616    JAN86121.1    CVRI01000065    CRL05835.1    KQ435881    KOX69823.1    GEZM01076998    JAV63478.1    KQ979182    KYN22326.1    GDIQ01137028    JAL14698.1    APCN01009333    AAAB01008849    EAA07102.4    CCAG010007755    KQ981693    KYN37787.1    CP012524    ALC40897.1    AK417808    BAN21023.1    KZ288311    PBC28458.1    ATLV01016988    KE525139    KFB41703.1    CH940648    EDW60811.1    CH954177    EDV59558.1    CH916367    EDW00784.1    GDIQ01118995    JAL32731.1    NEVH01012098    PNF30302.1    ACPB03002116    KQ434772    KZC03916.1    GDIQ01212015    JAK39710.1    NEDP02000506    OWF55730.1    PZQS01000009    PVD24361.1    CH933808    EDW10166.1    GL762838    EFZ20703.1    GECZ01022447    JAS47322.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000283053    UP000007151    + More
UP000001292    UP000092461    UP000069940    UP000249989    UP000002320    UP000095300    UP000092460    UP000192223    UP000092445    UP000078200    UP000007798    UP000007266    UP000078540    UP000095301    UP000000803    UP000078542    UP000005205    UP000007801    UP000002282    UP000008820    UP000091820    UP000092443    UP000000305    UP000076858    UP000183832    UP000053105    UP000075900    UP000005203    UP000078492    UP000076408    UP000075920    UP000075840    UP000007062    UP000092444    UP000078541    UP000092553    UP000242457    UP000075880    UP000030765    UP000008792    UP000192221    UP000008711    UP000001070    UP000002358    UP000075882    UP000235965    UP000015103    UP000076502    UP000242188    UP000245119    UP000009192   

PRIDE

H9IVC5    Q7K5K0   

Pfam

PF12796   Ank_2        + More
PF00536   SAM_1
PF07647   SAM_2
PF00023   Ank
PF13606   Ank_3
PF08676   MutL_C
PF01119   DNA_mis_repair

Interpro

IPR020683   Ankyrin_rpt-contain_dom        + More
IPR036770   Ankyrin_rpt-contain_sf       
IPR013761   SAM/pointed_sf       
IPR002110   Ankyrin_rpt       
IPR001660   SAM       
IPR002099   DNA_mismatch_repair_N       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       
IPR042121   MutL_C_regsub       
IPR014790   MutL_C       
IPR042120   MutL_C_dimsub       
IPR036890   HATPase_C_sf       
IPR003594   HATPase_C       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR014762   DNA_mismatch_repair_CS       
IPR038973   MutL/Mlh/Pms       
IPR013507   DNA_mismatch_S5_2-like       
IPR037198   MutL_C_sf       

SUPFAM

SSF48403   SSF48403        + More
SSF47769   SSF47769       
SSF55874   SSF55874       
SSF118116   SSF118116       
SSF54211   SSF54211       

Gene 3D

1.10.150.50     1.25.40.20     2.30.42.20     3.30.1370.100     3.30.230.10     3.30.565.10    

CDD

cd00204  ANK
cd00075  HATPase_c

ProteinModelPortal

H9IVC5   A0A194RLR6   A0A194QEU4   A0A2A4JKL9   A0A2A4JM82   A0A2H1VHK0   + More
A0A2H1V2H2   A0A3S2NAN9   A0A212FNF1   A0A1Q3F3M7   A0A0J9R7V9   B4HRL2   A0A1B0GJA4   A0A182GXJ6   B0X6F6   W8CB08   A0A1I8Q181   A0A023ESK7   A0A1B0BSZ7   A0A1W4WPV2   A0A1A9ZYJ3   A0A1A9V9R0   A0A0K8UI97   B4MRE5   D6WAG4   A0A195B091   A0A1I8MP99   Q7K5K0   A0A151IJS3   A0A0T6B1E7   A0A034WVC6   A0A158NKJ4   A0A0P4YWU0   B3MGU3   B4P2P6   A0A336LL94   A0A1S4EVF5   Q17PP6   A0A1L8DSL6   A0A1A9W6X2   A0A0A1X3V6   A0A0P4YU91   A0A1A9XP45   E9G070   A0A0P5BFN3   A0A164U921   W8BWI1   A0A0P6IMU2   A0A1J1IZZ3   A0A0M8ZUF2   A0A1Y1KSB5   A0A182RJT8   A0A088A2H5   A0A151JB38   A0A0P5NVU3   A0A182YIU6   A0A182W3Y0   A0A182IEQ7   Q7QDY6   A0A1B0G4H4   A0A195FC58   A0A0M4EFD8   R4WDL9   A0A2A3E9Q7   A0A182J2G2   A0A084VUQ9   B4LL74   A0A1W4WBN0   B3N8T1   B4J5M1   A0A0N8C3A8   K7JL29   A0A182KZZ5   A0A2J7QNZ5   T1HCD1   A0A154NW71   A0A0P5IMA3   A0A210R3U4   A0A2T7NT70   B4KPH0   E9IFC8   A0A1B6FAW1  

PDB

6NE2     E-value=1.47586e-14,     Score=194

KEGG

101741162    K18410 ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 | (RefSeq) ankyrin r

GO

GO:0016021   GO:0000502   GO:0034587   GO:0005739   GO:0071546   GO:0005524   GO:0032300   GO:0006298   GO:0030983   GO:0016887   GO:0005515   GO:0016192   GO:0051082   GO:0005506   GO:0030145   GO:0050906   GO:0016818   GO:0003707   GO:0051537  

PANTHER

PTHR10073  

Length:

480

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.8466

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00262

outside

1  -  480

 

 

Pi

290.404132

Theta

217.893058

Tajima's D

1.437794

CLR

0.293601

CSRT

0.774561271936403

Interpretation

Uncertain