Gene

KWMTBOMO07853  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000940

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_[Amyelois_transitella]

Location

Bomo_Chr13(+):8311093-8314382      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.461

CDS

ATGACAATCGAAGCGATCTCAGTTCAATATGAATATAAGAAACATGTGAATATAAGACAAGAAATGGTCGAGAATTTACGTGAATGGATTCGGAAGCAGCCGCATCTTCCAGCTGAGTTTATAACTGATCTTGATATAATACTCGCATTTCACTGCTGCGAATATGACACTGAGCGAACAAAGCACTTGATTGACCTCAATTTTACAGTCAGAACATTGTTCTCGTTTTATCAAAACAGAGAAGTAAACGAATGTATTGAAAAAGCCTTGGACACTTGGTTAGTGACACCACTAAGCACCCCGACTAAGAAAGGATATCGACCGATATACTGCCAGATCTTGGATTCGGACCCTAATAAATTTGTCTATCAGGATGCGGTTAGAGCTTTCACAATGATAGTGGACTTATGGCAGTACGAAGAGGGAACTGTACCCGGAATAGTGATTATATTGAACATGAAAGACGTATCACTTGGACACATTTCTCAAATAGATTTGATTGTTGCTCAACAATTCTTTTATTATCTGCAGGAAAGTATGATAGTGAAACTAAAAGAGTTTCATTTCATTAATGCACCGAGTCATATGGATAAATTAATGATGATGATAAGACCGCTTATGAAGGATACGTTTTTAAATGTTATTAAAGTACACGAAGCGGGTTCTAAGACAATTGAAGAATACTTTTCGATTGACGCACTGCCAGAAGAAAGTACTGGGATCATATTGAAAGAAAATATATTGAAAAAATTAAAAGCTAACAGACAGTTTTTTGAAGATGAATCCAAGAAAAGAGTCAACGAAGCGAAACGTCCTGGAGGACCAAAAACAATTGCCTCGTTTTTCTCTAATGTAGAAACATCTTTCAAGAAACTTGAAATAGATTAA

Protein

MTIEAISVQYEYKKHVNIRQEMVENLREWIRKQPHLPAEFITDLDIILAFHCCEYDTERTKHLIDLNFTVRTLFSFYQNREVNECIEKALDTWLVTPLSTPTKKGYRPIYCQILDSDPNKFVYQDAVRAFTMIVDLWQYEEGTVPGIVIILNMKDVSLGHISQIDLIVAQQFFYYLQESMIVKLKEFHFINAPSHMDKLMMMIRPLMKDTFLNVIKVHEAGSKTIEEYFSIDALPEESTGIILKENILKKLKANRQFFEDESKKRVNEAKRPGGPKTIASFFSNVETSFKKLEID

Uniprot

H9IUL0   A0A2A4J9W6   A0A2H1V703   A0A0S2Z3V6   A0A0S2Z3U0   A0A2H1VNR9   + More
A0A2H1VNP8   A0A2A4JBJ3   A0A3S2L272   A0A2H4RMR3   A0A212F255   A0A194PT99   A0A212F242   A0A212F272   A0A2H4RMT6   I4DLH3   A0A2H4RMW0   A0A0L7LI44   A0A2A4JLN7   A0A2H4RMR0   A0A0S2Z313   H9JUQ5   A0A2A4IZQ3   A0A2H4RMP1   H9JUQ9   A0A194PRP9   A0A2A4ISL2   H9JUE6   H9JUR0   A0A212F251   A0A0N0PCB2   A0A026VZY9   A0A151WMV5   A0A195CB81   A0A151JTT8   A0A151HZ83   A0A0L7R9P5   A0A195ECX6   A0A158NIC6   F4WLR1   E2BL70   A0A151HZE1   A0A158NIC7   F4WEQ5   E2A8Q9   E9IA70   A0A310SB26   A0A151IIH9   F4X1H6   A0A151WMV2   A0A195ECZ2   A0A0J7NH54   A0A1W4X5F9   A0A151JTJ8   A0A1Y1JXE4   A0A151X7H5   V9IMD6   A0A195BKL4   K7ITY6   A0A195DLY0   K7J0H8   A0A158NA70   A0A1Q3FQZ8   A0A195FRC0   B4JH73   A0A2A3EJJ4   K7ITY7   A0A151WMU4   E2BL75   A0A139WDA0   B4N8S4   E2A8R1   A0A154PLR6   A0A151JTJ2   B3MSY3   A0A1B0FV49   K7J0H5   A0A232F895   A0A158NIC8   B4KCH5   Q297R5   A0A232EEM7   E2A8R3   A0A1Y1MV86   B4G2X4   A0A195FR81   A0A026W2F4   A0A151IIJ3   B4M0Y7   A0A3B0JFB2   A0A0L0CK65   A0A0C9RRA5   A0A1B0D1Y1   E9IA74   Q4V5F0   B4QT82   A0A195FQW3   Q9V9V4   A0A195ED97  

Pubmed

19121390    25684408    29136137    22118469    26354079    22651552    + More
26227816    24508170    21347285    21719571    20798317    21282665    28004739    20075255    17994087    18362917    19820115    28648823    15632085    30249741    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867   

EMBL

BABH01000888    NWSH01002262    PCG68761.1    ODYU01000988    SOQ36579.1    KT943566    + More
ALQ33324.1    KT943550    ALQ33308.1    ODYU01003540    SOQ42448.1    ODYU01003541    SOQ42450.1    NWSH01002010    PCG69445.1    RSAL01000223    RVE44001.1    MG434617    ATY51923.1    AGBW02010783    OWR47825.1    KQ459595    KPI95989.1    OWR47818.1    OWR47826.1    MG434644    ATY51950.1    AK402141    BAM18763.1    KPI95986.1    MG434659    ATY51965.1    JTDY01001042    KOB75034.1    NWSH01001157    PCG72320.1    MG434609    ATY51915.1    KT943538    ALQ33296.1    BABH01022824    NWSH01004847    PCG64660.1    MG434601    ATY51907.1    BABH01022835    BABH01022836    KPI95987.1    NWSH01007421    PCG62977.1    BABH01022838    BABH01022842    BABH01022843    BABH01022844    OWR47817.1    KQ460643    KPJ13319.1    KK107536    EZA49210.1    KQ982934    KYQ49137.1    KQ978009    KYM98124.1    KQ981875    KYN34011.1    KQ976695    KYM77582.1    KQ414624    KOC67554.1    KQ979074    KYN23070.1    ADTU01016468    GL888213    EGI64859.1    GL448949    EFN83556.1    KYM77581.1    ADTU01016476    ADTU01016477    GL888105    EGI67317.1    GL437663    EFN70138.1    GL761987    EFZ22528.1    KQ774368    OAD52321.1    KQ977477    KYN02476.1    GL888529    EGI59704.1    KYQ49138.1    KYN23073.1    LBMM01005052    KMQ91855.1    KYN34015.1    GEZM01098136    JAV53982.1    KQ982446    KYQ56322.1    JR052704    AEY61761.1    KQ976455    KYM85150.1    KQ980734    KYN13837.1    ADTU01010052    GFDL01005015    JAV30030.1    KQ981305    KYN42976.1    CH916369    EDV92764.1    KZ288238    PBC31369.1    KYQ49140.1    EFN83561.1    KQ971361    KYB25884.1    CH964232    EDW81525.1    EFN70140.1    KQ434973    KZC12773.1    KYN34006.1    CH902623    EDV30373.1    AJWK01010375    NNAY01000747    OXU26710.1    ADTU01016481    ADTU01016482    ADTU01016483    ADTU01016484    CH933806    EDW14794.1    CM000070    EAL28140.1    NNAY01005263    OXU16810.1    EFN70142.1    GEZM01023511    JAV88355.1    CH479179    EDW24169.1    KYN42973.1    QOIP01000008    EZA49214.1    RLU19830.1    KYN02478.1    CH940650    EDW67398.1    OUUW01000005    SPP81017.1    JRES01000266    KNC32793.1    GBYB01009841    JAG79608.1    AJVK01022454    AJVK01022455    AJVK01022456    EFZ22533.1    BT022706    AAY55122.1    CM000364    EDX15144.1    KYN42975.1    AE014297    AAF57178.1    KYN23071.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000037510    + More
UP000053240    UP000053097    UP000075809    UP000078542    UP000078541    UP000078540    UP000053825    UP000078492    UP000005205    UP000007755    UP000008237    UP000000311    UP000036403    UP000192223    UP000002358    UP000001070    UP000242457    UP000007266    UP000007798    UP000076502    UP000007801    UP000092461    UP000215335    UP000009192    UP000001819    UP000008744    UP000279307    UP000008792    UP000268350    UP000037069    UP000092462    UP000000304    UP000000803   

PRIDE

H9IUL0    H9JUQ5    H9JUQ9    H9JUE6    H9JUR0    Q4V5F0    + More
Q9V9V4   

Pfam

PF00650   CRAL_TRIO        + More
PF00046   Homeodomain
PF00412   LIM

Interpro

IPR001251   CRAL-TRIO_dom        + More
IPR036273   CRAL/TRIO_N_dom_sf       
IPR036865   CRAL-TRIO_dom_sf       
IPR036291   NAD(P)-bd_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       
IPR001356   Homeobox_dom       
IPR001781   Znf_LIM       
IPR009057   Homeobox-like_sf       

SUPFAM

SSF52087   SSF52087        + More
SSF46938   SSF46938       
SSF51735   SSF51735       
SSF46689   SSF46689       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14
cd00086  homeodomain

ProteinModelPortal

H9IUL0   A0A2A4J9W6   A0A2H1V703   A0A0S2Z3V6   A0A0S2Z3U0   A0A2H1VNR9   + More
A0A2H1VNP8   A0A2A4JBJ3   A0A3S2L272   A0A2H4RMR3   A0A212F255   A0A194PT99   A0A212F242   A0A212F272   A0A2H4RMT6   I4DLH3   A0A2H4RMW0   A0A0L7LI44   A0A2A4JLN7   A0A2H4RMR0   A0A0S2Z313   H9JUQ5   A0A2A4IZQ3   A0A2H4RMP1   H9JUQ9   A0A194PRP9   A0A2A4ISL2   H9JUE6   H9JUR0   A0A212F251   A0A0N0PCB2   A0A026VZY9   A0A151WMV5   A0A195CB81   A0A151JTT8   A0A151HZ83   A0A0L7R9P5   A0A195ECX6   A0A158NIC6   F4WLR1   E2BL70   A0A151HZE1   A0A158NIC7   F4WEQ5   E2A8Q9   E9IA70   A0A310SB26   A0A151IIH9   F4X1H6   A0A151WMV2   A0A195ECZ2   A0A0J7NH54   A0A1W4X5F9   A0A151JTJ8   A0A1Y1JXE4   A0A151X7H5   V9IMD6   A0A195BKL4   K7ITY6   A0A195DLY0   K7J0H8   A0A158NA70   A0A1Q3FQZ8   A0A195FRC0   B4JH73   A0A2A3EJJ4   K7ITY7   A0A151WMU4   E2BL75   A0A139WDA0   B4N8S4   E2A8R1   A0A154PLR6   A0A151JTJ2   B3MSY3   A0A1B0FV49   K7J0H5   A0A232F895   A0A158NIC8   B4KCH5   Q297R5   A0A232EEM7   E2A8R3   A0A1Y1MV86   B4G2X4   A0A195FR81   A0A026W2F4   A0A151IIJ3   B4M0Y7   A0A3B0JFB2   A0A0L0CK65   A0A0C9RRA5   A0A1B0D1Y1   E9IA74   Q4V5F0   B4QT82   A0A195FQW3   Q9V9V4   A0A195ED97  

PDB

3W68     E-value=0.000184272,     Score=105

KEGG

101741724    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0016491   GO:0003677   GO:0005634   GO:0046872  

Subcellular location

Nucleus  

Length:

295

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02317

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.04344

outside

1  -  295

 

 

Pi

279.038556

Theta

204.953299

Tajima's D

1.134547

CLR

0

CSRT

0.699665016749163

Interpretation

Uncertain