Gene

KWMTBOMO07850

Pre Gene Modal

BGIBMGA000938

Annotation

RWD_domain-containing_protein_2A_[Operophtera_brumata]

Location

Bomo_Chr13(+):8274383-8275360      View in EpiBrowser

Full name

RWD domain-containing protein      

Location in the cell

Nuclear   Reliability : 3.831

CDS

ATGGATATTGAAGGAACAAATAATTCAAGTAAAGAACGATTTGTTGAGTGCTTAACGCAGCAATTGAGTGAATTAGAATTATTAGAATCAATGTATCCCAATAAAGGGGATTTACTTTTATGTAATAAAAACATAAAAGACATTAAGTCTTTTATTGAGAATAATTCTGAATATGTTCCTGATAATTTAGATTTTACGTTAAATCTTTTTAACAATCAATTTAAAATTGAAATTTCAATCAATCTTCCAAGTTTTTACCCAGAAGAAGAACCAGATGTATACATTAGATGTAATCAACTAAATCGAATGCAAGAAACTCTAATCAATAGTCAACTGCAAGAATTTATGAAAACTATTAACAGAGGCGAGTTGTGTTTATACACAATCATAACATGGATACAAGAACATATTGAGGATATAAAACTATCAGAAGTACTTCCTGCAGAAGAAACTAATACTTCAAAATTATTTGATGAAAAGTTTTCAAGACTTTGGGTGTATTCTCATCATATATATAACAAGAAAAAGAGAGAAAAGATTGTGAAGAAAGCAAAAGAGTTAAATTTGACTGGCTTCTGTTTGCCCGGTAAACCTGGAATAGTCTGCATTGAAGGTGAAACAAAAGACTGTGAAGATTGGTGGAGGGAGATCAAATGTTTAAATTGGCAGAAATTAGTTATTCAGAAATCAGAGGTTTTAGAATGTTTAGAAAATGATAGAAAGTTTACTAATTTTGAGGAATTACAATTTCAATCTAACAATAACACAAAATTTTCTAACATGAGTGAGTTTTCCAAATTCATGAACTTGAATGGTTTTCAGTCAATATTTAATGAATTATTTGGATTATGA

Protein

MDIEGTNNSSKERFVECLTQQLSELELLESMYPNKGDLLLCNKNIKDIKSFIENNSEYVPDNLDFTLNLFNNQFKIEISINLPSFYPEEEPDVYIRCNQLNRMQETLINSQLQEFMKTINRGELCLYTIITWIQEHIEDIKLSEVLPAEETNTSKLFDEKFSRLWVYSHHIYNKKKREKIVKKAKELNLTGFCLPGKPGIVCIEGETKDCEDWWREIKCLNWQKLVIQKSEVLECLENDRKFTNFEELQFQSNNNTKFSNMSEFSKFMNLNGFQSIFNELFGL

Uniprot

A0A0L7KTE1   A0A1E1WC98   A0A2A4JTD0   A0A194RHW1   A0A194QAH3   A0A1B6EHS2   + More
A0A1B6MR14   A0A1B6JGW3   A0A067R8H9   A0A2J7PSF3   A0A1Y1KAM9   A0A151IMC8   A0A195FEA2   A0A158NXE2   F4X874   E2C400   A0A151X9D0   A0A195BGB6   A0A3Q0IQ32   A0A1W4X1A2   A0A0P4WMJ9   A0A091W2S5   A0A195DQU0   A0A091KH84   A0A026W6H3   J3JYP6   E9IFJ7   A0A1B0GK23   A0A091G9J1   A0A093JAY6   A0A0A0AP36   A0A093CGZ8   A0A093HEV1   A0A091SF32   E1ZVD1   A0A087R8M1   E1BQU7   A0A091W7B0   A0A091MYE3   A0A1U8DFW1   A0A094NAY2   H2ZWD4   A0A093P9E4   A0A2I0T709   V8PBX4   G1KTP8   A0A099ZEQ7   A0A091HJJ8   D2A186   A0A091TGB5   A0A2D4F5T7   J3S9H5   A0A3L8T061   A0A091LU08   A0A091K092   A0A3Q1JNU4   A0A093JCZ5   A0A091F6E5   A0A1V4JMC4   A0A091IQX4   Q640E2   A0A1L8G9I7   A0A1W7RDP0   A0A091NLW8   C3ZFN2   A0A0C9S067   F7E0K4   A0A3Q7TPH3   F6WQ00   A8E5W4   A0A3Q7NGS2   A0A3Q7NGR1   W5NKF0   A0A091NHE7   A0A2P4SLI8   A0A2I0MV81   D2HRT8   A0A3B4D7M1   A0A0B8RTS3   L7M7Y6   A0A154PAK1   U3JJ63   A0A2H6NFU5   J9NWU2   A0A2Y9HIH5   A0A2U3XQY5   A0A2U3WH24   A0A3Q2P273   A0A3P4MUW4   G3TET3   F6YAC7   A0A383YQS1   A0A2U3WH16   A0A340WBP9   A0A146NLB8   G1NLV1   A0A341CH12   C3ZQA7   A0A3Q7WMK6  

Pubmed

26227816    26354079    24845553    28004739    21347285    21719571    + More
20798317    24508170    30249741    22516182    23537049    21282665    15592404    9215903    24297900    18362917    19820115    23025625    30282656    27762356    26358130    18563158    20431018    23371554    20010809    25476704    25576852    16341006    19892987    20838655   

EMBL

JTDY01006094    KOB66294.1    GDQN01006573    GDQN01004858    JAT84481.1    JAT86196.1    + More
NWSH01000642    PCG75079.1    KQ460205    KPJ16915.1    KQ459299    KPJ01995.1    GECZ01032292    JAS37477.1    GEBQ01001613    JAT38364.1    GECU01009298    JAS98408.1    KK852866    KDR14738.1    NEVH01021931    PNF19265.1    GEZM01089375    JAV57518.1    KQ977059    KYN06037.1    KQ981673    KYN38349.1    ADTU01029864    GL888932    EGI57205.1    GL452364    EFN77386.1    KQ982373    KYQ56995.1    KQ976500    KYM83200.1    GDRN01061018    JAI65258.1    KL411541    KFR09355.1    KQ980581    KYN15280.1    KK743453    KFP39457.1    KK107372    QOIP01000004    EZA51707.1    RLU23455.1    APGK01057295    BT128376    KB741279    KB632354    AEE63334.1    ENN71057.1    ERL93363.1    GL762841    EFZ20653.1    AJWK01022514    KL447974    KFO79045.1    KK611057    KFW12200.1    KL872360    KGL95313.1    KL459315    KFV11587.1    KL206020    KFV77950.1    KK817543    KFQ38830.1    GL434492    EFN74841.1    KL226213    KFM09825.1    AADN05000003    KK734920    KFR11512.1    KK521427    KFP66540.1    KL269819    KFZ63676.1    AFYH01208009    KL225531    KFW73543.1    KZ516688    PKU29585.1    AZIM01000354    ETE71488.1    KL892027    KGL79330.1    KL514274    KFO87493.1    KQ971338    EFA02629.1    KK472079    KFQ57846.1    IACJ01058604    LAA42822.1    JU175799    GBEX01003010    AFJ51323.1    JAI11550.1    QUSF01000002    RLW12223.1    KL292289    KFP49816.1    KK536524    KFP29568.1    KL217374    KFV76749.1    KK719548    KFO64089.1    LSYS01006902    OPJ73343.1    KL218085    KFP02056.1    BC082686    AAH82686.1    CM004474    OCT80510.1    GDAY02002174    JAV49258.1    KL387393    KFP90386.1    GG666614    EEN48640.1    GBYB01015190    JAG84957.1    AAMC01081434    BC153741    AAI53742.1    AHAT01026700    KK833360    KFP78205.1    PPHD01037293    POI24963.1    AKCR02000002    PKK33584.1    ACTA01177676    GL193244    EFB27344.1    GBSH01002405    JAG66621.1    GACK01005815    JAA59219.1    KQ434857    KZC08873.1    AGTO01020904    IACI01086837    LAA29645.1    AAEX03008492    CYRY02013018    VCW83866.1    GCES01154090    JAQ32232.1    GG666661    EEN45163.1   

Proteomes

UP000037510    UP000218220    UP000053240    UP000053268    UP000027135    UP000235965    + More
UP000078542    UP000078541    UP000005205    UP000007755    UP000008237    UP000075809    UP000078540    UP000079169    UP000192223    UP000053283    UP000078492    UP000053097    UP000279307    UP000019118    UP000030742    UP000092461    UP000053760    UP000053858    UP000053584    UP000000311    UP000053286    UP000000539    UP000053605    UP000189705    UP000008672    UP000054081    UP000001646    UP000053641    UP000007266    UP000276834    UP000265040    UP000053875    UP000052976    UP000190648    UP000054308    UP000186698    UP000001554    UP000008143    UP000286640    UP000286641    UP000018468    UP000053872    UP000008912    UP000261440    UP000076502    UP000016665    UP000002254    UP000248481    UP000245341    UP000245340    UP000265000    UP000007646    UP000002281    UP000265300    UP000001645    UP000252040    UP000286642   

Pfam

PF05773   RWD        + More
PF06544   DUF1115
PF12896   ANAPC4
PF12894   ANAPC4_WD40

Interpro

IPR017359   UCP038021_RWD        + More
IPR006575   RWD-domain       
IPR010541   DUF1115       
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR024977   Apc4_WD40_dom       
IPR024789   APC4       
IPR024790   APC4_long_dom       
IPR036322   WD40_repeat_dom_sf       

SUPFAM

SSF54495   SSF54495        + More
SSF50978   SSF50978       

Gene 3D

3.10.110.10    

ProteinModelPortal

A0A0L7KTE1   A0A1E1WC98   A0A2A4JTD0   A0A194RHW1   A0A194QAH3   A0A1B6EHS2   + More
A0A1B6MR14   A0A1B6JGW3   A0A067R8H9   A0A2J7PSF3   A0A1Y1KAM9   A0A151IMC8   A0A195FEA2   A0A158NXE2   F4X874   E2C400   A0A151X9D0   A0A195BGB6   A0A3Q0IQ32   A0A1W4X1A2   A0A0P4WMJ9   A0A091W2S5   A0A195DQU0   A0A091KH84   A0A026W6H3   J3JYP6   E9IFJ7   A0A1B0GK23   A0A091G9J1   A0A093JAY6   A0A0A0AP36   A0A093CGZ8   A0A093HEV1   A0A091SF32   E1ZVD1   A0A087R8M1   E1BQU7   A0A091W7B0   A0A091MYE3   A0A1U8DFW1   A0A094NAY2   H2ZWD4   A0A093P9E4   A0A2I0T709   V8PBX4   G1KTP8   A0A099ZEQ7   A0A091HJJ8   D2A186   A0A091TGB5   A0A2D4F5T7   J3S9H5   A0A3L8T061   A0A091LU08   A0A091K092   A0A3Q1JNU4   A0A093JCZ5   A0A091F6E5   A0A1V4JMC4   A0A091IQX4   Q640E2   A0A1L8G9I7   A0A1W7RDP0   A0A091NLW8   C3ZFN2   A0A0C9S067   F7E0K4   A0A3Q7TPH3   F6WQ00   A8E5W4   A0A3Q7NGS2   A0A3Q7NGR1   W5NKF0   A0A091NHE7   A0A2P4SLI8   A0A2I0MV81   D2HRT8   A0A3B4D7M1   A0A0B8RTS3   L7M7Y6   A0A154PAK1   U3JJ63   A0A2H6NFU5   J9NWU2   A0A2Y9HIH5   A0A2U3XQY5   A0A2U3WH24   A0A3Q2P273   A0A3P4MUW4   G3TET3   F6YAC7   A0A383YQS1   A0A2U3WH16   A0A340WBP9   A0A146NLB8   G1NLV1   A0A341CH12   C3ZQA7   A0A3Q7WMK6  

PDB

2DAW     E-value=8.51169e-09,     Score=142

KEGG

101742597    no KO assigned | (RefSeq) RWD domain-containing protein 2A

GO

GO:0005680   GO:0030071   GO:0031145   GO:0005515   GO:0003676   GO:0008270   GO:0005506   GO:0030145   GO:0050906   GO:0016818   GO:0003707   GO:0051537  

PANTHER

PTHR15955   PTHR13260  

Length:

283

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00122

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04098

outside

1  -  283

 

 

Pi

84.677919

Theta

71.460047

Tajima's D

0.753368

CLR

0.763502

CSRT

0.593270336483176

Interpretation

Uncertain