Silkworm Genome Informatics Database

Gene

KWMTBOMO07847

Annotation

Matrix-remodeling-associated_protein_5_[Operophtera_brumata]

Location

Bomo_Chr13(+):8252763-8257968 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.097

CDS

ATGTGCATATCAAAGAGTCTTGATGGTTTACAATATGCAGTCAGTGAAGTGGAAATACTAGTCTCTAGTGCATTTACCCCTATTGATGCTGTAAAACTAGCAGCTATTATAATTTCAATAGTAGTTATTATGGGATCTGCCATACTTTACTATCAACTGAAGAAAGATTGGAAGAAATATGAGGGTAGAGCAGTAGTTGCAGTTGATGAACCAGATGAGGAAATAGATGGTGATGAAATATATAATCAAACTACCACTAGCATCCATGAACCTGTTGCGGGACCAAGCAGAAATCAATCATCTGAACTTCTCTATGGAATAGATAACCAAGGATTAGATACAGATTTCAATTCAGTATTTGAAAATATTCAAATTAAATCACCACATCGTAGTTTGATTTAG

Protein

MCISKSLDGLQYAVSEVEILVSSAFTPIDAVKLAAIIISIVVIMGSAILYYQLKKDWKKYEGRAVVAVDEPDEEIDGDEIYNQTTTSIHEPVAGPSRNQSSELLYGIDNQGLDTDFNSVFENIQIKSPHRSLI

Uniprot

A0A2A4JSU0 A0A0L7KTB6 A0A212ELY9 A0A194Q996 A0A2H1VGS6 A0A194RH61 + More

Pubmed

26227816 22118469 26354079

EMBL

NWSH01000642 PCG75081.1 JTDY01006094 KOB66296.1 AGBW02013971 OWR42489.1 + More
KQ459299 KPJ01994.1 ODYU01002495 SOQ40045.1 KQ460205 KPJ16917.1

Proteomes

UP000218220 UP000037510 UP000007151 UP000053268 UP000053240

Pfam

PF00047 ig

Interpro

IPR036179   Ig-like_dom_sf        + More
IPR013783   Ig-like_fold
IPR013151   Immunoglobulin
IPR003599   Ig_sub
IPR007110   Ig-like_dom

SUPFAM

SSF48726 SSF48726

Gene 3D

2.60.40.10

ProteinModelPortal

A0A2A4JSU0 A0A0L7KTB6 A0A212ELY9 A0A194Q996 A0A2H1VGS6 A0A194RH61 + More

KEGG

101742302 no KO assigned | (RefSeq) uncharacterized LOC101742302

GO

GO:0016021

Length:

133

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.80547

Exp number, first 60 AAs:

20.80547

Total prob of N-in:

0.02580

POSSIBLE N-term signal

sequence

outside

1 - 30

TMhelix

31 - 53

inside

54 - 133

Pi

251.27559

Theta

225.728769

Tajima's D

0.507469

CLR

16.028317

CSRT

0.515874206289685

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics