Gene
KWMTBOMO07844
Pre Gene Modal
BGIBMGA001210
Annotation
PREDICTED:_COPII_coat_assembly_protein_SEC16_isoform_X1_[Bombyx_mori]
Transcription factor
Location in the cell
Nuclear Reliability : 4.075
Sequence
CDS
ATGTATCCCGCCCCTATATACAACGACATACCTCAAGAAGCGCAATTGAGAAAAATGGAGAGTAACGAAGGTCAACAAACTTTCTGTTTAAAATGGAATCATCACAAGACGAACTTAGTAGAAATCCTAGAGGCTCTGATAAAAGGGGAAACATATGTGGACTGTACGCTTGTGGTCGATGACCAAGTAACATTTAAAGCGCATCGAGTTGTCCTCGCCGCTAACTCCCCGTATTTCCAATCCATATTAGCCGATGTGCCCATGGATCATTGCAGTATTCTGTTTCCGGGGGTTAAGGATTTCGAAATGAGAGCGCTCCTTGAATATATGTACACGGGTGAAGTTAATGTTACACAAGCCCATATCCCTCGAATAATGAAAGTCGCTGAACAACTTGAAGTCAAGGGTCTTTTCGACATGACGGAATTGCGTAGGCAGCCCGGCAACACAGAACGGACTCCTGGCGCTTCGCCGCCTCGAGTTGTACCCGCTGCTCCTTCCAGCTTATCACCACCGGCACCTGCACCACCCTCGAGATGGCCGCCGCCACCTACTGCCCCCGTGCTTTCTGCTGCGTACGACTCGGTTGATATGAACCCGCTCAAACGGAAGAAACTATCGAGTATGTTAGCCACTCGGGACACCCCTATCTTAAGAAACGTGCTTGCTCAGAATTCCCCTGTAGATTCATCGCAGCCTATTTCATTAGTATGTCACCCTGTCAATCAGCAAAGTGTTCCGCCACGTTTGCACTCCAATGGGTCAGCACATGAAACTGACAGAGCTTCCAGTCCCCAAAGACCCTTCGATTACCGCCCACGTAGATTATCGTCTCGTGCTTCATCGCCTCATTTTCATCGATCAGATCGTTCTGAAGATGCACACTCTCCATATACTGAACGTTCATTTGAAGAGGAAACCCCACGAAATTTCCATCCGTCTCCACCACCGACCAATTTTCAACATGATGTCCGAGCTGGGCTAGCACCATATGTCCCGCCACAACAAAAACCCGAATGGAAAAGATACAAACAATATACAAGATCTGACATTTTGTCCGCCATAGAATGTGTGAGAAACGGTATGAGCGCTCTGCAAGCGTCGCGCAAATACGGCGTTCCTTCACGTACGTTGTATGATAAAGTGAAGAAACTTGGCATTACAACGAGTCGACCAATGAGTCGCGGGGTCAAGAGAGAACCCAATGGAGCTGCTTTTCCTTATGGACTAACTGGAGCTGGAGGGAATGATGAAGGCAATCCTACCACACCATTGATAGACCCATCGTTTCTGCAACAAGCTTTGGAAGGAGCTACAAGAGACGGGGGTCGAGAAGCATTACATGCCATGGCTTTGGCTGCTGCGGCACATGCAGCTTTAGCTCCTCGTACGCCACCACGGTCTCCACCACAGTCGCCCCGTACACCTCCGCCTGATGATGATCATGTAGAAGACCTATCAGTCTCTCGTCGCCGCGATCTAGACCCACCTACAGGTGTAATCGTGCCGCCACGGAACTTTGCTTTAGATTGTAGTAGTGAAAGAGATTGA
Protein
MYPAPIYNDIPQEAQLRKMESNEGQQTFCLKWNHHKTNLVEILEALIKGETYVDCTLVVDDQVTFKAHRVVLAANSPYFQSILADVPMDHCSILFPGVKDFEMRALLEYMYTGEVNVTQAHIPRIMKVAEQLEVKGLFDMTELRRQPGNTERTPGASPPRVVPAAPSSLSPPAPAPPSRWPPPPTAPVLSAAYDSVDMNPLKRKKLSSMLATRDTPILRNVLAQNSPVDSSQPISLVCHPVNQQSVPPRLHSNGSAHETDRASSPQRPFDYRPRRLSSRASSPHFHRSDRSEDAHSPYTERSFEEETPRNFHPSPPPTNFQHDVRAGLAPYVPPQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKYGVPSRTLYDKVKKLGITTSRPMSRGVKREPNGAAFPYGLTGAGGNDEGNPTTPLIDPSFLQQALEGATRDGGREALHAMALAAAAHAALAPRTPPRSPPQSPRTPPPDDDHVEDLSVSRRRDLDPPTGVIVPPRNFALDCSSERD
Summary
Uniprot
EMBL
Proteomes
PRIDE
Interpro
ProteinModelPortal
PDB
2VPK
E-value=3.32284e-07,
Score=131
Ontologies
GO
Topology
Subcellular location
Nucleus
Length:
516
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00245
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00148
outside
1 - 516
Population Genetic Test Statistics
Pi
237.450242
Theta
195.306752
Tajima's D
0.579364
CLR
0.122211
CSRT
0.542372881355932
Interpretation
Uncertain
