Gene

KWMTBOMO07840  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000936

Annotation

PREDICTED:_ribose-5-phosphate_isomerase_[Plutella_xylostella]

Location

Bomo_Chr13(+):8116413-8117411      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.33

CDS

ATGTCTTTAGAACAAGCGAAGCAAGTCGCGGCGTATCAAGCTGTCGATCAATTTGTTACGAATAATTGCATTTTTGGTGTCGGTAGCGGATCCACTGTTGTTTATGCAGTACAAAGACTCGCTGAACGCGTTGAATCAGAAAAACTGAAAGTAACCTGCATACCAACCTCCTTTCAAGCAAAGCAGCTGATAATCAAACATGGACTCAACCTTGGAGAACTTGAAACAAATCCAAATATTGATGTCACAATAGACGGTGCTGATGAAGTCGATTCAAACATGACACTTATCAAAGGAGGGGGAGGGTGTCTGTTACAAGAAAAAATTATTGCATCTTGTTCAAAGAAGCTTATTGTTATTGCGGACTATACAAAAGATTCTGTAAAACTTGGGGATAGATATAAGAAAGGTGTCCCTATTGAAGTTATTCCTATGGCCTATGTTCCTATTAAAAACAAAATCATATCATTGTATGGAGGTGAAATCAAGCTAAGAAGTGCTGTTGCCAAAGCAGGGCCTGTGGTTACTGACAATGGAAACTTTATCTTAGACTGGATGTTTGCAAACCAAAACTTGGATTGGGAGAAAGTCAATAACACAATAAAATTAATCCCTGGAGTTGTTGAAACAGGTTTATTTGTGAACATGTGCTGTAAAGCATATTTTGGCCAACCAGAAGGCAATGTTGTTGAAAGATCTGTTATAGAAAAATGA

Protein

MSLEQAKQVAAYQAVDQFVTNNCIFGVGSGSTVVYAVQRLAERVESEKLKVTCIPTSFQAKQLIIKHGLNLGELETNPNIDVTIDGADEVDSNMTLIKGGGGCLLQEKIIASCSKKLIVIADYTKDSVKLGDRYKKGVPIEVIPMAYVPIKNKIISLYGGEIKLRSAVAKAGPVVTDNGNFILDWMFANQNLDWEKVNNTIKLIPGVVETGLFVNMCCKAYFGQPEGNVVERSVIEK

Uniprot

H9IUK6   A0A0L7KZG1   A0A2A4JSQ5   A0A2H1VIQ4   A0A194RHJ3   A0A194QEV8   + More
S4P904   A0A212ELZ6   A0A1Y9H231   A0A182Q157   A0A182U9R3   Q5TQ02   A0A1I8JUI3   A0A1L8E1K6   A0A182WF58   A0A182V4D8   A0A182XCA2   A0A182HNK3   A0A182MD99   A0A182YPF6   A0A182LPH6   A0A084WBE5   A0A182JWF2   A0A1L8E1V9   A0A182P9C7   B0WAV4   A0A182T608   A0A1Q3EWL9   A0A1B0DGZ6   A0A182G623   Q16PI0   A0A182IJB9   A0A336KQK4   W5JTH8   A0A182FTD8   A0A336LPZ0   A0A026WGX1   T1DFH7   A0A2M3ZKX6   A0A034WNM5   A0A2M4BWY9   A0A0K8WH23   A0A2M4BW56   A0A0L0BZM6   A0A2M4AUD1   A0A1A9WIG3   E2A059   A0A0A1WIC2   A0A1Y1LIQ7   D2A0V2   A0A1I8P2K2   A0A232F9F4   T1PAQ2   A0A1B6C7U5   A0A1A9V3B6   A0A0B4J2Q2   A0A1B0C5H0   A0A1I8MW23   W8BWM5   A0A0B4J2P0   A0A2A3EI63   A0A1A9YMR8   A0A1W4WJD4   N6UNA7   U4UUL0   A0A1S3DML5   A0A0L7QVI9   A0A3Q2G9Y1   A0A158ND20   A0A3Q1J5C2   A0A1A8B7J9   A0A310S4G4   A0A2U9CHP9   N6UN84   A0A1A8KS62   A0A1A8BIU4   A0A1A8G985   A0A1A7WV47   A0A2I4BXQ5   A0A0M9AC32   A0A3B4TBX4   I3K324   A0A1B6ELL0   A0A3B4XK59   A0A3Q3KS68   A0A1A8S504   A0A1A8L0V8   A0A3Q2T0N7   G3NKN2   E0VP73   W5UKL9   A0A3B3HEF7   A0A3P8PN69   A0A146W3X8   A0A3P8S5E2   A0A3P9KSV1   A0A1B6KU92   A0A3Q1CL46   A0A3B1J9N1   A0A3B4AEI7  

Pubmed

19121390    26227816    26354079    23622113    22118469    12364791    + More
25244985    20966253    24438588    26483478    17510324    20920257    23761445    24508170    30249741    25348373    26108605    20798317    25830018    28004739    18362917    19820115    28648823    20075255    25315136    24495485    23537049    21347285    25186727    20566863    23127152    17554307    25329095    25463417   

EMBL

BABH01000903    JTDY01004095    KOB68612.1    NWSH01000642    PCG75075.1    ODYU01002774    + More
SOQ40681.1    KQ460205    KPJ16909.1    KQ459299    KPJ02001.1    GAIX01003949    JAA88611.1    AGBW02013971    OWR42481.1    AXCN02002114    AAAB01008966    EAL39480.3    GFDF01001486    JAV12598.1    APCN01001939    AXCM01000254    ATLV01022347    KE525331    KFB47539.1    GFDF01001430    JAV12654.1    DS231875    EDS41820.1    GFDL01015351    JAV19694.1    AJVK01060584    JXUM01147162    KQ570310    KXJ68390.1    CH477781    EAT36268.1    UFQS01000715    UFQT01000715    SSX06358.1    SSX26712.1    ADMH02000540    ETN66049.1    UFQS01000099    UFQT01000099    SSW99515.1    SSX19895.1    KK107213    QOIP01000007    EZA55280.1    RLU20000.1    GAMD01003136    JAA98454.1    GGFM01008404    MBW29155.1    GAKP01003579    JAC55373.1    GGFJ01008097    MBW57238.1    GDHF01001927    JAI50387.1    GGFJ01008091    MBW57232.1    JRES01001190    KNC24689.1    GGFK01011070    MBW44391.1    GL435551    EFN73192.1    GBXI01015665    JAC98626.1    GEZM01054606    JAV73529.1    KQ971338    EFA01628.1    NNAY01000599    OXU27466.1    KA644993    AFP59622.1    GEDC01027725    JAS09573.1    JXJN01025984    JXJN01026690    GAMC01002923    GAMC01002922    JAC03633.1    KZ288235    PBC31410.1    APGK01015617    KB739627    ENN82191.1    KB632374    ERL93830.1    KQ414726    KOC62635.1    ADTU01012183    HADY01024398    HAEJ01011436    SBP62883.1    KQ777390    OAD52092.1    CP026259    AWP16017.1    APGK01005693    KB736386    ENN83210.1    HAED01000737    HAEE01015182    SBR35232.1    HADZ01003183    HAEA01016471    SBP67124.1    HAEB01020407    SBQ66934.1    HADW01008146    HADX01015986    SBP09546.1    KQ435706    KOX80223.1    AERX01018740    GECZ01030949    JAS38820.1    HAEH01021630    SBS12638.1    HAEF01000142    HAEG01010079    SBR37524.1    DS235357    EEB15179.1    JT417054    AHH42240.1    GCES01062691    JAR23632.1    GEBQ01024989    JAT14988.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000075884    UP000075886    UP000075902    UP000007062    UP000075900    UP000075920    UP000075903    UP000076407    UP000075840    UP000075883    UP000076408    UP000075882    UP000030765    UP000075881    UP000075885    UP000002320    UP000075901    UP000092462    UP000069940    UP000249989    UP000008820    UP000075880    UP000000673    UP000069272    UP000053097    UP000279307    UP000037069    UP000091820    UP000000311    UP000007266    UP000095300    UP000215335    UP000078200    UP000002358    UP000092460    UP000095301    UP000005203    UP000242457    UP000092443    UP000192223    UP000019118    UP000030742    UP000079169    UP000053825    UP000265020    UP000005205    UP000265040    UP000246464    UP000192220    UP000053105    UP000261420    UP000005207    UP000261360    UP000261640    UP000265000    UP000007635    UP000009046    UP000221080    UP000001038    UP000265100    UP000265080    UP000265180    UP000257160    UP000018467    UP000261520   

PRIDE

H9IUK6   

Pfam

PF06026   Rib_5-P_isom_A        + More
PF11105   CCAP

Interpro

IPR004788   Ribose5P_isomerase_typA        + More
IPR037171   NagB/RpiA_transferase-like       
IPR020672   Ribose5P_isomerase_typA_subgr       
IPR024276   CCAP       

SUPFAM

SSF100950   SSF100950       

CDD

cd01398  RPI_A

ProteinModelPortal

H9IUK6   A0A0L7KZG1   A0A2A4JSQ5   A0A2H1VIQ4   A0A194RHJ3   A0A194QEV8   + More
S4P904   A0A212ELZ6   A0A1Y9H231   A0A182Q157   A0A182U9R3   Q5TQ02   A0A1I8JUI3   A0A1L8E1K6   A0A182WF58   A0A182V4D8   A0A182XCA2   A0A182HNK3   A0A182MD99   A0A182YPF6   A0A182LPH6   A0A084WBE5   A0A182JWF2   A0A1L8E1V9   A0A182P9C7   B0WAV4   A0A182T608   A0A1Q3EWL9   A0A1B0DGZ6   A0A182G623   Q16PI0   A0A182IJB9   A0A336KQK4   W5JTH8   A0A182FTD8   A0A336LPZ0   A0A026WGX1   T1DFH7   A0A2M3ZKX6   A0A034WNM5   A0A2M4BWY9   A0A0K8WH23   A0A2M4BW56   A0A0L0BZM6   A0A2M4AUD1   A0A1A9WIG3   E2A059   A0A0A1WIC2   A0A1Y1LIQ7   D2A0V2   A0A1I8P2K2   A0A232F9F4   T1PAQ2   A0A1B6C7U5   A0A1A9V3B6   A0A0B4J2Q2   A0A1B0C5H0   A0A1I8MW23   W8BWM5   A0A0B4J2P0   A0A2A3EI63   A0A1A9YMR8   A0A1W4WJD4   N6UNA7   U4UUL0   A0A1S3DML5   A0A0L7QVI9   A0A3Q2G9Y1   A0A158ND20   A0A3Q1J5C2   A0A1A8B7J9   A0A310S4G4   A0A2U9CHP9   N6UN84   A0A1A8KS62   A0A1A8BIU4   A0A1A8G985   A0A1A7WV47   A0A2I4BXQ5   A0A0M9AC32   A0A3B4TBX4   I3K324   A0A1B6ELL0   A0A3B4XK59   A0A3Q3KS68   A0A1A8S504   A0A1A8L0V8   A0A3Q2T0N7   G3NKN2   E0VP73   W5UKL9   A0A3B3HEF7   A0A3P8PN69   A0A146W3X8   A0A3P8S5E2   A0A3P9KSV1   A0A1B6KU92   A0A3Q1CL46   A0A3B1J9N1   A0A3B4AEI7  

PDB

1XTZ     E-value=1.09851e-54,     Score=537

KEGG

101743403    K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] | (RefSeq) ribose-5-phosphate isomerase

PATHWAY

00030    Pentose phosphate pathway - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01200    Carbon metabolism - Bombyx mori (domestic silkworm)
01230    Biosynthesis of amino acids - Bombyx mori (domestic silkworm)

GO

GO:0004751   GO:0009052   GO:0043231   GO:0006014   GO:0016021   GO:0043565   GO:0005506   GO:0030145   GO:0050906   GO:0005515   GO:0016818   GO:0003707   GO:0051537  

PANTHER

PTHR11934  

Length:

237

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.934890000000001

Exp number, first 60 AAs:

0.91486

Total prob of N-in:

0.10590

outside

1  -  237

 

 

Pi

136.49506

Theta

182.386719

Tajima's D

-0.859429

CLR

0.547529

CSRT

0.16009199540023

Interpretation

Uncertain