SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07836
Pre Gene Modal
BGIBMGA000934
Annotation
PREDICTED:_carbonic_anhydrase-related_protein_10_[Plutella_xylostella]
Location in the cell
Mitochondrial   Reliability : 1.693 Nuclear   Reliability : 1.269
 

Sequence

CDS
ATGAAGCTAGGAGATTTATCAAATCCGGAACTAAGGGTGCTGACTGAAGAACTTGAGAACATAAAGTACGGGGGTGCTGAAATGCCGGTAAACAAACTATCCGTACGTGGTCTGCTTCCCGATACGGACTACTACATGACGTATGATGGTTCAACCACGGCGCCTGCGTGCTTTGAAACCGTCACCTGGATTATTGTCAACAAACCAATTTACATCACTAAACAACAGCTCCACGGGCTGCGGAGGTTGATGCAGGGCGACGCGAAGCACCCGAAGGCACCCCTCGGCAACAACTTCAGACCACCCCAGCCCCTGCACCACAGGGCTGTTCGAACTAACATTGACTTTGACTTAAACAAGTATCCTGGAAAAACTTGCCCCAGCATGCAAAGAAACATGCATTACAAAGCTAAAAGCTGGACCCAGTACTGA
Protein
MKLGDLSNPELRVLTEELENIKYGGAEMPVNKLSVRGLLPDTDYYMTYDGSTTAPACFETVTWIIVNKPIYITKQQLHGLRRLMQGDAKHPKAPLGNNFRPPQPLHHRAVRTNIDFDLNKYPGKTCPSMQRNMHYKAKSWTQY

Summary

Similarity
Belongs to the alpha-carbonic anhydrase family.
EMBL
JTDY01005692    KOB66743.1    NWSH01000817    PCG74067.1    ODYU01011976    SOQ58027.1    + More
KQ459299    KPJ02004.1    KQ460205    KPJ16906.1    AGBW02011532    OWR46506.1    BABH01000916    BABH01000917    GEZM01014016    JAV92220.1    GEBQ01030214    JAT09763.1    KQ971338    EFA01627.2    DS235842    EEB18246.1    GEDC01008055    JAS29243.1    CH479194    EDW27163.1    CH379065    EDY73168.1    OUUW01000003    SPP78011.1    GAMC01000420    JAC06136.1    GBHO01044370    JAF99233.1    CH964239    EDW82010.2    CVRI01000004    CRK87256.1    CH902635    EDV33756.2    CH916370    EDW00539.1    GGFL01000598    MBW64776.1    CM000366    EDX17534.1    CH940651    EDW65771.1    CM000162    EDX02876.1    AE014298    AY051620    AAF46521.2    AAK93044.1    AFH07307.1    AXCN02001338    AXCN02001339    CH954180    EDV46225.1    CH933810    EDW07862.1    KRF94246.1    KRF94247.1    KRF94248.1    CP012528    ALC48332.1    AXCM01015173    CCAG010009368    CCAG010009369    APCN01001053    CH477197    EAT48348.1    CH480830    EDW45652.1    AAAB01008847    EAA06857.3    UFQS01000677    UFQT01000677    SSX06104.1    SSX26460.1    ATLV01017171    ATLV01017172    ATLV01017173    KE525157    KFB41928.1    GGMR01016260    MBY28879.1    ADTU01005290    ADTU01005291    JRES01001070    KNC25794.1    KQ414663    KOC65310.1    GGMR01005372    MBY17991.1    KK107139    EZA57846.1    GFXV01005100    MBW16905.1    ABLF02029015    GL765434    EFZ16295.1    LNIX01000006    OXA52424.1    KQ434839    KZC08056.1    KQ977394    KYN03067.1    NNAY01004105    OXU18361.1    KQ981856    KYN34511.1    ADMH02001740    ETN61238.1    JH432139    KQ976490    KYM83345.1    NEVH01000002    PNF44141.1    GFTR01004875    JAW11551.1    QOIP01000003    RLU24779.1    KQ768090    OAD53215.1    GGFL01001524    MBW65702.1    GBRD01009473    JAG56351.1    KRF99656.1    ALC49720.1    AXCN02001216    SPP78339.1    CH379064    EDY73119.1    CH479193    EDW26804.1    EDX02345.2    CH480865    EDW53653.1    EDV47494.1    BT024405    AAF46274.4    ABC86467.1    AHN59457.1    DS234059    EDS32747.1    JRES01001480    KNC22587.1    GAMC01002279    JAC04277.1   
Pfam
PF00194   Carb_anhydrase        + More
PF00069   Pkinase
Interpro
IPR036398   CA_dom_sf        + More
IPR001148   CA_dom       
IPR023561   Carbonic_anhydrase_a-class       
IPR041878   alpha_CARP_X/XI       
IPR000719   Prot_kinase_dom       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR018347   CAH2       
SUPFAM
SSF51069   SSF51069        + More
SSF56112   SSF56112       
Gene 3D
PDB
1Z97     E-value=3.74259e-17,     Score=209

Ontologies

Topology

Length:
143
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.21091
Exp number, first 60 AAs:
0.7627
Total prob of N-in:
0.06168
outside
1  -  143
 
 

Population Genetic Test Statistics

Pi
168.147741
Theta
152.342994
Tajima's D
0.5915
CLR
0
CSRT
0.546122693865307
Interpretation
Possibly Positive selection
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