SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07833
Pre Gene Modal
BGIBMGA000934
Annotation
PREDICTED:_carbonic_anhydrase-related_protein_10_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 2.136 PlasmaMembrane   Reliability : 1.946
 

Sequence

CDS
ATGCACAGACTCGTGGGTACGGCTGCAGTGTCTGCCCTACTGCAAATACTTCTATATTTTGCAGCCGTGACTGGCGTCAGCTGGGAGGAATGGTGGACCTATGACGGTATTTCAGGTCCCGCTTTCTGGGGATTAATCAATCCAGAATGGTCACTGTGCAACAAAGGCCGGAGACAGTCTCCAGTCAACTTGGAGCCCGAAAAACTTCTCTTCGACCCCAATCTACGATTTTTACATATAGATAAACACAGGATAAACGGATTAATTAGCAACACAGGACACTCCGTGATCTTCACCGTCGAAAACGAGACCCGGCACCACATCAATATCACGGGAGGTCCGCTATCCTACAAGTATCAATTTCACGAGATCCACATACATTATGGATTGCACGATCAATTTGGTTCCGAACACGCTATCAACGGATACTCTTTCCCGGCAGAGATACAAATTTTCGGTTTTAATTCTCAACTTTATTCGAACTTTTCCGAAGCATTGCATAAAGCTCAAGGAATCGTTTCTATATCATTACTGCTCCAGGTATGTATGTGTACTTTGTTGTTTTGCCCCGCTTTTTAA
Protein
MHRLVGTAAVSALLQILLYFAAVTGVSWEEWWTYDGISGPAFWGLINPEWSLCNKGRRQSPVNLEPEKLLFDPNLRFLHIDKHRINGLISNTGHSVIFTVENETRHHINITGGPLSYKYQFHEIHIHYGLHDQFGSEHAINGYSFPAEIQIFGFNSQLYSNFSEALHKAQGIVSISLLLQVCMCTLLFCPAF

Summary

Similarity
Belongs to the alpha-carbonic anhydrase family.
EMBL
NWSH01000817    PCG74067.1    AGBW02011532    OWR46506.1    KQ460205    KPJ16906.1    + More
KQ971338    EFA01627.2    GEZM01014016    JAV92220.1    GEDC01008055    JAS29243.1    RSAL01000152    RVE45719.1    KQ459299    KPJ02004.1    AXCN02001338    AXCN02001339    GL443910    EFN61508.1    KQ977394    KYN03067.1    NNAY01004105    OXU18361.1    LBMM01000566    KMQ98048.1    GL451483    EFN79231.1    GL765434    EFZ16295.1    QOIP01000003    RLU24779.1    ADTU01005290    ADTU01005291    CH933810    EDW07862.1    KRF94246.1    KRF94247.1    KRF94248.1    AAAB01008847    EAA06857.3    CH940651    EDW65771.1    KQ981856    KYN34511.1    CH379065    EDY73168.1    CH964239    EDW82010.2    CH916370    EDW00539.1    CH954180    EDV46225.1    CM000162    EDX02876.1    AE014298    AY051620    AAF46521.2    AAK93044.1    AFH07307.1    CH902635    EDV33756.2    CVRI01000004    CRK87256.1    OUUW01000003    SPP78011.1    KK852756    KDR17090.1    GGMS01003157    MBY72360.1    GAMC01011920    JAB94635.1    GBYB01009305    GBYB01009306    JAG79072.1    JAG79073.1    DS235842    EEB18246.1    GFXV01005100    MBW16905.1    GFDL01003570    JAV31475.1    AXCM01015173    JRES01001070    KNC25794.1    EAA06900.6    KQ435758    KOX75822.1    CCAG010009368    CCAG010009369    GALX01005737    JAB62729.1    FJ612599    ACM89452.1    AXCN02001216    CM000366    EDX17534.1    EFA02589.2    CVRI01000057    CRL02345.1    ADMH02001740    ETN61238.1    CH477481    EAT40222.1    ATLV01017171    ATLV01017172    ATLV01017173    KE525157    KFB41928.1    CP012528    ALC48332.1    CH477197    EAT48348.1    GGFL01000598    MBW64776.1    JRES01001480    KNC22587.1    EDX17359.1    GAIX01005371    JAA87189.1    CH902622    EDV34317.1    GEDC01027548    JAS09750.1    EDX02345.2    CH480865    EDW53653.1    EDV47494.1    BT024405    AAF46274.4    ABC86467.1    AHN59457.1    SPP78339.1    CH379064    EDY73119.1    CH479193    EDW26804.1    GEDC01028732    JAS08566.1    KRF99656.1    CH940655    EDW66214.2    ALC49720.1    KQ414663    KOC65310.1    CH933812    EDW05909.2    KQ460627    KPJ13476.1    GFTR01004875    JAW11551.1    KZ149916    PZC77937.1    GAMC01002279    JAC04277.1   
Pfam
PF00194   Carb_anhydrase
Interpro
IPR036398   CA_dom_sf        + More
IPR041878   alpha_CARP_X/XI       
IPR023561   Carbonic_anhydrase_a-class       
IPR001148   CA_dom       
IPR018347   CAH2       
SUPFAM
SSF51069   SSF51069       
Gene 3D
PDB
3MDZ     E-value=1.58246e-19,     Score=232

Ontologies

Topology

Length:
192
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
32.2413599999999
Exp number, first 60 AAs:
20.33781
Total prob of N-in:
0.59434
POSSIBLE N-term signal
sequence
outside
1  -  192
 
 

Population Genetic Test Statistics

Pi
189.659873
Theta
166.084086
Tajima's D
0.238838
CLR
0.24601
CSRT
0.434128293585321
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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