SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07824
Annotation
PREDICTED:_uncharacterized_protein_LOC106131292_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.385 Nuclear   Reliability : 1.149
 

Sequence

CDS
ATGGAAAGTCATACAGTTGCTGTATATCATTTTTTGGATTGGGAGTCTGCAATGAATCGGCTTAGTGAAAAAGCTGTGCTCCTCCTGTCAAAAAAATATACAGATTATGTACCATCTGAAAATTACAAAAAACAGTACAATATTAGTGAAAAAATGATGCTAGATATTATGAAAGTTTTGGGAGATTGTCGAGGCGGCCAAAATTATGTCATAGCTGAACATATTTTAACCCACCATCAAAGAGGAGATATAATCATTTGCAATGATCACAATGGAAAGCCTATGCCAGTCAAAGAAGCATTTAAAAATGATACATTTGGGTATATTCGGAAGCCTCCTGATGACAATGATTGGATTGTACTTATAATAGGTGGAAAAAATTCTCTAATTCAGAACTGTAATGTACCTACAGGACAGTTTCAGACAAAAATTCGAGAACTTGCAGCTTTAGGCTACACTCCAATATTGGTGCCATGGAAAACATATTCACAACTAGATAATTTTGAAGAGAAAGAAAGTTATCTTTGTAGCTTAATCGAAAACAGATCAAGGAAAAATCATAGTTGTACTGATACTGTATTTAATAGTCTTCATAGTCATAATTCTTAG
Protein
MESHTVAVYHFLDWESAMNRLSEKAVLLLSKKYTDYVPSENYKKQYNISEKMMLDIMKVLGDCRGGQNYVIAEHILTHHQRGDIIICNDHNGKPMPVKEAFKNDTFGYIRKPPDDNDWIVLIIGGKNSLIQNCNVPTGQFQTKIRELAALGYTPILVPWKTYSQLDNFEEKESYLCSLIENRSRKNHSCTDTVFNSLHSHNS

Summary

EMBL
NWSH01002871    PCG67410.1    ODYU01009651    SOQ54229.1    KQ460205    KPJ16898.1    + More
GAIX01004147    JAA88413.1    KQ459606    KPI91272.1    AGBW02012794    OWR44429.1    JTDY01001600    KOB73408.1    NEVH01019960    PNF22310.1    KK852945    KDR13439.1    GEDC01000316    JAS36982.1    KQ971344    KYB27089.1    KB632413    ERL95272.1    APGK01055293    KB741261    ENN71646.1    GDRN01058296    GDRN01058294    JAI65611.1    GEZM01003867    JAV96513.1    GEZM01003866    JAV96514.1    GEZM01003868    JAV96512.1    CH479200    EDW29735.1    GDKW01002538    JAI54057.1    OUUW01000019    SPP89241.1    CH902622    EDV34659.1    CH379064    EAL31920.1    CH940651    EDW65612.1    CCAG010023071    GFTR01007500    JAW08926.1    CH477485    EAT40164.1    CM000162    EDX02951.1    CH954180    EDV46150.1    GDHF01032608    GDHF01015780    JAI19706.1    JAI36534.1    GAKP01019761    GAKP01019759    JAC39191.1    CH916370    EDW00141.1    CH478072    EAT34100.1    CM000366    EDX17570.1    AY260056    AAO85035.1    AE014298    AY071525    AY260057    AAF46606.1    AAL49147.1    AAO85037.1    GFDF01007584    JAV06500.1    CH480830    EDW45729.1    CVRI01000062    CRL04212.1    GBXI01001585    JAD12707.1    GAMC01004218    JAC02338.1    GAMC01004221    JAC02335.1    KQ976956    KYN06823.1    CH963851    EDW75305.2    JXJN01001458    GBYB01013876    JAG83643.1    AY260055    AAO85033.1    CP012528    ALC48813.1    KK107273    QOIP01000012    EZA53791.1    RLU16334.1    CH933815    EDW08055.2    AXCM01000597    GL888102    EGI67520.1    KQ980071    KYN17853.1    GBRD01010893    JAG54931.1    AXCN02001237    GFDL01001078    JAV33967.1    ADTU01000071    UFQS01000524    UFQT01000524    SSX04590.1    SSX24953.1    SSX04591.1    SSX24954.1    GDHC01006101    JAQ12528.1    JRES01000290    KNC32715.1   
Pfam
PF06743   FAST_1        + More
PF08373   RAP
PF08368   FAST_2
PF01326   PPDK_N
PF00391   PEP-utilizers
PF10568   Tom37
PF17171   GST_C_6
Interpro
IPR013584   RAP        + More
IPR010622   FAST_Leu-rich       
IPR013579   FAST_2       
IPR016024   ARM-type_fold       
IPR002192   PPDK_PEP-bd       
IPR013815   ATP_grasp_subdomain_1       
IPR036637   Phosphohistidine_dom_sf       
IPR008279   PEP-util_enz_mobile_dom       
IPR036282   Glutathione-S-Trfase_C_sf       
IPR033468   Metaxin_GST       
IPR019564   Sam37/metaxin_N       
SUPFAM
SSF48371   SSF48371        + More
SSF52009   SSF52009       
SSF47616   SSF47616       
Gene 3D

Ontologies

Topology

Length:
202
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00691
Exp number, first 60 AAs:
0.00015
Total prob of N-in:
0.12663
outside
1  -  202
 
 

Population Genetic Test Statistics

Pi
129.957509
Theta
141.519751
Tajima's D
-0.394449
CLR
136.393794
CSRT
0.264336783160842
Interpretation
Uncertain
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