Gene

KWMTBOMO07822

Pre Gene Modal

BGIBMGA000927

Annotation

PREDICTED:_sodium-_and_chloride-dependent_glycine_transporter_1_[Bombyx_mori]

Location

Bomo_Chr13(+):7472363-7483051      View in EpiBrowser

Full name

Transporter      

Location in the cell

PlasmaMembrane   Reliability : 4.968

CDS

ATGGAAAGCTCAGCCTATATTCCCGCAGTCACTAAAAGTATTCCGGCCATGGACGTCAAATTTTCTGAAGGTGATGAAGAAAAGTCAAAAGCTCCTCTAAGTGAGGAAATTGAGCCGGAACGTGGTAACTGGACGGGACGGTTTGATTTCCTTTTGTCTTTATTGGGATACAGTGTCGGTTTAGGAAACGTGTGGCGGTTTCCTTATCTTTGCTACAATAATGGCGGAGGTGCTTTTCTGATTCCATTTACGGTGATGCTCGTGATAGCTGGTCTGCCACTGATGTTTATGGAACTGTCTTTCGGTCAATATGCTGCTTTGGGTCCTGTTGCCGTTTACAACAAATTCTGTCCTCTCTTTCGAGGGCTTGGATACGGCATGGTCATTGTTTCTAGTATTGTCATGCTATATTACAATCTGATTATAGCTTGGACAATATTTTACATGACTGTCTCATTTTCGAGTATATTCTATCAATTACCTTGGCAAAATTGCAAGGCTGAATGGAGTACAAAACATTGCTACTCTTATGAAGAAGCAGACGAATGCGAAGCTCAAAACGGAACGTACTATTTGAGACAATGTTTCAACCAGAGCTATTCAGTTTCACACAATATAACGGCCTTAGCCAAAACCGCGCTTAGAAGACCTCCAGCTGAAGAATACTTTACGAACCAAGTGCTAGGTTTATCGAGTGGAATAGAGGAGACGGGCGAAATTCGTTTGGGAATGGCTATGTGTTTGTTAGCTGCTTGGGTGATTGTCTTTTTATGCCTGTGCAAAGGAGTGCAGTCTTCTGGCAAGGTGGTTTATTTTACTGCTCTGTTCCCATACGTGGTTTTGGTAATCCTATTTTTCCGAGGAGTGACATTACCTGGCGCAATTACTGGTATTCTATTTTACCTTACACCGGATTTTAGTCAGCTAGCCAATGCTCAGGTATGGGGAGATGCGGCTGTTCAAATATTTTTTGCATTAAGTCCAGCATGGGGTGGTCTGATCACACTTTCTTCATATAACAAATTCTCTAACAATTGCTATATAGATTCCCTAATAGTGGCCGTGTCGAACATAGCGACATCATTTTTTGCCGGTTTGGTAATATTCTCAGTAATCGGTTTTCTGGCACATGAGTTAAATGTGAGTGTAGATCGCGTGGTTGATCAGGGAGCAGGACTTGCCTTCATCGTCTATCCAGAGGTTGTGACAAGGCTGCCTATTTCACCGCTTTGGTCCATTTTGTTTTTTGTTATGCTTTTGACCCTTGGACTGGATTCACAGTTTGCATTGATGGAAACCGTTACAACTGCCATATTAGACAGATTTCCCAACTTCCGCCAGAAAAAAGGCTGGGTAGTGTTTATTGTTGCTGTTTTTGGATATCTAGGTGGACTCATCTTTACTACGAACAGTGGTATGTACTGGCTGCAACTGATGGATAAATATGCTGCGAATTGGTCGGTCCTGATCATAGCCATTGGAGAATGCATTCTCATTGCTTGGATATATGGTGCGGAGAAATTCTGCGGGGATATTCAGCGTATGATTGGTCGTCAGTCCAAATTGTGGGTGTACTTTTGGAGCGCTATGTGGCGCATTATCACCCCCGCTGCATTGGTGTTCATCCTAGTGTTCAACTGGATTGAGTACAAGCCTGCTTCGTATGGGCACTATGTTTATCCAATGTGGGCCGATGCTGTGGGTTGGACATTGGGAGTGCTACCCGTCGTCGTCGTTGTGCTGATGGCTGTCGATCAGATTTGCAGTGGCCCTGATGATCTGACCATAATGGAGAAAGCACGAGTACTGGCACGACCGACTGAAGAATGGGGTCAAGCGGGTTCTACGGCAACGTGCTTGTCTACTCTGCGCGTTGAAACAGAGCTTTCTCCGCCAGTGCTGCTTCTGCACGGACGCCCTGTGTTAAGGGAGCGTGGTGCTTGA

Protein

MESSAYIPAVTKSIPAMDVKFSEGDEEKSKAPLSEEIEPERGNWTGRFDFLLSLLGYSVGLGNVWRFPYLCYNNGGGAFLIPFTVMLVIAGLPLMFMELSFGQYAALGPVAVYNKFCPLFRGLGYGMVIVSSIVMLYYNLIIAWTIFYMTVSFSSIFYQLPWQNCKAEWSTKHCYSYEEADECEAQNGTYYLRQCFNQSYSVSHNITALAKTALRRPPAEEYFTNQVLGLSSGIEETGEIRLGMAMCLLAAWVIVFLCLCKGVQSSGKVVYFTALFPYVVLVILFFRGVTLPGAITGILFYLTPDFSQLANAQVWGDAAVQIFFALSPAWGGLITLSSYNKFSNNCYIDSLIVAVSNIATSFFAGLVIFSVIGFLAHELNVSVDRVVDQGAGLAFIVYPEVVTRLPISPLWSILFFVMLLTLGLDSQFALMETVTTAILDRFPNFRQKKGWVVFIVAVFGYLGGLIFTTNSGMYWLQLMDKYAANWSVLIIAIGECILIAWIYGAEKFCGDIQRMIGRQSKLWVYFWSAMWRIITPAALVFILVFNWIEYKPASYGHYVYPMWADAVGWTLGVLPVVVVVLMAVDQICSGPDDLTIMEKARVLARPTEEWGQAGSTATCLSTLRVETELSPPVLLLHGRPVLRERGA

Similarity

Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.

Uniprot

H9IUJ7   A0A2A4IXB3   A0A2H1VCL0   A0A212EKK6   A0A194RHH9   A0A194PDE3   + More
A0A3S2TJ37   B4KUD0   B4JVT7   A0A1A9ZWE0   A0A0Q9W2X3   W8B744   A0A1W4UN35   A0A3B0JQM0   A0A1A9WIQ9   A0A1A9Y0M4   B4MYD7   B3ME84   B4I8T9   A0A0J9RJZ1   B3NPT0   A0A1B0G7Q2   Q9W1J0   B4GBK6   A0A0M3QV49   Q293F9   Q1RKX2   A0A1I8P5N5   A0A336MWS0   A0A1I8MXQ6   A0A336L6B9   B4QB00   A0A067RIW3   A0A1A9V8D0   A0A0L7LJZ6   T1J119   K7IZ11   A0A088AI46   A0A0C9R7Y9   A0A232EZ04   A0A310S8J2   A0A154PE44   A0A0J7L5Z7   E2AXI8   A0A195C6X5   E2C7A6   E9IGU1   A0A026W0T8   A0A3L8DL60   A0A0M9A3T8   A0A158NDY4   F4X1U5   A0A195D811   B0X6F5   A0A195ERF8   A0A1S4EVF3   A0A182QHH5   A0A182YIU5   Q17PP5   A0A195BPQ9   A0A182S8C3   A0A182GXJ7   A0A151X506   A0A1S3IGE0   A0A182JZT2   A0A182RJT7   A0A084VUQ8   A0A182JEC8   A0A182FBW4   A0A182W3X9   W5JEQ0   A0A182UN64   A0A182XLE7   A0A182PU54   B7QKT1   A0A1S4H443   Q7QDY5   A0A182HXE5   A0A1Y3BGP4   R7UP58   A0A0L7QM48   A0A182NDF0   A0A2T7PJ72   A0A182LVW0   A0A2J7PZE2   V4AWQ3   A0A0L8HHE8   A0A210QS97   A0A2A3ECZ9   A0A182TNY2   A0A2P8ZEE6   A0A3S0ZAP2   A0A1S3J6C7   A0A1S3J4T4   A0A1S3J4N5   A0A1S3J556   A0A1S3J552   K1PL84   T1FPK8  

Pubmed

19121390    22118469    26354079    17994087    24495485    22936249    + More
10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    15632085    25315136    24845553    26227816    20075255    28648823    20798317    21282665    24508170    30249741    21347285    21719571    25244985    17510324    26483478    24438588    20920257    23761445    12364791    23254933    28812685    29403074    22992520   

EMBL

BABH01000949    NWSH01005941    PCG63822.1    ODYU01001837    SOQ38580.1    AGBW02014254    + More
OWR42013.1    KQ460205    KPJ16894.1    KQ459606    KPI91267.1    RSAL01000102    RVE47442.1    CH933808    EDW10717.2    CH916375    EDV98075.1    CH940648    KRF79420.1    GAMC01009565    JAB96990.1    OUUW01000001    SPP75949.1    CH963894    EDW77126.2    CH902619    EDV35479.1    CH480824    EDW57014.1    CM002911    KMY96122.1    CH954179    EDV56871.1    CCAG010016890    AE013599    AAF47069.2    CH479181    EDW31301.1    CP012524    ALC41763.1    CM000071    EAL24652.3    BT025088    ABE73259.1    UFQT01002105    SSX32697.1    UFQS01002192    UFQT01002192    SSX13456.1    SSX32887.1    CM000362    EDX08437.1    KK852446    KDR23737.1    JTDY01000893    KOB75526.1    JH431752    GBYB01002886    GBYB01012654    JAG72653.1    JAG82421.1    NNAY01001559    OXU23601.1    KQ770716    OAD52621.1    KQ434886    KZC10146.1    LBMM01000604    KMQ97973.1    GL443590    EFN61826.1    KQ978251    KYM95918.1    GL453340    EFN76219.1    GL763054    EFZ20192.1    KK107503    EZA49623.1    QOIP01000006    RLU21185.1    KQ435742    KOX76670.1    ADTU01013074    GL888551    EGI59602.1    KQ981153    KYN08992.1    DS232412    EDS41438.1    KQ981993    KYN30808.1    AXCN02002125    CH477190    EAT48706.1    KQ976424    KYM88495.1    JXUM01020584    KQ560576    KXJ81836.1    KQ982548    KYQ55298.1    ATLV01016988    KE525139    KFB41702.1    ADMH02001609    ETN61818.1    ABJB010067951    ABJB010644635    DS961919    EEC19453.1    AAAB01008849    EAA07088.4    APCN01005193    MUJZ01025359    OTF79003.1    AMQN01001368    KB301771    ELU05176.1    KQ414900    KOC59670.1    PZQS01000003    PVD33440.1    AXCM01000614    NEVH01020335    PNF21701.1    KB201304    ESO97961.1    KQ418159    KOF88641.1    NEDP02002194    OWF51610.1    KZ288293    PBC29036.1    PYGN01000081    PSN54866.1    RQTK01000942    RUS73387.1    JH818327    EKC24822.1    AMQM01000267    KB095811    ESO12934.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000283053    + More
UP000009192    UP000001070    UP000092445    UP000008792    UP000192221    UP000268350    UP000091820    UP000092443    UP000007798    UP000007801    UP000001292    UP000008711    UP000092444    UP000000803    UP000008744    UP000092553    UP000001819    UP000095300    UP000095301    UP000000304    UP000027135    UP000078200    UP000037510    UP000002358    UP000005203    UP000215335    UP000076502    UP000036403    UP000000311    UP000078542    UP000008237    UP000053097    UP000279307    UP000053105    UP000005205    UP000007755    UP000078492    UP000002320    UP000078541    UP000075886    UP000076408    UP000008820    UP000078540    UP000075901    UP000069940    UP000249989    UP000075809    UP000085678    UP000075881    UP000075900    UP000030765    UP000075880    UP000069272    UP000075920    UP000000673    UP000075903    UP000076407    UP000075885    UP000001555    UP000007062    UP000075840    UP000014760    UP000053825    UP000075884    UP000245119    UP000075883    UP000235965    UP000030746    UP000053454    UP000242188    UP000242457    UP000075902    UP000245037    UP000271974    UP000005408    UP000015101   

PRIDE

H9IUJ7    Q9W1J0    Q1RKX2   

Pfam

PF00209   SNF        + More
PF07690   MFS_1

Interpro

IPR037272   SNS_sf        + More
IPR000175   Na/ntran_symport       
IPR011701   MFS       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR016024   ARM-type_fold       

SUPFAM

SSF161070   SSF161070        + More
SSF103473   SSF103473       
SSF48371   SSF48371       

CDD

cd06174  MFS

ProteinModelPortal

H9IUJ7   A0A2A4IXB3   A0A2H1VCL0   A0A212EKK6   A0A194RHH9   A0A194PDE3   + More
A0A3S2TJ37   B4KUD0   B4JVT7   A0A1A9ZWE0   A0A0Q9W2X3   W8B744   A0A1W4UN35   A0A3B0JQM0   A0A1A9WIQ9   A0A1A9Y0M4   B4MYD7   B3ME84   B4I8T9   A0A0J9RJZ1   B3NPT0   A0A1B0G7Q2   Q9W1J0   B4GBK6   A0A0M3QV49   Q293F9   Q1RKX2   A0A1I8P5N5   A0A336MWS0   A0A1I8MXQ6   A0A336L6B9   B4QB00   A0A067RIW3   A0A1A9V8D0   A0A0L7LJZ6   T1J119   K7IZ11   A0A088AI46   A0A0C9R7Y9   A0A232EZ04   A0A310S8J2   A0A154PE44   A0A0J7L5Z7   E2AXI8   A0A195C6X5   E2C7A6   E9IGU1   A0A026W0T8   A0A3L8DL60   A0A0M9A3T8   A0A158NDY4   F4X1U5   A0A195D811   B0X6F5   A0A195ERF8   A0A1S4EVF3   A0A182QHH5   A0A182YIU5   Q17PP5   A0A195BPQ9   A0A182S8C3   A0A182GXJ7   A0A151X506   A0A1S3IGE0   A0A182JZT2   A0A182RJT7   A0A084VUQ8   A0A182JEC8   A0A182FBW4   A0A182W3X9   W5JEQ0   A0A182UN64   A0A182XLE7   A0A182PU54   B7QKT1   A0A1S4H443   Q7QDY5   A0A182HXE5   A0A1Y3BGP4   R7UP58   A0A0L7QM48   A0A182NDF0   A0A2T7PJ72   A0A182LVW0   A0A2J7PZE2   V4AWQ3   A0A0L8HHE8   A0A210QS97   A0A2A3ECZ9   A0A182TNY2   A0A2P8ZEE6   A0A3S0ZAP2   A0A1S3J6C7   A0A1S3J4T4   A0A1S3J4N5   A0A1S3J556   A0A1S3J552   K1PL84   T1FPK8  

PDB

4XPF     E-value=7.07287e-122,     Score=1121

KEGG

101736810    K05038 solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9 | (RefSeq) sodium-

GO

GO:0005328   GO:0016021   GO:0015293   GO:0042752   GO:1903804   GO:0015375   GO:0005326   GO:0015816   GO:0006836   GO:0015179   GO:0005283   GO:0015187   GO:0005886   GO:0006098   GO:0003824   GO:0006423   GO:0022891   GO:0003707   GO:0051537  

PANTHER

PTHR11616  

Length:

647

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

278.072639999999

Exp number, first 60 AAs:

9.50051

Total prob of N-in:

0.42724

inside

1  -  49

TMhelix

50  -  69

outside

70  -  78

TMhelix

79  -  101

inside

102  -  121

TMhelix

122  -  144

outside

145  -  239

TMhelix

240  -  262

inside

263  -  268

TMhelix

269  -  291

outside

292  -  317

TMhelix

318  -  340

inside

341  -  352

TMhelix

353  -  375

outside

376  -  406

TMhelix

407  -  429

inside

430  -  449

TMhelix

450  -  472

outside

473  -  481

TMhelix

482  -  504

inside

505  -  524

TMhelix

525  -  547

outside

548  -  561

TMhelix

562  -  584

inside

585  -  647

 

 

Pi

289.971566

Theta

200.995

Tajima's D

1.198845

CLR

0.162075

CSRT

0.712964351782411

Interpretation

Uncertain