SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07820  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001218
Annotation
PREDICTED:_97_kDa_heat_shock_protein_isoform_X1_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.592 Nuclear   Reliability : 2.086
 

Sequence

CDS
ATGGCTGCTATGTCCGTCATTGGAATTGATTTTGGTAATGAATCCTGCTATATTGCTGTGGCTAAAGCAGGTGGGATAGAGACAATAGCCAATGATTACAGTCTTCGAGGGACACCATCATGTGTTGCTTTTTCACAAAAGAATCGAATATTGGGTGTGGCAGCCAAGAACCAAATGGTGACCAATATGAAGAATACTGTATTTGGTTTCAAACGACTTCTGGGAAGAAAATTTTCAGACCCTCTTGTTCAAAAAGAATTAAAACATTTCCCTTTCAAGGTTGAACAGAGGTCTGATGGCGGTATTGGAATAAGAGTCAACTACCTCAATGAAGACAATGTCTTTACCCCTGAGCAGATAACAGCCATGTTGTTGACAAAACTAAAAGATGTTGCAGCAACAGCTTTACAGACTCAAATCAACGACTGTGTGATATCTGTTCCCAGCTATTTCACGAATGCTGAAAGAAATGCTCTTTTGAATGCCGCTGGTATTGCTGGTCTTAATGTATTGCGCCTCATGAACGAGACAACTGCGACAGCTTTAACTTATGGAATTTATAAACAAGATCTTCCTGGTGCTGAAGAGAAACCACGAAATGTTGTCTTTGTCGACTTTGGTCACAGTTCTTTACAGGTTTCAGCTTGTGCTTTCAATAAGGGTAAGCTGCGTATTCTCGCTACTGCAACCGATGCTCAGTGCGGTGGACGAGACATTGACATGGCTTTAGCTGATTACTTCACTCAAGATTTTGTGACAAGATATAAATTAGACGCCAGAAAAAATCAAAGGGCTTATCTTCGTCTTCTGCAAGAAGTTGAGAAATTGAAAAAACAAATGTCTGCTAACAGTACTCGTTTACCACTTAACATTGAGTGCTTTATGGAAGAACGAGATGTATCTGGAGATATGCAGCGTTCTCAGATGGAACAAATATGTGCTGAAACATTTAACCGCGTTGAAAGAACCTTAAGAGCTATTCTACATAATGCAAAACTAAGGTCTGAAGACATCCACTCTGTTGAAATTGTTGGTGGATCCACCAGAATCCCTGCAGTTAAGAGTTTGATTGAACAAGCGTTTGGCAAGCATGCTTCCACAACCTTGAATCAGGACGAGGCGGTGGCTCGCGGATGCGCGCTACAGTGCGCCATGCTGAGCCCGGCCGTACGCGTGCGTGAGTTCAGCATCACCGACGTGCAGCCCTACGCCGTGCGCCTCGCCTGGGACGCCGCCAGAAACGAGGACGGTGATATGGAGGTATTCCCTGCTTTTCACGCTGCACCATTTTCAAAAATGTTAACATTCTACAGGAAAGAGCCATTTTCTGTCAGTGCCTATTATTCTGATCAAGTACCTTATCCGGACACATTTATTGGCCAGTGGCAAATCAAAGATGTCCAGCCCACACCTGAAGGGGAATCGCAAAAAGTGAAATTGAAAGTGAGGGTGAACATTCATGGCATCATAACAGTCGCTTCGGCTTCACTTGTTGAAAAGAAGCAGGACACTACACAGAATGAGAACATAGAAATGGAAAATAGTAATGAGAATGCTCAAAATCAGGATACACCTATGGAAACGAATGGAGGAAATCAAGACCAGCAACAACAGAATGGTCCTGAGAACAACCAAGAGGAGAGTGATGATAAAAAGGATAAATCCAAGGATAAGTCAAAGAAGGTTCTTGTGAAAACTGTGGAGCTGCCCATTGAAGCACAAACACATGGTCTATCAGTGCATGAACTAAATGGATATGTTGAACAAGAGGGCAAAATGCAAGCTCAAGATCGGCAAGAGAAAGAAAGAGCAGATGCTCGTAATGCTCTTGAAGAATATGTTTACGAATTGCGAGGGAAACTGTCTGAAGGCGAAACCCTGCATGATTTTGTTGCAGAAGATCAACGTAATAAGCTTGTCAATCATCTTGATTCTGTTGAACAATGGCTCTATGATGAAGGTGAAGACCAAAATAGACAGGTGTACAGTGATAAGCTGAGCGAGTTGAAAACTGAAGGCGAGCCGATCAAACAAAGGCGTCTTGAGTTTGAGCTACGTCCTGGGGCTTTAGATGAGTTTGCTTTATCCATCCAACTCACCAACAAAGCTGTTGATTTATACAAAGCTGGTGACGCTAAATTTTCACACTTGGCGGAAACAGAGGTTCAGAAAGTGATAGACGCATCTAAAAATGCCCTAACTTGGCTCGAGACTGCAAGGCAAGCGTTAGCACACACGCCACGTCATCAGCAACCATCGCACACTACTCATCAAATCCGTCAAGAACGTCAGAATTTTGAGAACCTCGTGCATCCAATTTTGAATAAAGTTAAACCAAAAGAGAAAACACCACCTCCTTCCAATCAGACTGCGGGAGACGGACAGGCTGATGGTAACAAGGATGCGCCTTCGACTCAATCTCAAGAGCAAATGGATGTTGAATAA
Protein
MAAMSVIGIDFGNESCYIAVAKAGGIETIANDYSLRGTPSCVAFSQKNRILGVAAKNQMVTNMKNTVFGFKRLLGRKFSDPLVQKELKHFPFKVEQRSDGGIGIRVNYLNEDNVFTPEQITAMLLTKLKDVAATALQTQINDCVISVPSYFTNAERNALLNAAGIAGLNVLRLMNETTATALTYGIYKQDLPGAEEKPRNVVFVDFGHSSLQVSACAFNKGKLRILATATDAQCGGRDIDMALADYFTQDFVTRYKLDARKNQRAYLRLLQEVEKLKKQMSANSTRLPLNIECFMEERDVSGDMQRSQMEQICAETFNRVERTLRAILHNAKLRSEDIHSVEIVGGSTRIPAVKSLIEQAFGKHASTTLNQDEAVARGCALQCAMLSPAVRVREFSITDVQPYAVRLAWDAARNEDGDMEVFPAFHAAPFSKMLTFYRKEPFSVSAYYSDQVPYPDTFIGQWQIKDVQPTPEGESQKVKLKVRVNIHGIITVASASLVEKKQDTTQNENIEMENSNENAQNQDTPMETNGGNQDQQQQNGPENNQEESDDKKDKSKDKSKKVLVKTVELPIEAQTHGLSVHELNGYVEQEGKMQAQDRQEKERADARNALEEYVYELRGKLSEGETLHDFVAEDQRNKLVNHLDSVEQWLYDEGEDQNRQVYSDKLSELKTEGEPIKQRRLEFELRPGALDEFALSIQLTNKAVDLYKAGDAKFSHLAETEVQKVIDASKNALTWLETARQALAHTPRHQQPSHTTHQIRQERQNFENLVHPILNKVKPKEKTPPPSNQTAGDGQADGNKDAPSTQSQEQMDVE

Summary

Similarity
Belongs to the heat shock protein 70 family.
EMBL
BABH01000949    ODYU01001837    SOQ38582.1    NWSH01005941    PCG63826.1    PCG63824.1    + More
KQ460205    KPJ16892.1    PCG63825.1    GAIX01005408    JAA87152.1    NEVH01015305    PNF27137.1    GEDC01027649    JAS09649.1    GECZ01018560    JAS51209.1    GECZ01003896    JAS65873.1    GEZM01103043    JAV51588.1    GEZM01103042    JAV51589.1    KK852655    KDR19282.1    MG265905    AXU24961.1    GFTR01008090    JAW08336.1    KQ971338    EFA02305.1    GBBI01001039    JAC17673.1    JR038766    AEY58400.1    KB631708    ERL85506.1    APGK01030182    APGK01030183    APGK01030184    APGK01030185    APGK01030186    KB740761    ENN79035.1    KQ979608    KYN20273.1    KQ981836    KYN35049.1    GAHY01000060    JAA77450.1    GL446268    EFN88179.1    GBHO01037698    GBHO01021439    GBRD01009141    JAG05906.1    JAG22165.1    JAG56680.1    GDHC01013855    JAQ04774.1    GDAI01000412    JAI17191.1    GBYB01011304    JAG81071.1    GECZ01017568    JAS52201.1    GANO01001126    JAB58745.1    GECZ01023917    JAS45852.1    KU932300    APA33936.1    UFQS01000524    UFQT01000524    SSX04605.1    SSX24968.1    SSX04604.1    SSX24967.1    AK376247    BAK07442.1    ABLF02017872    GGMS01009821    MBY79024.1    CH477328    EJY57568.1    GFDL01003148    JAV31897.1    GAPW01000239    JAC13359.1    GFXV01005608    MBW17413.1    GGMR01015703    MBY28322.1    GBXI01010698    GBXI01010361    JAD03594.1    JAD03931.1    CH933809    EDW19398.1    GAKP01011308    GAKP01011306    GAKP01011305    JAC47647.1    GFDF01004042    JAV10042.1    GFDF01004043    JAV10041.1    GAMC01009758    GAMC01009757    JAB96797.1    GDHF01031724    GDHF01026089    GDHF01018165    GDHF01013860    GDHF01002052    JAI20590.1    JAI26225.1    JAI34149.1    JAI38454.1    JAI50262.1    GALA01000137    JAA94715.1    LBMM01002047    KMQ95354.1    GGFM01001479    MBW22230.1    KR058818    AKB96223.1    KR058819    AKB96224.1    KR058820    AKB96225.1    GGFK01002134    MBW35455.1    KA646958    AFP61587.1    GALA01001243    JAA93609.1    GDRN01062059    JAI65116.1    ATLV01013899    ATLV01013900    KE524908    KFB38249.1    CH963847    KRF97623.1    AAAB01008957    EAA10674.3    AHAT01001545    AERX01036628    AERX01036629    KY753873    AVC68725.1   
Pfam
PF00012   HSP70
Interpro
IPR013126   Hsp_70_fam        + More
IPR029047   HSP70_peptide-bd_sf       
IPR029048   HSP70_C_sf       
IPR018181   Heat_shock_70_CS       
SUPFAM
SSF100920   SSF100920        + More
SSF100934   SSF100934       
Gene 3D
PDB
6GFA     E-value=5.17073e-128,     Score=1175

Ontologies

Topology

Length:
814
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01048
Exp number, first 60 AAs:
0.00409999999999999
Total prob of N-in:
0.00055
outside
1  -  814
 
 

Population Genetic Test Statistics

Pi
219.075721
Theta
180.981154
Tajima's D
0.597822
CLR
0
CSRT
0.540122993850307
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
25044914 KENPIQFK 100.00 5e-14
25044914 DVAAEAIAAYSTAVR 96.30 7e-12
26822097 NAIEEYVYEIR 100.00 2e-07
25044914 NEDDKQKETIQAK 100.00 2e-07
28467696 NECTGMEIDGR 100.00 2e-07
25044914 EKTDGPFWPTITK 100.00 2e-07
28556443 NALLNAAGIAGLNVLR 100.00 1e-06
25044914 TPNIVIVSPNVK 100.00 5e-06
26822097 ISEIKTEGEPIK 100.00 2e-04
26280517 SQIPIQIEDAARPEK 100.00 2e-04
28467696 SQMEQICAETFNR 100.00 2e-04
28556443 YNGPPLTLLLDQGSGDK 100.00 2e-04
28556443 QDLPGAEEKPR 100.00 2e-04
25044914 VREEEADGARPAAR 100.00 0.001
28467696 VRDSIISAGPAIDVIQK 100.00 0.001
26822097 GCAIQCAMISPAVR 100.00 0.002
25044914 SEDIAVTNIGVK 100.00 0.002
28467696 SEDIENIAR 100.00 0.002
28556443 QNFENLVHPILNK 100.00 0.002
28556443 AGGIETIANDYSLR 100.00 0.004
28556443 NALTWLETAR 100.00 0.004
28556443 QDLPGAEEKPR 100.00 0.010
28556443 NEDGDMEVFPAFHAAPF 100.00 0.010
28556443 HASTTLNQDEAVAR 100.00 0.011
26822097 IIQEVEK 100.00 0.014
26280517 SPEIGADAITK 100.00 0.014
25044914 SQKPVTYIPDIEDEFNIPFNYFSHIR 100.00 0.014
28467696 SQIYQATIR 100.00 0.014
28556443 AGGIETIANDYSLR 100.00 0.017
28556443 SEDIHSVEIVGGSTR 100.00 0.017
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