Gene

KWMTBOMO07815  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000924

Annotation

mitochondrial_ribosomal_protein_L22_[Bombyx_mori]

Location

Bomo_Chr13(+):7396943-7398335      View in EpiBrowser

Full name

39S ribosomal protein L22, mitochondrial      

Location in the cell

Cytoplasmic   Reliability : 1.612 Mitochondrial   Reliability : 1.66

CDS

ATGACTGTTGATGAAGCACTAAAACAATTAAGTTTTGTCAATAAAAAAGGAGCATTATTTGTAAAGGAAGCTGTATTGGAAGCTCAAGAGATGGCCATCAAAGACCACAATGTAGAATTCAAAAGTAATCTTTGGGTTGCGGAATCGTTTTCAGGAAAAGGTATGGTGTTTAAAGGTATAAGGAGACATGCACGAGGCAGATTGGGTGAGGTGCGCTATAAGTATAGTCACTACTTTGTGAGACTTGAAGAGGGCAAGCCACCTACTGATTATTATAAACGTAAACCATTACTACCTTCAAATCAGTTACAAGATTGGCTAGAACAAATGAGGAGAAGAAAAATAACAAACTCTTATTAA

Protein

MTVDEALKQLSFVNKKGALFVKEAVLEAQEMAIKDHNVEFKSNLWVAESFSGKGMVFKGIRRHARGRLGEVRYKYSHYFVRLEEGKPPTDYYKRKPLLPSNQLQDWLEQMRRRKITNSY

Subunit

Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins.

Similarity

Belongs to the universal ribosomal protein uL22 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  

Feature

chain  39S ribosomal protein L22, mitochondrial

Uniprot

H9IUJ4   Q2F5Y7   A0A2H1VMP0   A0A194PJJ7   A0A2A4IXN2   A0A3S2TIZ5   + More
A0A212EMD0   A0A194RH29   A0A1B0BBH2   A0A0K8TRQ4   T1E7W1   A0A2M3ZJ69   A0A2M3ZJI9   A0A2M3ZJG8   A0A2M3ZBN8   A0A2M4AQ51   A0A2M4AQ70   A0A2M4AQZ2   A0A182FEF4   W5JGX2   A0A1A9W217   A0A084WNP1   A0A2M4C0A7   A0A182J4M4   A0A2M4BZH0   A0A2M4BZD3   A0A034WRN6   A0A023EM72   A0A182HDK8   A0A182Y7S9   A0A182XE07   A0A0K8W6H8   A0A182U201   A0A182KK76   A0A3B0K2V8   A0A182UWF7   A0A182HGL6   A0NCQ2   Q29IK4   A0A182K3F7   B4H2M1   A0A0L0C3I0   B4L2U9   A0A0A1XSH5   B4R629   A0A182SK78   B4IET0   B3NW80   A0A182QTZ6   A0A1W4VVY2   B4JP10   B3MWB9   A0A182PNR7   K7J4I9   B4NPP5   A0A182W4J4   W8B5Q3   B4Q1V2   A0A232ENI5   Q9VXB5   Q17L83   A0A182MIC7   A0A182MZI4   A0A1L8DRC6   A0A1L8DRL3   N6UPK7   A0A1Q3FA60   Q17MC9   A0A067R5G9   A0A1W4XCB3   A0A0M9A9F4   A0A2J7RRW5   A0A336MMY7   A0A1B0DA07   A0A1I8P2J8   A0A0A9WHH0   A0A1I8N1H5   A0A182R9H7   A0A224XZV2   A0A026VZY7   D2A266   B0XJE8   B0XEF8   A0A088A871   A0A154P4Z8   A0A1Y1NAS7   F4WZI0   A0A2A3EA29   A0A069DWD5   E9IE67   A0A2P8ZD17   A0A195DQD9   A0A158NGY5   A0A0M5J882   A0A1B6MNF3   A0A195BVW7   A0A0P4VGA1   T1I6S7   A0A0C9RED5   A0A195ET08  

Pubmed

19121390    26354079    22118469    26369729    20920257    23761445    + More
24438588    25348373    24945155    26483478    25244985    20966253    12364791    14747013    17210077    15632085    17994087    26108605    25830018    20075255    24495485    17550304    28648823    10731132    12537572    17510324    23537049    24845553    25401762    26823975    25315136    24508170    30249741    18362917    19820115    28004739    21719571    26334808    21282665    29403074    21347285    27129103   

EMBL

BABH01000960    DQ311285    ABD36230.2    ODYU01003229    SOQ41712.1    KQ459606    + More
KPI91260.1    NWSH01004714    PCG64727.1    RSAL01000104    RVE47349.1    AGBW02013857    OWR42643.1    KQ460205    KPJ16887.1    JXJN01011439    GDAI01000554    JAI17049.1    GAMD01003303    JAA98287.1    GGFM01007820    MBW28571.1    GGFM01007894    MBW28645.1    GGFM01007849    MBW28600.1    GGFM01005225    MBW25976.1    GGFK01009579    MBW42900.1    GGFK01009624    MBW42945.1    GGFK01009894    MBW43215.1    ADMH02001563    ETN62059.1    ATLV01024644    KE525354    KFB51835.1    GGFJ01009616    MBW58757.1    GGFJ01009302    MBW58443.1    GGFJ01009304    MBW58445.1    GAKP01002519    JAC56433.1    GAPW01004194    JAC09404.1    JXUM01129868    KQ567502    KXJ69404.1    GDHF01021372    GDHF01005531    JAI30942.1    JAI46783.1    OUUW01000015    SPP88597.1    APCN01005672    AAAB01008846    EAU77252.3    CH379063    CH479204    EDW30588.1    JRES01000948    KNC26878.1    CH933810    EDW06916.1    GBXI01000321    JAD13971.1    CM000366    EDX18133.1    CH480832    EDW46184.1    CH954180    EDV46419.1    AXCN02001274    CH916371    EDV92453.1    CH902625    EDV35264.1    AAZX01009232    CH964291    EDW86485.1    GAMC01017929    GAMC01017928    JAB88626.1    CM000162    EDX02527.1    NNAY01003159    OXU19891.1    AE014298    AY070969    CH477217    EAT47492.1    AXCM01002858    GFDF01005071    JAV09013.1    GFDF01005070    JAV09014.1    APGK01022612    KB740436    KB632373    ENN80657.1    ERL93774.1    GFDL01010636    JAV24409.1    CH477207    EAT47820.1    KK852872    KDR14565.1    KQ435720    KOX78569.1    NEVH01000597    PNF43580.1    UFQS01001589    UFQT01001589    SSX11508.1    SSX31075.1    AJVK01028707    GBHO01036390    GBRD01011721    GDHC01001666    JAG07214.1    JAG54103.1    JAQ16963.1    GFTR01002797    JAW13629.1    KK107519    QOIP01000009    EZA49368.1    RLU19120.1    KQ971338    EFA01484.2    DS233497    EDS30265.1    DS232826    EDS25955.1    KQ434820    KZC07015.1    GEZM01007665    JAV95014.1    GL888479    EGI60424.1    KZ288325    PBC28049.1    GBGD01003245    JAC85644.1    GL762556    EFZ21195.1    PYGN01000098    PSN54360.1    KQ980612    KYN15083.1    ADTU01001619    CP012528    ALC49256.1    GEBQ01002545    JAT37432.1    KQ976398    KYM92774.1    GDKW01003382    JAI53213.1    ACPB03010871    GBYB01006705    JAG76472.1    KQ981979    KYN31385.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000283053    UP000007151    UP000053240    + More
UP000092460    UP000069272    UP000000673    UP000091820    UP000030765    UP000075880    UP000069940    UP000249989    UP000076408    UP000076407    UP000075902    UP000075882    UP000268350    UP000075903    UP000075840    UP000007062    UP000001819    UP000075881    UP000008744    UP000037069    UP000009192    UP000000304    UP000075901    UP000001292    UP000008711    UP000075886    UP000192221    UP000001070    UP000007801    UP000075885    UP000002358    UP000007798    UP000075920    UP000002282    UP000215335    UP000000803    UP000008820    UP000075883    UP000075884    UP000019118    UP000030742    UP000027135    UP000192223    UP000053105    UP000235965    UP000092462    UP000095300    UP000095301    UP000075900    UP000053097    UP000279307    UP000007266    UP000002320    UP000005203    UP000076502    UP000007755    UP000242457    UP000245037    UP000078492    UP000005205    UP000092553    UP000078540    UP000015103    UP000078541   

PRIDE

H9IUJ4    Q2F5Y7    Q29IK4    Q9VXB5   

Pfam

PF00237   Ribosomal_L22

Interpro

IPR005727   Ribosomal_L22_bac/chlpt-type        + More
IPR001063   Ribosomal_L22       
IPR036394   Ribosomal_L22/L17_sf       

SUPFAM

SSF54843   SSF54843       

Gene 3D

3.90.470.10    

CDD

cd00336  Ribosomal_L22

ProteinModelPortal

H9IUJ4   Q2F5Y7   A0A2H1VMP0   A0A194PJJ7   A0A2A4IXN2   A0A3S2TIZ5   + More
A0A212EMD0   A0A194RH29   A0A1B0BBH2   A0A0K8TRQ4   T1E7W1   A0A2M3ZJ69   A0A2M3ZJI9   A0A2M3ZJG8   A0A2M3ZBN8   A0A2M4AQ51   A0A2M4AQ70   A0A2M4AQZ2   A0A182FEF4   W5JGX2   A0A1A9W217   A0A084WNP1   A0A2M4C0A7   A0A182J4M4   A0A2M4BZH0   A0A2M4BZD3   A0A034WRN6   A0A023EM72   A0A182HDK8   A0A182Y7S9   A0A182XE07   A0A0K8W6H8   A0A182U201   A0A182KK76   A0A3B0K2V8   A0A182UWF7   A0A182HGL6   A0NCQ2   Q29IK4   A0A182K3F7   B4H2M1   A0A0L0C3I0   B4L2U9   A0A0A1XSH5   B4R629   A0A182SK78   B4IET0   B3NW80   A0A182QTZ6   A0A1W4VVY2   B4JP10   B3MWB9   A0A182PNR7   K7J4I9   B4NPP5   A0A182W4J4   W8B5Q3   B4Q1V2   A0A232ENI5   Q9VXB5   Q17L83   A0A182MIC7   A0A182MZI4   A0A1L8DRC6   A0A1L8DRL3   N6UPK7   A0A1Q3FA60   Q17MC9   A0A067R5G9   A0A1W4XCB3   A0A0M9A9F4   A0A2J7RRW5   A0A336MMY7   A0A1B0DA07   A0A1I8P2J8   A0A0A9WHH0   A0A1I8N1H5   A0A182R9H7   A0A224XZV2   A0A026VZY7   D2A266   B0XJE8   B0XEF8   A0A088A871   A0A154P4Z8   A0A1Y1NAS7   F4WZI0   A0A2A3EA29   A0A069DWD5   E9IE67   A0A2P8ZD17   A0A195DQD9   A0A158NGY5   A0A0M5J882   A0A1B6MNF3   A0A195BVW7   A0A0P4VGA1   T1I6S7   A0A0C9RED5   A0A195ET08  

PDB

6GB2     E-value=5.45401e-26,     Score=285

KEGG

101745675    K02890 large subunit ribosomal protein L22 | (RefSeq) 39S ribosomal protein L22, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0015934   GO:0003735   GO:0006412   GO:0005840   GO:0042255   GO:0005762   GO:0005739   GO:0032543   GO:0009081   GO:0004817   GO:0006423   GO:0016021   GO:0022891   GO:0003707   GO:0051537  

PANTHER

PTHR13501  

Subcellular location

Mitochondrion  

Length:

119

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00314

Exp number, first 60 AAs:

0.003

Total prob of N-in:

0.38638

outside

1  -  119

 

 

Pi

187.169449

Theta

158.537185

Tajima's D

0.654408

CLR

0

CSRT

0.554422278886056

Interpretation

Uncertain