Gene

KWMTBOMO07813

Pre Gene Modal

BGIBMGA001222

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_22_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):7372184-7385212      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.851

CDS

ATGGAAGAGGTAGATTCAATCATTTTACATTTTCTGCGTCAACTGAACCTAAAAATAGATGACAATGTGAAGAACATGTGCGATGTTTCTGTAGAGTTTATTATTGAAGCAGCATCAAAATGCCTAAACGCTATAAATCCATCCTTGAAAGTTCCTCAAAAATTACCAAAAGGAATCTCCCATCGAATCGAAGTAGCTGCTCAGATAGCATCATTTTGCAAAGATTTGGGGTACAAAAATGATGTTGGTTATCAAACATTCCTGTACTATAATGAAGCGGAATTACGGCAAGTATTTATGTTTCTTATTGAGAGACTACCCAATGAAGGAAAACAGAGTTCAGTTTCTGCATCTCTTAAAACAAACCAGTCAACATTGATGAAAGACGTTAGCAACAAGATTTCTGAGGAAATGGAAAAAATATGGGTACCACATTGTTGCAAACCCAATGAGCAACAAAAAGGAATCACTTCAACAAAAAACAATGTTCATTTGTATAATACATTAGAAAATGAGAAAGATTTAATTCAAAAGCTAATACATATACAAGAAATGAATACAAATAGTAGAGATACCAAAGCACAGGACGTTGAAATGCAAAAAGAATCGAAATTAAAAACGGAAGCGTTTACAAAAGAACATAATAAAACTCTTAAAGAATTAAAGGAGACTGCTATAGTGTTACGACAGAAATTAGACACTCTAGAAAGTGAAAGAAATGTTATGAATGTTGAATATTCTCAGGCTCAAGTTTCGTGTGAAAAAGTTGAAGAAGATTTGAAAAATGTTATTAATATTTTAAATAGCATAGGAATTACAGATGAAAATTCAGAGGGCGTTTCAGATGAGGTACTAGAAAAAGTACAAAAAAATATTAACAAACTACATGCAAAAAGTGAAGATTTAACATCAAAAAGTTTGTCATTGAAAGCAGAAATTGAAAATGTCAAGCAGAGTATGAATAGATCTGAGTCTGAAAGAAATAAATACAAAAATATGTTAGGCCATTTAAAAGAATCTGCAAAAGCTATGAAAGAGGAATATGGTCAAAAAGAACATTTGAGAAATCAACTCAAGTCGAAATATGAAAAGTTAAGAGGTGGTAACAAAAGATCCATCTATACGAAACGTATTGTAGAAATAATAAGTAATGTTGATAAACAAAACATTGAAATAAAGAAAATATTAGAAGACACAAGACAGCTACAAAAAGAAATAAATATACTAGAAGGTCAGCTTGAACGGTCTTTCTCTGTTGCAGATGAAACACTGTTTAGGGATGCAAAGAAAGATGATCAAGCAAAGAAAGCATATAAACTACTAGCTCTGCTGCATTCAGAATGTAAAACTATCGTGTCATTAGTTAATGATATAGGATCTTTGCAAAGAGACATTGTTGATTTAGAAGAAAATGTTAAAACAGAAACTGCAAAGAGGACTGAAGATACCTTGGAGAAAATTAAATTTGATATTGCAAAAATTAAAGAAGAAACCTAA

Protein

MEEVDSIILHFLRQLNLKIDDNVKNMCDVSVEFIIEAASKCLNAINPSLKVPQKLPKGISHRIEVAAQIASFCKDLGYKNDVGYQTFLYYNEAELRQVFMFLIERLPNEGKQSSVSASLKTNQSTLMKDVSNKISEEMEKIWVPHCCKPNEQQKGITSTKNNVHLYNTLENEKDLIQKLIHIQEMNTNSRDTKAQDVEMQKESKLKTEAFTKEHNKTLKELKETAIVLRQKLDTLESERNVMNVEYSQAQVSCEKVEEDLKNVINILNSIGITDENSEGVSDEVLEKVQKNINKLHAKSEDLTSKSLSLKAEIENVKQSMNRSESERNKYKNMLGHLKESAKAMKEEYGQKEHLRNQLKSKYEKLRGGNKRSIYTKRIVEIISNVDKQNIEIKKILEDTRQLQKEINILEGQLERSFSVADETLFRDAKKDDQAKKAYKLLALLHSECKTIVSLVNDIGSLQRDIVDLEENVKTETAKRTEDTLEKIKFDIAKIKEET

Uniprot

A0A2H1VLL3   A0A1E1WQR4   A0A2A4JFL2   A0A1E1VZG0   A0A194RHH0   A0A194PDD5   + More
A0A3S2NPF5   A0A212EMB3   A0A026W2Z7   A0A154P9V2   A0A195BSG8   A0A151IMT6   E2BUK9   A0A151XIM8   A0A2M4BJA3   A0A2M4BJ86   A0A182FVD5   A0A182JXY7   A0A2M4BJ92   A0A2M4BJA7   A0A2M4ALB1   A0A2M4ALF0   A0A2M4AFF2   A0A182R0G4   A0A0M4EJR7   A0A1W4UGL9   B4HK80   A0A1A9WC94   A0A151IR88   B3M458   B4KYT5   A0A195FA34   W8BMV2   A0A2P8Y3A9   A0A1V9XIU4   A0A0K8V562   A0A0K2TSG6  

Pubmed

26354079    22118469    24508170    30249741    20798317    17994087    + More
24495485    29403074    28327890   

EMBL

ODYU01003229    SOQ41715.1    GDQN01001740    JAT89314.1    NWSH01001710    PCG70364.1    + More
GDQN01010934    JAT80120.1    KQ460205    KPJ16884.1    KQ459606    KPI91257.1    RSAL01000826    RVE41125.1    AGBW02013857    OWR42640.1    KK107519    QOIP01000009    EZA49409.1    RLU18520.1    KQ434839    KZC07998.1    KQ976417    KYM89608.1    KQ977019    KYN06268.1    GL450721    EFN80618.1    KQ982080    KYQ60181.1    GGFJ01003994    MBW53135.1    GGFJ01003995    MBW53136.1    GGFJ01003998    MBW53139.1    GGFJ01003996    MBW53137.1    GGFK01008077    MBW41398.1    GGFK01008241    MBW41562.1    GGFK01006184    MBW39505.1    AXCN02001109    CP012525    ALC43297.1    CH480815    EDW41821.1    KQ981145    KYN09142.1    CH902618    EDV40420.1    CH933809    EDW17799.1    KQ981720    KYN37288.1    GAMC01015581    JAB90974.1    PYGN01000978    PSN38748.1    MNPL01010213    OQR73272.1    GDHF01018436    JAI33878.1    HACA01011623    CDW28984.1   

Proteomes

UP000218220    UP000053240    UP000053268    UP000283053    UP000007151    UP000053097    + More
UP000279307    UP000076502    UP000078540    UP000078542    UP000008237    UP000075809    UP000069272    UP000075881    UP000075886    UP000092553    UP000192221    UP000001292    UP000091820    UP000078492    UP000007801    UP000009192    UP000078541    UP000245037    UP000192247   

Pfam

PF05667   DUF812        + More
PF01535   PPR
PF12854   PPR_1

Interpro

IPR008530   CCDC22        + More
IPR002885   Pentatricopeptide_repeat       
IPR011990   TPR-like_helical_dom_sf       

Gene 3D

1.25.40.10    

ProteinModelPortal

A0A2H1VLL3   A0A1E1WQR4   A0A2A4JFL2   A0A1E1VZG0   A0A194RHH0   A0A194PDD5   + More
A0A3S2NPF5   A0A212EMB3   A0A026W2Z7   A0A154P9V2   A0A195BSG8   A0A151IMT6   E2BUK9   A0A151XIM8   A0A2M4BJA3   A0A2M4BJ86   A0A182FVD5   A0A182JXY7   A0A2M4BJ92   A0A2M4BJA7   A0A2M4ALB1   A0A2M4ALF0   A0A2M4AFF2   A0A182R0G4   A0A0M4EJR7   A0A1W4UGL9   B4HK80   A0A1A9WC94   A0A151IR88   B3M458   B4KYT5   A0A195FA34   W8BMV2   A0A2P8Y3A9   A0A1V9XIU4   A0A0K8V562   A0A0K2TSG6  

KEGG

101746109    K23343 coiled-coil domain-containing protein 22 | (RefSeq) coiled-coil domain-containing protein 22

GO

GO:0016021  

PANTHER

PTHR15668  

Length:

498

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00095

outside

1  -  498

 

 

Pi

226.668693

Theta

183.371618

Tajima's D

0.927648

CLR

17.73635

CSRT

0.633268336583171

Interpretation

Uncertain