Gene

KWMTBOMO07812

Pre Gene Modal

BGIBMGA000922

Annotation

PREDICTED:_uncharacterized_protein_LOC106131182_[Amyelois_transitella]

Location

Bomo_Chr13(+):7369443-7372173      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.013 Nuclear   Reliability : 1.531

CDS

ATGCTGGAGTCAACGTCACATGCAACTGTTAGACATAGTATCAAATTTGATTATGTTGATGAATTAATACAGATGTTAAAAGATCCTTTAAATTATGGACTGTTCTTGGATGATTATAGTGCAAACATATTACTGAATGAATTACTTGTTAAAAAGAATTACACACAAGCTGCTGATATAGCAGCACTGATAATGTTACAAGAAGAATATAATAATGATATATTATGTAGCTTATGTCAGTATTCTTCTTACATGTTCATAAAAAACTATGTTGAACCAGAGCCAGCTGTCATGGAAGAAAACAACAAAAAAGTGGAAGAAATCAAAATAAGAGTAAAGTTTTTACGGAATCCTTATTTTGATGATCATTTTGACATAAAAGATAGGTTAAAATTGGCTGGGAAAACATTAGCATGGATATCTGAAAAAACATCGAATACTTTAAACAATAACTTACAATTAATTGGTTGGTTGATATATAAGAAATATGATCAGTTATTGGCAACAAGTGAAGAATTATGTACTAATACTAAATTTAGAATTTACAATGAAGTGATTGATCTTCTAAATAAAGAGCTGCATAAGGTAGAACCAGAGAAAAAAGAAGTATTAGAGAAATGTATATCCTTACTGGCAAAAATAGAAATTATTCCTACAAAGCCTTCTTTACAAGCATCTTTAACTGACAATATTGAAAATGCTATTAACAAAACCCAGGAAAAGGATGTAGCAGCACAAAAAGAGTTATTTATTCTTTGGGAAAAAACAAGGCAGTTGAAACTTGAAGAGCAATCACATCGTCTTGACAGAGTAAAACGTGTACAGATTATTGAAGAGAAACAGAGACAACTACAAGAAGAAGAGCAAAAGCTGTGGTTCTTTGAGAATGAGGAAAAAATTGACCTTCAAATTGAAGATAAAGAAAAACTTGTAGATAAAACGCAAACAAAGAAAAAGGTTTTAACAGCAATAGATGAAAACTATATACCACCAGAAATCTTACCCAAACGACGATAA

Protein

MLESTSHATVRHSIKFDYVDELIQMLKDPLNYGLFLDDYSANILLNELLVKKNYTQAADIAALIMLQEEYNNDILCSLCQYSSYMFIKNYVEPEPAVMEENNKKVEEIKIRVKFLRNPYFDDHFDIKDRLKLAGKTLAWISEKTSNTLNNNLQLIGWLIYKKYDQLLATSEELCTNTKFRIYNEVIDLLNKELHKVEPEKKEVLEKCISLLAKIEIIPTKPSLQASLTDNIENAINKTQEKDVAAQKELFILWEKTRQLKLEEQSHRLDRVKRVQIIEEKQRQLQEEEQKLWFFENEEKIDLQIEDKEKLVDKTQTKKKVLTAIDENYIPPEILPKRR

Uniprot

H9IUJ2   A0A1E1WSS1   A0A2H1VLP6   A0A2A4JE51   A0A194RHT2   A0A0L7LK56   + More
A0A194PE07   A0A212EMG2   A0A336LVR3   B0WTU4   A0A1Y1NAY2   A0A182YL71   A0A067QW81   E2A4F7   A0A182N3H0   E9INF2   A0A182QEA1   A0A195FB75   A0A340TBI8   A0A0J7KWP3   A0A0K8TND0   A0A151IR69   A0A2J7Q5A6   A0A182IWY0   A0A151XIY3   A0A182T0C4   A0A084WHR6   A0A182UKU2   N6TU41   A0A182JXY5   A0A026W027   A0A023ERI1   A0A1Q3F805   J3JWX2   Q7PZ97   A0A1W4XL26   A0A182LZ34   A0A182X6U9   A0A1L8E094   A0A1B0CUT6   A0A182UMQ4   A0A154P7V0   A0A182RVB2   A0A182HHA4   A0A195BT54   A0A2M4BNC2   A0A182FVD7   A0A158NF69   E2BUK8   A0A151IMT9   A0A182PQX4   W5JFP6   A0A2M4AMH1   A0A2M4AN83   F4WVU0   A0A2M4AMM5   Q16VX0   A0A232F402   A0A310SST8   A0A1S4FM73   K7JAS7   E9GES7   J9K5K6   A0A2A3EUE6   D2A267   A0A2S2QVE7   A0A2P6KFH8   A0A0P5B2I3   A0A0A9W0J9   A0A0P5MWT0   A0A0N8BQD5   A0A146LW95   A0A164RZR3   A0A3R7PZE4   A0A0P5QMY5   A0A0P5RZP6   A0A0P5ETG5   A0A0P5APG6   A0A0P4XHN6   A0A0P6EBB0   A0A0P5Y206   A0A0P6H9P3   A0A2S2P537   A0A0P5HCT1   A0A2H8TY09   A0A0P5DEQ8   A0A2L2Y8X2   A0A1B6EEN2   A0A0N8ADQ4   A0A0P5LNL1   A0A0P5D2L8   A0A0L7R2I0   R4G398   A0A087ZNP5   A0A1B6KR60   A0A0P5YDY0  

Pubmed

19121390    26354079    26227816    22118469    28004739    25244985    + More
24845553    20798317    21282665    26369729    24438588    23537049    24508170    30249741    24945155    22516182    12364791    14747013    17210077    21347285    20920257    23761445    21719571    17510324    28648823    20075255    21292972    18362917    19820115    25401762    26823975    26561354   

EMBL

BABH01000967    GDQN01001026    JAT90028.1    ODYU01003229    SOQ41716.1    NWSH01001710    + More
PCG70365.1    KQ460205    KPJ16885.1    JTDY01000769    KOB75948.1    KQ459606    KPI91258.1    AGBW02013857    OWR42641.1    UFQT01000174    SSX21121.1    DS232092    EDS34635.1    GEZM01007665    JAV95013.1    KK852942    KDR13503.1    GL436635    EFN71704.1    GL764298    EFZ17903.1    AXCN02001109    KQ981720    KYN37289.1    LBMM01002512    KMQ94718.1    GDAI01001992    JAI15611.1    KQ981145    KYN09141.1    NEVH01017580    PNF23762.1    KQ982080    KYQ60180.1    ATLV01023875    KE525347    KFB49760.1    APGK01054630    KB741250    KB632390    ENN71911.1    ERL94478.1    KK107519    QOIP01000009    EZA49408.1    RLU18525.1    GAPW01001798    JAC11800.1    GFDL01011334    JAV23711.1    BT127740    AEE62702.1    AAAB01008986    EAA00401.4    AXCM01002223    GFDF01001987    JAV12097.1    AJWK01029638    AJWK01029639    KQ434839    KZC07999.1    APCN01002398    KQ976417    KYM89609.1    GGFJ01005137    MBW54278.1    ADTU01013892    GL450721    EFN80617.1    KQ977019    KYN06269.1    ADMH02001629    ETN61705.1    GGFK01008653    MBW41974.1    GGFK01008924    MBW42245.1    GL888398    EGI61670.1    GGFK01008709    MBW42030.1    CH477579    EAT38742.1    NNAY01001068    OXU25259.1    KQ760539    OAD59980.1    AAZX01001971    GL732541    EFX81888.1    ABLF02025685    KZ288186    PBC34759.1    KQ971338    EFA02747.1    GGMS01012267    MBY81470.1    MWRG01013387    PRD25079.1    GDIP01205344    JAJ18058.1    GBHO01042664    GBHO01042663    GBRD01004422    JAG00940.1    JAG00941.1    JAG61399.1    GDIQ01152372    JAK99353.1    GDIQ01155179    JAK96546.1    GDHC01006716    JAQ11913.1    LRGB01002121    KZS09099.1    QCYY01000901    ROT81962.1    GDIQ01132496    JAL19230.1    GDIQ01094890    JAL56836.1    GDIQ01267665    JAJ84059.1    GDIP01196341    JAJ27061.1    GDIP01244206    JAI79195.1    GDIQ01066013    JAN28724.1    GDIP01065113    JAM38602.1    GDIQ01023511    JAN71226.1    GGMR01011992    MBY24611.1    GDIQ01229553    JAK22172.1    GFXV01006607    MBW18412.1    GDIP01157506    JAJ65896.1    IAAA01013803    LAA04583.1    GEDC01000938    JAS36360.1    GDIP01157505    JAJ65897.1    GDIQ01191751    JAK59974.1    GDIP01163654    JAJ59748.1    KQ414666    KOC65044.1    ACPB03022414    GAHY01001871    JAA75639.1    GEBQ01026054    JAT13923.1    GDIP01059056    JAM44659.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000037510    UP000053268    UP000007151    + More
UP000002320    UP000076408    UP000027135    UP000000311    UP000075884    UP000075886    UP000078541    UP000075920    UP000036403    UP000078492    UP000235965    UP000075880    UP000075809    UP000075901    UP000030765    UP000075902    UP000019118    UP000030742    UP000075881    UP000053097    UP000279307    UP000007062    UP000192223    UP000075883    UP000076407    UP000092461    UP000075903    UP000076502    UP000075900    UP000075840    UP000078540    UP000069272    UP000005205    UP000008237    UP000078542    UP000075885    UP000000673    UP000007755    UP000008820    UP000215335    UP000002358    UP000000305    UP000007819    UP000242457    UP000007266    UP000076858    UP000283509    UP000053825    UP000015103    UP000005203   

PRIDE

H9IUJ2   

Pfam

PF10037   MRP-S27        + More
PF17832   Pre-PUA
PF01472   PUA
PF01253   SUI1
PF00832   Ribosomal_L39
PF02747   PCNA_C
PF00705   PCNA_N

Interpro

IPR019266   MRPS27        + More
IPR034913   MRPS27/PTCD2       
IPR004521   Uncharacterised_CHP00451       
IPR002478   PUA       
IPR036974   PUA_sf       
IPR015947   PUA-like_sf       
IPR039759   eIF2D_SUI1       
IPR036877   SUI1_dom_sf       
IPR041366   Pre-PUA       
IPR036885   SWIB_MDM2_dom_sf       
IPR039757   EIF2D       
IPR001950   SUI1       
IPR023626   Ribosomal_L39e_dom_sf       
IPR000077   Ribosomal_L39       
IPR011990   TPR-like_helical_dom_sf       
IPR022648   Pr_cel_nuc_antig_N       
IPR000730   Pr_cel_nuc_antig       
IPR022649   Pr_cel_nuc_antig_C       

SUPFAM

SSF47592   SSF47592        + More
SSF88697   SSF88697       
SSF55159   SSF55159       
SSF48662   SSF48662       

Gene 3D

2.30.130.10     1.10.1620.10     1.25.40.10    

CDD

cd11608  eIF2D_C

ProteinModelPortal

H9IUJ2   A0A1E1WSS1   A0A2H1VLP6   A0A2A4JE51   A0A194RHT2   A0A0L7LK56   + More
A0A194PE07   A0A212EMG2   A0A336LVR3   B0WTU4   A0A1Y1NAY2   A0A182YL71   A0A067QW81   E2A4F7   A0A182N3H0   E9INF2   A0A182QEA1   A0A195FB75   A0A340TBI8   A0A0J7KWP3   A0A0K8TND0   A0A151IR69   A0A2J7Q5A6   A0A182IWY0   A0A151XIY3   A0A182T0C4   A0A084WHR6   A0A182UKU2   N6TU41   A0A182JXY5   A0A026W027   A0A023ERI1   A0A1Q3F805   J3JWX2   Q7PZ97   A0A1W4XL26   A0A182LZ34   A0A182X6U9   A0A1L8E094   A0A1B0CUT6   A0A182UMQ4   A0A154P7V0   A0A182RVB2   A0A182HHA4   A0A195BT54   A0A2M4BNC2   A0A182FVD7   A0A158NF69   E2BUK8   A0A151IMT9   A0A182PQX4   W5JFP6   A0A2M4AMH1   A0A2M4AN83   F4WVU0   A0A2M4AMM5   Q16VX0   A0A232F402   A0A310SST8   A0A1S4FM73   K7JAS7   E9GES7   J9K5K6   A0A2A3EUE6   D2A267   A0A2S2QVE7   A0A2P6KFH8   A0A0P5B2I3   A0A0A9W0J9   A0A0P5MWT0   A0A0N8BQD5   A0A146LW95   A0A164RZR3   A0A3R7PZE4   A0A0P5QMY5   A0A0P5RZP6   A0A0P5ETG5   A0A0P5APG6   A0A0P4XHN6   A0A0P6EBB0   A0A0P5Y206   A0A0P6H9P3   A0A2S2P537   A0A0P5HCT1   A0A2H8TY09   A0A0P5DEQ8   A0A2L2Y8X2   A0A1B6EEN2   A0A0N8ADQ4   A0A0P5LNL1   A0A0P5D2L8   A0A0L7R2I0   R4G398   A0A087ZNP5   A0A1B6KR60   A0A0P5YDY0  

PDB

6GAW     E-value=6.19788e-06,     Score=118

KEGG

101745964    K17406 small subunit ribosomal protein S27 | (RefSeq) uncharacterized LOC101745964

GO

GO:0005840   GO:0005739   GO:0003743   GO:0001731   GO:0006412   GO:0003735  

PANTHER

PTHR21393   PTHR12217  

Length:

338

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00242

Exp number, first 60 AAs:

0.00212

Total prob of N-in:

0.02010

outside

1  -  338

 

 

Pi

64.63736

Theta

130.998341

Tajima's D

-0.602188

CLR

0.006042

CSRT

0.219639018049098

Interpretation

Uncertain