Gene

KWMTBOMO07806

Pre Gene Modal

BGIBMGA001226

Annotation

PREDICTED:_solute_carrier_family_22_member_3-like_[Bombyx_mori]

Location

Bomo_Chr13(-):7198261-7200042      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.936

CDS

ATGTGTACTCATCAGAGTGATGGTGATATTAACGTTGTCTTTGACAGTGTTTTGAACCAGGAAGTGGGACAATTCGGAAAGTTTCAAGTGCTCAACTTGGCGCTCTTAGCTCTGCCTGCTATTTTTTGCGCGTTCATGGCTGGGGACTACGTATTCACTGCAGGCCGCTTGCCTTATCGCTGTCACGTCCCGCAATGCGATGGAGCATATCCGGAATATGCCCCAGATTGGATATTCAACGCGATCCCAAACAATAACAATGGATTTGATAGCTGCAATCGCTATGCAAACTCAACTGATAACGTTGGTGTTGATTTGTCTCCTAATGCTGAAGACGTCTGCCCTGTTTATTTGTTTGACAGAAGCACGATTATACCTTGCGATAACTACGTACACGAGCGGACAAATACCGTTGTCTATGATTTTCATTTGGAATGTAAAGAGTGGCTAAGGACATTACCCGGTACCTTAAATAGTTTGGGAGGAATGATCGCTTTGATATTAGCAGGATTCGTCTCGGATCGCTTCGGACGAAGAATGTCTATTGTTATTTTCTCCTTTAATATAGCCTTGGTCGGCTTGGTGAGGTCGTTCTCGATAAATTATGCCATGTATGTCACTTTACAGTTTTTGCAGACTGCTATCGGCGGAGGAGCATACAGCGCTGCGTATATTTTGGCAGCAGAGATTGTCGGTACTGAGCACCGTGTCAAAACCAGTGCTACAATGTCAAGTATGTTTGCTACTGGTCAAGTAATATTAGGGCTCCTTGCCTGGGCTTTCCCCGAGTGGCGTACACTCAGTCTGGTGCTCTACATCCCGGTCTTCATTATACTCTCTTACCACTGGATACTCTCAGAGAGTCATCGTTGGCTTTTATCGAAAAACGAACAAGATAAAGCAAAGGCTGCCTTAATACGAGCAGCTGGATTAAATGGAAAGCAAATCTCTGGAAAATCGATGAAATATCTCCTCACCGCCATACCACGACAAATGGAAACTAATAAAGATACGCACAAAAATAATCTGTTCCTTCGCGTTATCAAATCACCCGTTATGTTACGTAGATGTTGTACAACGCCTTTTTTGTGGATTACCACTGTTTTAATATATTACGGTTTATCTATAAATTCCGTGAATTTATCTGGCAATATGTATGTCAATTATATAGCAACAGCCGCTGTCGAAATTCCCGGATATGTGATTGCTGTTATGGTCTTAGATAGGGTTGGCAGAAGAATAACATTGTTCGCAGGTTTTACAATCTGCGCTGTGTGCAACGCTGCTTTCGCTTTTACCCCTATAAACGTGTATCACGTTTCGCTGGGTTTATTTTTAACAGGAAAATTTTGCATAGGCTTAGTGATGACCTCGTTGTATTTGTACACTGCGGAATTGTATCCGACGAGATATCGACATTCGTTCTTAGGATTCTCGTCAATGATAGGACGAATAGGTTCAATCGTGGCACCGTTGACGCCTCCACTCATGGCCTATTGGGTTGGGATACCGTCAATGATGTTTGCTGTGATGGCTTTTGTATCTGGTTTATTGGTACTTACACAACCCGAAACTCGAGGCTTAAAAGTGCCAGACACATTTGAAGACGCTGAAAATATAGGTAAAAATAATACGTCAATTTATCAATGA

Protein

MCTHQSDGDINVVFDSVLNQEVGQFGKFQVLNLALLALPAIFCAFMAGDYVFTAGRLPYRCHVPQCDGAYPEYAPDWIFNAIPNNNNGFDSCNRYANSTDNVGVDLSPNAEDVCPVYLFDRSTIIPCDNYVHERTNTVVYDFHLECKEWLRTLPGTLNSLGGMIALILAGFVSDRFGRRMSIVIFSFNIALVGLVRSFSINYAMYVTLQFLQTAIGGGAYSAAYILAAEIVGTEHRVKTSATMSSMFATGQVILGLLAWAFPEWRTLSLVLYIPVFIILSYHWILSESHRWLLSKNEQDKAKAALIRAAGLNGKQISGKSMKYLLTAIPRQMETNKDTHKNNLFLRVIKSPVMLRRCCTTPFLWITTVLIYYGLSINSVNLSGNMYVNYIATAAVEIPGYVIAVMVLDRVGRRITLFAGFTICAVCNAAFAFTPINVYHVSLGLFLTGKFCIGLVMTSLYLYTAELYPTRYRHSFLGFSSMIGRIGSIVAPLTPPLMAYWVGIPSMMFAVMAFVSGLLVLTQPETRGLKVPDTFEDAENIGKNNTSIYQ

Uniprot

A0A0L7KWH4   A0A2A4J6J0   A0A194RGD2   A0A194PJI6   A0A212EMB5   A0A3S2TCP3   + More
H9JI54   A0A2H1V9D8   A0A212EJ24   A0A2A4K5Q2   A0A212F123   A0A194PRI3   A0A194RF43   H9JI53   A0A2W1BRL6   A0A2W1BMH3   A0A0L7KV39   A0A2A4K5Q3   A0A3S2L9U7   A0A0L7KTQ3   A0A3S2NQS4   A0A212F124   A0A194PR44   A0A194RE10   A0A194PT27   A0A2A4K663   A0A2H1VCJ6   A0A0L7K3V5   A0A194PSH3   A0A2W1BSR9   A0A2H1VQB3   A0A2W1BHB5   A0A2A4JIA3   A0A2H1VQC6   A0A2A4JH68   A0A194RJF2   A0A2A4K6L7   A0A194RF38   A0A2H1VAT9   A0A3S2LQC2   A0A2W1BLR2   A0A0L7K4R7   A0A2H1VSF4   A0A2W1BMV0   H9JI48   A0A0L7KVH9   A0A0L7KTW1   A0A212F137   A0A0L7KZ57   A0A3S2NA23   H9JI52   A0A067RSY2   A0A2H1V9B3   B0XDE9   B0XDF1   A0A212EJ20   A0A194PSH8   A0A2J7RPZ7   A0A2H1VFS1   A0A3S2M6B8   A0A0L7KUG4   A0A2J7RPY7   A0A2J7RPY0   A0A3S2NIQ2   A0A1B6D578   A0A182KSD5   A0A3S2L3J0   Q9VNW8   Q7Q0C3   B0XDF0   A0A182SYI8   B4IUN3   A0A2H1VA76   A0A182LZQ5   B3NJ17   A0A0L0CC92   A0A2A4K6M9   Q16WK7   A0A182GYP2   A0A182Y1J3   A0A2A4JC88   A0A212FPC5   A0A0J9URD0   B4J0Q6   A0A2A4K7E3   B4IAX7   A0A1I8MQZ5   A0A2W1BRJ1   A0A182QUL1   A0A194QC91   A0A084WCB2   A0A212F848   H9IVN2   A0A182WZR9   A0A2J7RPY4   A0A212F2Q3   A0A2A4K5R4   B4QKP9  

Pubmed

26227816    26354079    22118469    19121390    28756777    24845553    + More
20966253    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    12364791    14747013    17210077    17994087    17550304    26108605    17510324    26483478    25244985    22936249    25315136    24438588   

EMBL

JTDY01005018    KOB67470.1    NWSH01002815    PCG67489.1    KQ460205    KPJ16878.1    + More
KQ459606    KPI91250.1    AGBW02013857    OWR42632.1    RSAL01000360    RVE42200.1    BABH01041118    BABH01041119    ODYU01001366    SOQ37439.1    AGBW02014542    OWR41479.1    NWSH01000100    PCG79557.1    AGBW02010973    OWR47448.1    KQ459595    KPI95922.1    KQ460313    KPJ16069.1    BABH01041117    KZ149964    PZC76255.1    PZC76259.1    JTDY01005496    KOB66936.1    PCG79561.1    RVE42203.1    JTDY01005909    KOB66490.1    RVE42198.1    OWR47449.1    KPI95921.1    KPJ16068.1    KPI95919.1    PCG79559.1    ODYU01001566    SOQ37954.1    JTDY01011376    KOB56709.1    KPI95918.1    PZC76257.1    ODYU01003788    SOQ42987.1    KZ150061    PZC74228.1    NWSH01001466    PCG71160.1    SOQ42986.1    PCG71159.1    KPJ16066.1    PCG79558.1    KPJ16064.1    SOQ37955.1    RVE42202.1    PZC74227.1    JTDY01010709    KOB58080.1    ODYU01004183    SOQ43775.1    PZC76258.1    BABH01041122    JTDY01005309    KOB67130.1    KOB66489.1    OWR47450.1    JTDY01004270    KOB68356.1    RVE42197.1    BABH01041114    KK852482    KDR22929.1    SOQ37440.1    DS232756    EDS45427.1    EDS45429.1    OWR41475.1    KPI95923.1    NEVH01001354    PNF42898.1    ODYU01002328    SOQ39679.1    RSAL01000027    RVE51971.1    KOB66937.1    PNF42889.1    PNF42891.1    RSAL01000974    RVE41008.1    GEDC01016480    GEDC01008507    JAS20818.1    JAS28791.1    RSAL01000186    RVE44802.1    AE014296    BT150232    AAF51797.3    AGU12793.1    AAAB01008986    EAA00192.3    EDS45428.1    CM000159    CH891970    EDW95499.1    EDX00097.1    ODYU01001220    SOQ37134.1    AXCM01003135    CH954178    EDV52734.1    JRES01000704    KNC29064.1    PCG79564.1    CH477563    EAT38951.1    JXUM01021216    KQ560594    KXJ81736.1    NWSH01002161    PCG69013.1    AGBW02003000    OWR55596.1    CM002912    KMZ01136.1    CH916366    EDV97911.1    PCG79570.1    CH480826    EDW44440.1    PZC76264.1    AXCN02001021    KQ459193    KPJ03082.1    ATLV01022651    KE525335    KFB47856.1    AGBW02009797    OWR49901.1    BABH01039623    PNF42897.1    AGBW02010692    OWR48028.1    PCG79571.1    CM000363    EDX11464.1   

Proteomes

UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    UP000283053    + More
UP000005204    UP000027135    UP000002320    UP000235965    UP000075882    UP000000803    UP000007062    UP000075901    UP000002282    UP000075883    UP000008711    UP000037069    UP000008820    UP000069940    UP000249989    UP000076408    UP000001070    UP000001292    UP000095301    UP000075886    UP000030765    UP000076407    UP000000304   

PRIDE

H9JI54    H9JI53    H9JI48    H9JI52    Q9VNW8    H9IVN2    + More

Pfam

PF00083   Sugar_tr        + More
PF07690   MFS_1

Interpro

IPR005828   MFS_sugar_transport-like        + More
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR020846   MFS_dom       
IPR011701   MFS       
IPR036769   Ribosomal_L11_C_sf       
IPR020785   Ribosomal_L11_CS       

SUPFAM

SSF103473   SSF103473       

Gene 3D

1.10.10.250    

CDD

cd06174  MFS

ProteinModelPortal

A0A0L7KWH4   A0A2A4J6J0   A0A194RGD2   A0A194PJI6   A0A212EMB5   A0A3S2TCP3   + More
H9JI54   A0A2H1V9D8   A0A212EJ24   A0A2A4K5Q2   A0A212F123   A0A194PRI3   A0A194RF43   H9JI53   A0A2W1BRL6   A0A2W1BMH3   A0A0L7KV39   A0A2A4K5Q3   A0A3S2L9U7   A0A0L7KTQ3   A0A3S2NQS4   A0A212F124   A0A194PR44   A0A194RE10   A0A194PT27   A0A2A4K663   A0A2H1VCJ6   A0A0L7K3V5   A0A194PSH3   A0A2W1BSR9   A0A2H1VQB3   A0A2W1BHB5   A0A2A4JIA3   A0A2H1VQC6   A0A2A4JH68   A0A194RJF2   A0A2A4K6L7   A0A194RF38   A0A2H1VAT9   A0A3S2LQC2   A0A2W1BLR2   A0A0L7K4R7   A0A2H1VSF4   A0A2W1BMV0   H9JI48   A0A0L7KVH9   A0A0L7KTW1   A0A212F137   A0A0L7KZ57   A0A3S2NA23   H9JI52   A0A067RSY2   A0A2H1V9B3   B0XDE9   B0XDF1   A0A212EJ20   A0A194PSH8   A0A2J7RPZ7   A0A2H1VFS1   A0A3S2M6B8   A0A0L7KUG4   A0A2J7RPY7   A0A2J7RPY0   A0A3S2NIQ2   A0A1B6D578   A0A182KSD5   A0A3S2L3J0   Q9VNW8   Q7Q0C3   B0XDF0   A0A182SYI8   B4IUN3   A0A2H1VA76   A0A182LZQ5   B3NJ17   A0A0L0CC92   A0A2A4K6M9   Q16WK7   A0A182GYP2   A0A182Y1J3   A0A2A4JC88   A0A212FPC5   A0A0J9URD0   B4J0Q6   A0A2A4K7E3   B4IAX7   A0A1I8MQZ5   A0A2W1BRJ1   A0A182QUL1   A0A194QC91   A0A084WCB2   A0A212F848   H9IVN2   A0A182WZR9   A0A2J7RPY4   A0A212F2Q3   A0A2A4K5R4   B4QKP9  

PDB

4LDS     E-value=1.43495e-09,     Score=152

KEGG

105841911    K08200 MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 3

GO

GO:0016021   GO:0022857   GO:0005215   GO:0055085   GO:0006412   GO:0005840   GO:0003735   GO:0009081   GO:0004817   GO:0006423   GO:0022891   GO:0003707   GO:0051537  

Length:

549

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

256.13892

Exp number, first 60 AAs:

22.13683

Total prob of N-in:

0.90915

POSSIBLE N-term signal

sequence

inside

1  -  29

TMhelix

30  -  52

outside

53  -  149

TMhelix

150  -  172

inside

173  -  183

TMhelix

184  -  206

outside

207  -  209

TMhelix

210  -  232

inside

233  -  238

TMhelix

239  -  261

outside

262  -  265

TMhelix

266  -  285

inside

286  -  361

TMhelix

362  -  381

outside

382  -  384

TMhelix

385  -  407

inside

408  -  413

TMhelix

414  -  436

outside

437  -  439

TMhelix

440  -  462

inside

463  -  474

TMhelix

475  -  494

outside

495  -  497

TMhelix

498  -  520

inside

521  -  549

 

 

Pi

134.67308

Theta

175.076745

Tajima's D

-0.829652

CLR

61.145622

CSRT

0.168091595420229

Interpretation

Uncertain