Gene

KWMTBOMO07803

Pre Gene Modal

BGIBMGA001230

Annotation

PREDICTED:_otopetrin-2-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):7069065-7091945      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.905

CDS

ATGAGTCCGGCCAATCGCAGCCCACTGTGCGAGGCGAACGAATCTCATCCCGGCGTCACGATAACAGACATGGACACGGTGCATGAAGAAAACGATAATGACAGTGATGAATCGTCGTACTCAGATCTAGGTCGGCTCCGAGAGCGTACTAAAGCGATGCTCGGAACCCCTGCAGATCCGCTGATCCAGCATTCACACTCGCAGCCAAACAGCAGGAGAATGTCCTCGGATATCGAAACTAAACAGCTAGCAGCCAATCTCAATACAAGACGTCCATCCGCAATTATAGCAGCTTTCCGACGACCATCGCAAGCATTAGCGCTATGTGCTGCCACACAACGTCGCTTCCTATCTGAATTGACACCGCATTCGAGGGCATCCATGGCATCTACAATACATGAGACAGCACCATCGGCTGCGGAGATTTTAGGGCATGAAGCTTTAAGCAAAGCGTTGTCCGCTTTGTATGCAAAGTTGCTCGTTGTGTTGGGCTTAGCTTTTCCAGTCACTGAAGTGATAGCTAAGGGCGTGCCAGACGGATATTATCAGGGATTTTATTTGTACCTGTATTCAGTATCAGTTCTATTTGTCGTTTTTCAATACGCAAATATAATGCGACAGAAGGCGGTGACTATGATCATAAGTAACTACGGTCCAGATGGCGAAAAAGAAGACAAAGGTAGAACAACTCCAGCAGAAAAATTAAAAATAAAAGAAACTATCTCTCGATACGGAAGCTTTTATTTGAGACTTGGTGCTATCGCATTCGGTATAGGTTCGATGGTGTACAGTGGCTTAGAATTTGGGGAATATTTCGAGATGACAGACCAATGCCGTTCAATACTGGCAGTCATTACGCCAGCCCTAAGAATGACTTTAACTTTAGCACAAATGCAATTTATATTCCTCACGAACAAAGACATAGAGTTGGGAAGCCACAAGATGATCCAAAGATTCGGTTTCATGCACATGTTGGCAACTAATCTATGCGAATGGCTATACGTGCTAGTTGAGGAAACTAAACATGAAATACATCATTTGGAGCACGCCATGCTGTCTCCAGAAAATACTACTCATAACGTTACGGAAGAGATATCCTGTCGAAGATCAAATATAATGGGTGCTCTATTACAACGTGCCTCACCATTTCTCTTTCCTTGTACGATAGAATATTCACTTATCTGTGCGGTCATTTTTTATGAAATGTGGAAAGAGATAAAATGTACACCGGAGGATTTTGAAAAAAAATTCCACGTCCCCAAAAATAAATCACGAAACAACTCCGTTACGCCGGAGAAAATTTTGCAGCAGTTTGCTGGTATGCTTGGTGTGAGCTCTCCACACGGCAGTCGCACCGCCCTACATCACTTCTCTGTGGATTGTTCGCACGCACACCGCGGACTCTCCGCTGGTGTTCTCATCATCGTCCTCACCATTATATCGCTCATCATGTTCTTCGTATTAGCTAACAACCCAGATACTGTAATCGATGCTATATTTGAAGTTAATGTTTGTGAGTTGGTTTTATACACGATGACATTAATAGCTGCCGGTGCCGCATTATTACAAATGCGTGCTCTTCCTTATAAAAGGAAATCTCAAGCTGTATTAGGTCTAGACACATCACTACTGATCTTGGCTCAGACCGGTATGTTCGTGTACTGCATGTTCAGTTTGATCGGATGTCATCATACTATGAACAGCAATAACAGTTCCGGGTATACTGGTTTCTTCTCAGAGTTCTTATCTCTCATACAGACAATACTGCAGTCTTTATTTATCATCGATGCTTGGTGGCGGCGATGCAGCAATTCAGAGCAACGGCGAGCGAAGCCGGGACGACAATTAGTCACATTCTTGCTCGTGGCAAACATGGCGATGTGGACCATCAATACACTAGAAAAGAATAGAGCCGAGTTTCGTCCAGCACATCTGGCTTTCTACGGACCTTGGGCGTGGACAATAATCACGCATGTTTCGATGCCTCTCGCCATTTTCTACCGCTTCCACTCCACTATTTGTCTATTCGAGATATGGAAGAATTGTTTCAAAAACAAACCAATATACTTAAATGTTTAG

Protein

MSPANRSPLCEANESHPGVTITDMDTVHEENDNDSDESSYSDLGRLRERTKAMLGTPADPLIQHSHSQPNSRRMSSDIETKQLAANLNTRRPSAIIAAFRRPSQALALCAATQRRFLSELTPHSRASMASTIHETAPSAAEILGHEALSKALSALYAKLLVVLGLAFPVTEVIAKGVPDGYYQGFYLYLYSVSVLFVVFQYANIMRQKAVTMIISNYGPDGEKEDKGRTTPAEKLKIKETISRYGSFYLRLGAIAFGIGSMVYSGLEFGEYFEMTDQCRSILAVITPALRMTLTLAQMQFIFLTNKDIELGSHKMIQRFGFMHMLATNLCEWLYVLVEETKHEIHHLEHAMLSPENTTHNVTEEISCRRSNIMGALLQRASPFLFPCTIEYSLICAVIFYEMWKEIKCTPEDFEKKFHVPKNKSRNNSVTPEKILQQFAGMLGVSSPHGSRTALHHFSVDCSHAHRGLSAGVLIIVLTIISLIMFFVLANNPDTVIDAIFEVNVCELVLYTMTLIAAGAALLQMRALPYKRKSQAVLGLDTSLLILAQTGMFVYCMFSLIGCHHTMNSNNSSGYTGFFSEFLSLIQTILQSLFIIDAWWRRCSNSEQRRAKPGRQLVTFLLVANMAMWTINTLEKNRAEFRPAHLAFYGPWAWTIITHVSMPLAIFYRFHSTICLFEIWKNCFKNKPIYLNV

Similarity

Belongs to the synaptobrevin family.

Uniprot

A0A2H1VCH1   A0A194RHF9   A0A194PJI1   A0A1E1W187   A0A212EMC9   A0A3S2KYZ8   + More
A0A0L7KTX5   V5G3P9   D2A3K9   N6TQA5   A0A1B0DPH1   A0A1Y1LL30   U4UBC1   A0A1L8D8X6   A0A1L8D8V6   Q0IFL7   A0A1L8D8X9   B0X0Q3   A0A182PKX5   A0A0K8TQR5   A0A1J1HXL1   A0A182MBX3   Q7QEN7   A0A182XES1   A0A182HIN8   A0A182JKA1   W5J828   A0A182FJD8   A0A084VJ21   A0A1B0ETG4   A0A182YCN0   A0A182Q0E2   A0A182RZ31   A0A182U4E0   A0A336LVG2   A0A336KML1   A0A182VVP7   A0A182N028   E0VCH7   B0X0Q2   A0A336M5E8   A0A1B6C2N4   A0A1S4F8C6   Q0IFL6   A0A067R125   A0A182HB61   A0A2P8YTK7   A0A034W8D4   A0A0K8V3B4   A0A3B0JIZ8   A0A1I8NPZ8   A0A0R3P033   A0A2J7R2L2   A0A3B0K850   A0A3B0KF18   A0A146LN45   A0A1I8M6Y2   A0A1I8M6Y3   A0A088AUK5   A0A0K8VFW9   A0A1W4V6L7   A0A1W4UU99   A0A2R7WDC1   A0A3B0JIL3   A0A3B0K9A0   E2BVD7   B4GSF2   A0A1A9WCG6   Q8IQ02   A0A026W3F3   Q29L36   A0A0A1X4K0   V9IDZ6   X2J8I0   A0A0R1DJ26   A0A0Q5W8X6   A0A0L0BY36   A0A1W4UUN8   A0A0A1XQ32   A0A0J9QUY9   F4X8Q0   A0A1B6CS77   A0A0J9QUT9   A0A3B0K2U2   A0A1B0FRD1   A0A154NXD9   A0A232EUU7   A0A0P9A708   B4NEF1   A0A0L7R7U6   H9IVH9   A0A2A4JFV7   X2JD17   Q9VQN3   A0A1A9YQR1   W8BVT8   A0A1B0B143   A0A1A9UZS0  

Pubmed

26354079    22118469    26227816    18362917    19820115    23537049    + More
28004739    17510324    26369729    12364791    20920257    23761445    24438588    25244985    20566863    24845553    26483478    29403074    25348373    15632085    17994087    26823975    25315136    20798317    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24508170    30249741    25830018    17550304    26108605    22936249    21719571    28648823    19121390    24495485   

EMBL

ODYU01001821    SOQ38548.1    KQ460205    KPJ16874.1    KQ459606    KPI91245.1    + More
GDQN01010297    GDQN01004622    JAT80757.1    JAT86432.1    AGBW02013857    OWR42629.1    RSAL01000413    RVE41839.1    JTDY01005896    KOB66504.1    GALX01003816    JAB64650.1    KQ971338    EFA01890.1    APGK01010729    KB738283    ENN82679.1    AJVK01018277    AJVK01018278    GEZM01054482    JAV73621.1    KB632278    ERL91229.1    GFDF01011173    JAV02911.1    GFDF01011191    JAV02893.1    CH477312    EAT43886.1    GFDF01011172    JAV02912.1    DS232243    EDS38295.1    GDAI01001110    JAI16493.1    CVRI01000035    CRK92831.1    AXCM01001720    AAAB01008846    EAA06228.5    APCN01004026    ADMH02001970    ETN60126.1    ATLV01013426    KE524855    KFB37965.1    AJWK01006356    AXCN02001227    UFQT01000222    SSX21944.1    UFQS01000634    UFQT01000634    SSX05607.1    SSX25966.1    DS235053    EEB11083.1    EDS38294.1    UFQS01000368    UFQT01000368    SSX03231.1    SSX23597.1    GEDC01029520    JAS07778.1    EAT43887.1    KK852782    KDR16611.1    JXUM01031748    JXUM01031749    KQ560934    KXJ80286.1    PYGN01000367    PSN47583.1    GAKP01007983    GAKP01007981    JAC50969.1    GDHF01031181    GDHF01019229    GDHF01009047    JAI21133.1    JAI33085.1    JAI43267.1    OUUW01000006    SPP82205.1    CH379061    KRT04640.1    NEVH01007828    PNF35079.1    SPP82209.1    SPP82208.1    GDHC01010417    JAQ08212.1    GDHF01014567    JAI37747.1    KK854651    PTY17646.1    SPP82207.1    SPP82206.1    GL450828    EFN80313.1    CH479189    EDW25311.1    AE014134    BT003187    AAN10385.1    AAO24942.1    KK107453    QOIP01000004    EZA50595.1    RLU24169.1    EAL32988.3    GBXI01008607    JAD05685.1    JR039392    JR039393    AEY58671.1    AEY58672.1    AHN54096.1    CM000157    KRJ97183.1    CH954177    KQS70032.1    JRES01001163    KNC24937.1    GBXI01001230    JAD13062.1    CM002910    KMY87836.1    GL888932    EGI57319.1    GEDC01021123    JAS16175.1    KMY87837.1    SPP82210.1    CCAG010022353    KQ434778    KZC04336.1    NNAY01002084    OXU22132.1    CH902624    KPU74206.1    CH964239    EDW82120.2    KQ414638    KOC66914.1    BABH01001086    NWSH01001609    PCG70709.1    AHN54095.1    AY058246    AAF51132.3    AAL13475.1    GAMC01005517    JAC01039.1    JXJN01006969   

Proteomes

UP000053240    UP000053268    UP000007151    UP000283053    UP000037510    UP000007266    + More
UP000019118    UP000092462    UP000030742    UP000008820    UP000002320    UP000075885    UP000183832    UP000075883    UP000007062    UP000076407    UP000075840    UP000075880    UP000000673    UP000069272    UP000030765    UP000092461    UP000076408    UP000075886    UP000075900    UP000075902    UP000075920    UP000075884    UP000009046    UP000027135    UP000069940    UP000249989    UP000245037    UP000268350    UP000095300    UP000001819    UP000235965    UP000095301    UP000005203    UP000192221    UP000008237    UP000008744    UP000091820    UP000000803    UP000053097    UP000279307    UP000002282    UP000008711    UP000037069    UP000007755    UP000092444    UP000076502    UP000215335    UP000007801    UP000007798    UP000053825    UP000005204    UP000218220    UP000092443    UP000092460    UP000078200   

PRIDE

Q8IQ02    H9IVH9    Q9VQN3   

Pfam

PF03189   Otopetrin        + More
PF00957   Synaptobrevin
PF13774   Longin

Interpro

IPR004878   Otopetrin        + More
IPR010908   Longin_dom       
IPR011012   Longin-like_dom_sf       
IPR001388   Synaptobrevin       

SUPFAM

SSF64356   SSF64356       

ProteinModelPortal

A0A2H1VCH1   A0A194RHF9   A0A194PJI1   A0A1E1W187   A0A212EMC9   A0A3S2KYZ8   + More
A0A0L7KTX5   V5G3P9   D2A3K9   N6TQA5   A0A1B0DPH1   A0A1Y1LL30   U4UBC1   A0A1L8D8X6   A0A1L8D8V6   Q0IFL7   A0A1L8D8X9   B0X0Q3   A0A182PKX5   A0A0K8TQR5   A0A1J1HXL1   A0A182MBX3   Q7QEN7   A0A182XES1   A0A182HIN8   A0A182JKA1   W5J828   A0A182FJD8   A0A084VJ21   A0A1B0ETG4   A0A182YCN0   A0A182Q0E2   A0A182RZ31   A0A182U4E0   A0A336LVG2   A0A336KML1   A0A182VVP7   A0A182N028   E0VCH7   B0X0Q2   A0A336M5E8   A0A1B6C2N4   A0A1S4F8C6   Q0IFL6   A0A067R125   A0A182HB61   A0A2P8YTK7   A0A034W8D4   A0A0K8V3B4   A0A3B0JIZ8   A0A1I8NPZ8   A0A0R3P033   A0A2J7R2L2   A0A3B0K850   A0A3B0KF18   A0A146LN45   A0A1I8M6Y2   A0A1I8M6Y3   A0A088AUK5   A0A0K8VFW9   A0A1W4V6L7   A0A1W4UU99   A0A2R7WDC1   A0A3B0JIL3   A0A3B0K9A0   E2BVD7   B4GSF2   A0A1A9WCG6   Q8IQ02   A0A026W3F3   Q29L36   A0A0A1X4K0   V9IDZ6   X2J8I0   A0A0R1DJ26   A0A0Q5W8X6   A0A0L0BY36   A0A1W4UUN8   A0A0A1XQ32   A0A0J9QUY9   F4X8Q0   A0A1B6CS77   A0A0J9QUT9   A0A3B0K2U2   A0A1B0FRD1   A0A154NXD9   A0A232EUU7   A0A0P9A708   B4NEF1   A0A0L7R7U6   H9IVH9   A0A2A4JFV7   X2JD17   Q9VQN3   A0A1A9YQR1   W8BVT8   A0A1B0B143   A0A1A9UZS0  

PDB

6O84     E-value=4.30958e-10,     Score=157

KEGG

101747212    no KO assigned | (RefSeq) otopetrin-2-like

GO

GO:0016021   GO:0016192  

PANTHER

PTHR21522  

Length:

692

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

230.03817

Exp number, first 60 AAs:

0

Total prob of N-in:

0.95316

inside

1  -  151

TMhelix

152  -  174

outside

175  -  183

TMhelix

184  -  203

inside

204  -  243

TMhelix

244  -  266

outside

267  -  280

TMhelix

281  -  303

inside

304  -  466

TMhelix

467  -  489

outside

490  -  498

TMhelix

499  -  521

inside

522  -  541

TMhelix

542  -  561

outside

562  -  575

TMhelix

576  -  595

inside

596  -  615

TMhelix

616  -  633

outside

634  -  647

TMhelix

648  -  670

inside

671  -  692

 

 

Pi

20.477827

Theta

164.925582

Tajima's D

0.431889

CLR

0.727903

CSRT

0.496675166241688

Interpretation

Uncertain