SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07801  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA000919
Annotation
PREDICTED:_histone-lysine_N-methyltransferase_SUV420H1_[Amyelois_transitella]
Full name
Histone-lysine N-methyltransferase      
Location in the cell
Nuclear   Reliability : 4.654
 

Sequence

CDS
ATGATTTGTGTATCCAGAATGGTTGTTGGATCAGCGTCTTACCCTGGAAGGCAAGTGCTCCACAAGATGCAGCCGATGGGTATGACTCCTCGCGAGCTGTCCGAATACGATGATCTAGCAACGGCTCTAATCGTGGACCCATATCTAGGCATCACGACACACAAGATGAATATCCGCTATAGACCTTTAAAAACAAACAAGGAAGAATTAAAAAACATTATAAAAGAGTTTATTCATACACAGGATTATAATAAAGCTTATTCAAAACTAGCCAATGGTGAATGGATACCTCGACATTTTAGTAAAAATAAACATCAGCAGACCAAGTTTCGAGACCATATTTATCGTTATTTACGAATTTTTGACAAGAAAGCGGGATTTGTTATAGAACCATGCTATAGATATTCATTAGAAGGCAGAGTAGGAGCAAAAATTTCATCAACAAAAAAGTTTTTCAAACATGAAAGAATAGATTTCTTAGTTGGGTGCATAGCAGAAATGACTGAAGAAGAAGAAAAACAATTATTACATCCTGGAAAAAATGACTTCTCAGTTATGTATAGCTGTAGAAAAAATTGTGCTCAGTTATGGCTTGGACCTGCTGCTTATATTAATCATGATTGTAGACCAACATGTACATTTGAAGCTACAGATCGTGGAAAGGCATTTGTTCGAGTGCTGAGAGATATAGAGCCTGGTGAAGAAATTACTTGTTACTATGGTGAAGATTTTTTTGGAAATAGCAATTGTTACTGTGAATGTGAAACTTGTGAAAGAAGGGGAAAAGGGGCATTTTCAGTTGAAAGTTCACATAATGATGAACAATCCACAAGATATAGATTTCGAGAAACAGATAACAGAATAAACAGAACAAAAGCAAAGCAGGTTCAAAAATCATCAAATGTAAAAAATTCTGATAAGACTCGAATATCCAGTAGGCAAAATTCTAGTATAGTATCTCCTCTTAGTATGAAAGAAATGAAACAAAAAGGCTTAACAAAGTATGATGCAGAATTATTGATAGCTCAGGGTTGCATAGCTGATGTTTTAGATGGCACTACTGATAAAGAAGACAAAGGGAGCAGAGAATCCTCCACATCTAGTAGGGGTGAAAGGTTACGAAAAAGGACAGATAGTAACAAAACTATTAATGGTGTACATGGCACAGGAAAACGCAGAGCACCTCCTTCTCGTTGTTGTAGCACTGCCAGTTCCCGAAGCAGTAGAGATTCTCATTCAGGAATTGTGCTAAGAAGTCATAAACGCCTTCTTGATACGTGCATTCAACCCAGTTTCCCTAAGATAAAAAATGGATCAAAAGTAGGTTCAGACATAAAATATGAAAGAAATGTGAATACACCAAAAGAAGAGGCTGATTTACCTAGCACTTTAGAAATTTCCAATTTTGACATTAAACCCGACCTACCTATTGTAAATGATAATGAACACAGTTCAGATTTGAATTCTTTTGTGTATACTGATACCCATTTAGGTGGTAAGAATTGTGATAAAAAAGAATCTCTAACTGAAACAGACCTGCCTATAGCTACAGCGACAGAGGATAAAATAGAAATTATAGAAAGTAAATCAAAGGTTCAAAAAGAACCTGATGAAATTGATTGTACGGTGAGAAATGAAAATTCGTCTTTAAAGAGTGGAATTGATTTTAGGGAAAATGTAAATCCAAGTGAGCCTAACAATAGTAAAAACAATAAGGTTCAAAAAATAGAAATAAGCAATAGAAGTGATGAGTCAAAAAGAGAAGTTGATTCTGGACCTCCTTGGTTAGTGGATAATTCTAATAAAAGCAGTGATTGCCCTTGTACTCCACCAAGGCGTGGATTGAAGTTGACATTACGTGTAAAACGAAGTCCTGTTGTTGAAGAGGTAATGGATTGTGGAGCACCTGCTGAAGCACCAGAGTATGAAGTTTTACGATTAGAAGGTGTCGATCCCGAAACTGCTAGACGCTTGAAGAAACGACGTCGATCCAAGGAACGACATCGAAAACATAGTCCTGTCCGTCCTCTGCCTCCAATGAAACGCCTAAGATTAATTTTTGGCAACGAAAGTCGCACTATCGATTTGCCTACAGCTTTATCAGCAGACTGA
Protein
MICVSRMVVGSASYPGRQVLHKMQPMGMTPRELSEYDDLATALIVDPYLGITTHKMNIRYRPLKTNKEELKNIIKEFIHTQDYNKAYSKLANGEWIPRHFSKNKHQQTKFRDHIYRYLRIFDKKAGFVIEPCYRYSLEGRVGAKISSTKKFFKHERIDFLVGCIAEMTEEEEKQLLHPGKNDFSVMYSCRKNCAQLWLGPAAYINHDCRPTCTFEATDRGKAFVRVLRDIEPGEEITCYYGEDFFGNSNCYCECETCERRGKGAFSVESSHNDEQSTRYRFRETDNRINRTKAKQVQKSSNVKNSDKTRISSRQNSSIVSPLSMKEMKQKGLTKYDAELLIAQGCIADVLDGTTDKEDKGSRESSTSSRGERLRKRTDSNKTINGVHGTGKRRAPPSRCCSTASSRSSRDSHSGIVLRSHKRLLDTCIQPSFPKIKNGSKVGSDIKYERNVNTPKEEADLPSTLEISNFDIKPDLPIVNDNEHSSDLNSFVYTDTHLGGKNCDKKESLTETDLPIATATEDKIEIIESKSKVQKEPDEIDCTVRNENSSLKSGIDFRENVNPSEPNNSKNNKVQKIEISNRSDESKREVDSGPPWLVDNSNKSSDCPCTPPRRGLKLTLRVKRSPVVEEVMDCGAPAEAPEYEVLRLEGVDPETARRLKKRRRSKERHRKHSPVRPLPPMKRLRLIFGNESRTIDLPTALSAD

Summary

Catalytic Activity
L-lysyl-[histone] + S-adenosyl-L-methionine = H(+) + N(6)-methyl-L-lysyl-[histone] + S-adenosyl-L-homocysteine
Similarity
Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar4-20 subfamily.
EC Number
2.1.1.43
Pfam
PF00856   SET
Interpro
IPR041938   Hist-Lys_N-MTase_N        + More
IPR025790   Hist-Lys_N-MTase_Suvar4-20       
IPR001214   SET_dom       
IPR039977   KMT5B/KMT5C/SET9       
Gene 3D
PDB
4BUP     E-value=3.16411e-76,     Score=728

Ontologies

Topology

Length:
703
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00528
Exp number, first 60 AAs:
0.00528
Total prob of N-in:
0.00049
outside
1  -  703
 
 

Population Genetic Test Statistics

Pi
244.626086
Theta
203.879036
Tajima's D
0.304947
CLR
52.763772
CSRT
0.458227088645568
Interpretation
Uncertain
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