Gene

KWMTBOMO07800

Pre Gene Modal

BGIBMGA001233

Annotation

PREDICTED:_mitochondrial_ornithine_transporter_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr13(-):7034003-7038815      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.128

CDS

ATGGCAGATTCTACAGATTCTTCAAATAATTTAAGGAGTGGAATCATTGATTTTACAGCAGGGTCTTTAGGTGGTGTGGCAGTTGTTTATGTTGGTCAACCATTGGACACAGTTAAAGTGAAAATGCAAACCTTTCCACATTTATATAAAGGAATGTATGACTGTTTAAAACAAACATTAAGAAATGATGGTGTAATAAGAGGTTTATATGCTGGCACCACACCAGCTATTATGGCAAATGTAGCAGAAAACTCTGTGCTTTTTGCAGCCTATGGATATTGCCAAAAGTTTGTCTGTCGAATTACAGGAGTAGAAAGTGTAGAGCAGCTCTCAGCGGTGGGTAATGCATCAGCAGGTTTCTTGGCTGCATTCTTCTCCTCGTTCACACTATGTCCAACGGAACTAATAAAGTGTCAACTACAAGCCATGCGTGAAGTCAACATTCAGGGTTCACAAACTGCTGTTAAAGTGACGCCATTACAATTAACACAGCAAATATTCAAGCAATATGGCATACAGGGTCTTTTTAGAGGCCTTGTTCCAACAATTATGAGGGAAATGCCTGGATATTTCTTTTTCTTTGGTGGATATGAAGGAACGAGAGAATTGTTGGCTAAACCTGGACAATCAAAAGACGATATAGGGTTTTTGAGGACAATGGCCGCGGGAGCAGTTGGTGGTCTTGTATTGTGGACGGTTATATTTCCAACAGATGTCATTAAATCTAGAGTACAAATATCTAATAAAAGTCAAAAGTTCCTAACGGTTGGATATGAGATCGTTAAAAAAGAGGGTGTTCTAGCATTGTATAATGGACTAAAACCGACGCTAGTCCGTACCATTCCGGCCACGGCTGCCTTATTCGTTGTCTATGAATATTCCAAGAAGTTTATGCATAAATCCTTTGGAGATTAG

Protein

MADSTDSSNNLRSGIIDFTAGSLGGVAVVYVGQPLDTVKVKMQTFPHLYKGMYDCLKQTLRNDGVIRGLYAGTTPAIMANVAENSVLFAAYGYCQKFVCRITGVESVEQLSAVGNASAGFLAAFFSSFTLCPTELIKCQLQAMREVNIQGSQTAVKVTPLQLTQQIFKQYGIQGLFRGLVPTIMREMPGYFFFFGGYEGTRELLAKPGQSKDDIGFLRTMAAGAVGGLVLWTVIFPTDVIKSRVQISNKSQKFLTVGYEIVKKEGVLALYNGLKPTLVRTIPATAALFVVYEYSKKFMHKSFGD

Similarity

Belongs to the mitochondrial carrier (TC 2.A.29) family.

Uniprot

H9IVF3   A0A2H1VDQ8   A0A2A4JS12   A0A3S2N9K7   A0A212EMA7   A0A194PJH6   + More
A0A1E1W105   K7IZH4   A0A232FCA3   A0A154PIS4   A0A1J1HI04   A0A182H243   A0A026WCJ4   A0A1B0D2W6   E2BJ07   A0A1L8E011   A0A0L7QKW2   A0A1Q3FWU4   A0A1B0AE96   Q16ZQ7   A0A0C9QPC0   A0A336M1K4   A0A194RHR7   D3TQ12   U5EMU4   A0A088AV17   A0A0N0BD72   A0A2A3ESV9   A0A1W4X4Z2   A0A182PBI9   A0A151WXW9   A0A182KFJ4   A0A034VBR6   A0A182SBE0   A0A1B6GG02   A0A2M3Z8N9   W8C6I6   A0A1B6MNB3   A0A2M3ZI67   A0A182Q741   A0A0K8VNZ3   A0A158P1J2   A0A195D380   A0A182J5P1   A0A182RMX5   F4WE83   A0A182U2A7   A0A182XDU3   A0A182UWG5   A0A182L6S0   A0A182IAR1   A0A182W5H8   T1HSQ1   A0A0A1WHL3   A0A151J559   A0A151I5C3   A0A195FHJ3   A0A1B6IJU5   A0A0T6AX27   A0A0P4VQW4   E2ART1   A0A084VLR2   A0A1Y1KJ87   A0A2M4AS79   A0A182FJ83   A0A182MFD3   A0A3Q0ITN2   A0A1S4G8U7   A0A1A9ULB7   A0A067R2Z9   A0A1I8PB32   A0A2M4AS42   W5JDM2   D2A299   B4MT67   A0A2M4BUC1   T1PBU5   A0A1L8EFG6   A0A1B0APJ6   B4JKN9   A0A2J7Q120   A0A1B6CQ55   A0A0A9WRK7   B4M1Q7   A0A1W4VJX1   A0A0K8UT73   Q9W2T2   A0A0L0CMP4   A0A0K8T1M0   Q29H38   A0A069DSC1   B4L8T1   B4H0E1   A0A0V0G905   A0A0N8NZT7   Q7KVQ8   B3NW16   B4PXY0   A0A3B0KKY3   X4Z298  

Pubmed

19121390    22118469    26354079    20075255    28648823    26483478    + More
24508170    30249741    20798317    17510324    20353571    25348373    24495485    21347285    21719571    20966253    25830018    27129103    24438588    28004739    12364791    24845553    20920257    23761445    18362917    19820115    17994087    25315136    25401762    26823975    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    26108605    15632085    26334808    17550304   

EMBL

BABH01000993    ODYU01001821    SOQ38542.1    NWSH01000724    PCG74609.1    RSAL01000413    + More
RVE41843.1    AGBW02013857    OWR42624.1    KQ459606    KPI91240.1    GDQN01010377    JAT80677.1    NNAY01000430    OXU28456.1    KQ434926    KZC11722.1    CVRI01000004    CRK87672.1    JXUM01104663    KQ564904    KXJ71598.1    KK107273    QOIP01000012    EZA53792.1    RLU16040.1    AJVK01002889    GL448543    EFN84352.1    GFDF01002087    JAV11997.1    KQ414934    KOC59257.1    GFDL01002965    JAV32080.1    CH477485    EAT40165.1    GBYB01002537    JAG72304.1    UFQS01000423    UFQT01000423    SSX03831.1    SSX24196.1    KQ460205    KPJ16870.1    EZ423514    ADD19790.1    GANO01000866    JAB59005.1    KQ435883    KOX69691.1    KZ288192    PBC34229.1    KQ982656    KYQ52759.1    GAKP01019763    GAKP01019762    GAKP01019760    JAC39190.1    GECZ01019229    GECZ01011555    GECZ01008418    GECZ01005740    JAS50540.1    JAS58214.1    JAS61351.1    JAS64029.1    GGFM01004099    MBW24850.1    GAMC01004222    GAMC01004220    GAMC01004219    JAC02337.1    GEBQ01002596    JAT37381.1    GGFM01007462    MBW28213.1    AXCN02001237    GDHF01011741    JAI40573.1    ADTU01000071    KQ976956    KYN06824.1    GL888102    EGI67521.1    APCN01001308    ACPB03016663    GBXI01016282    JAC98009.1    KQ980071    KYN17854.1    KQ976425    KYM88069.1    KQ981606    KYN39687.1    GECU01020517    JAS87189.1    LJIG01022603    KRT79692.1    GDKW01001704    JAI54891.1    GL442170    EFN63849.1    ATLV01014545    KE524974    KFB38906.1    GEZM01086416    JAV59466.1    GGFK01010271    MBW43592.1    AXCM01000597    AAAB01008846    KK852945    KDR13440.1    GGFK01010270    MBW43591.1    ADMH02001831    ETN60990.1    KQ971338    EFA02052.1    CH963851    EDW75306.1    GGFJ01007535    MBW56676.1    KA646237    AFP60866.1    GFDG01001329    JAV17470.1    JXJN01001457    JXJN01001458    CH916370    EDW00142.1    NEVH01019960    PNF22266.1    GEDC01021679    JAS15619.1    GBHO01033548    GDHC01004215    JAG10056.1    JAQ14414.1    CH940651    EDW65611.1    GDHF01022427    JAI29887.1    AY061222    AE014298    AAL28770.1    AGB95266.1    JRES01000290    KNC32714.1    GBRD01006404    GBRD01006403    GBRD01006402    JAG59418.1    CH379064    EAL31921.2    GBGD01002332    JAC86557.1    CH933815    EDW08056.1    CH479200    EDW29736.1    GECL01001595    JAP04529.1    CH902622    KPU75236.1    AAF46607.2    CH954180    EDV46149.1    CM000162    EDX02952.1    OUUW01000019    SPP89240.1    BT150437    AHV85499.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000002358    + More
UP000215335    UP000076502    UP000183832    UP000069940    UP000249989    UP000053097    UP000279307    UP000092462    UP000008237    UP000053825    UP000092445    UP000008820    UP000053240    UP000005203    UP000053105    UP000242457    UP000192223    UP000075885    UP000075809    UP000075881    UP000075901    UP000075886    UP000005205    UP000078542    UP000075880    UP000075900    UP000007755    UP000075902    UP000076407    UP000075903    UP000075882    UP000075840    UP000075920    UP000015103    UP000078492    UP000078540    UP000078541    UP000000311    UP000030765    UP000069272    UP000075883    UP000079169    UP000078200    UP000027135    UP000095300    UP000000673    UP000007266    UP000007798    UP000095301    UP000092460    UP000001070    UP000235965    UP000008792    UP000192221    UP000000803    UP000037069    UP000001819    UP000009192    UP000008744    UP000007801    UP000008711    UP000002282    UP000268350   

PRIDE

H9IVF3    Q9W2T2    Q7KVQ8    X4Z298   

Pfam

PF00153   Mito_carr

Interpro

IPR018108   Mitochondrial_sb/sol_carrier        + More
IPR023395   Mt_carrier_dom_sf       

SUPFAM

SSF103506   SSF103506       

Gene 3D

1.50.40.10    

ProteinModelPortal

H9IVF3   A0A2H1VDQ8   A0A2A4JS12   A0A3S2N9K7   A0A212EMA7   A0A194PJH6   + More
A0A1E1W105   K7IZH4   A0A232FCA3   A0A154PIS4   A0A1J1HI04   A0A182H243   A0A026WCJ4   A0A1B0D2W6   E2BJ07   A0A1L8E011   A0A0L7QKW2   A0A1Q3FWU4   A0A1B0AE96   Q16ZQ7   A0A0C9QPC0   A0A336M1K4   A0A194RHR7   D3TQ12   U5EMU4   A0A088AV17   A0A0N0BD72   A0A2A3ESV9   A0A1W4X4Z2   A0A182PBI9   A0A151WXW9   A0A182KFJ4   A0A034VBR6   A0A182SBE0   A0A1B6GG02   A0A2M3Z8N9   W8C6I6   A0A1B6MNB3   A0A2M3ZI67   A0A182Q741   A0A0K8VNZ3   A0A158P1J2   A0A195D380   A0A182J5P1   A0A182RMX5   F4WE83   A0A182U2A7   A0A182XDU3   A0A182UWG5   A0A182L6S0   A0A182IAR1   A0A182W5H8   T1HSQ1   A0A0A1WHL3   A0A151J559   A0A151I5C3   A0A195FHJ3   A0A1B6IJU5   A0A0T6AX27   A0A0P4VQW4   E2ART1   A0A084VLR2   A0A1Y1KJ87   A0A2M4AS79   A0A182FJ83   A0A182MFD3   A0A3Q0ITN2   A0A1S4G8U7   A0A1A9ULB7   A0A067R2Z9   A0A1I8PB32   A0A2M4AS42   W5JDM2   D2A299   B4MT67   A0A2M4BUC1   T1PBU5   A0A1L8EFG6   A0A1B0APJ6   B4JKN9   A0A2J7Q120   A0A1B6CQ55   A0A0A9WRK7   B4M1Q7   A0A1W4VJX1   A0A0K8UT73   Q9W2T2   A0A0L0CMP4   A0A0K8T1M0   Q29H38   A0A069DSC1   B4L8T1   B4H0E1   A0A0V0G905   A0A0N8NZT7   Q7KVQ8   B3NW16   B4PXY0   A0A3B0KKY3   X4Z298  

PDB

2LCK     E-value=1.36986e-09,     Score=149

KEGG

101735882    K15101 solute carrier family 25 (mitochondrial ornithine transporter) member 2/15 | (RefSeq) mitocho

GO

GO:0022857   GO:0016021   GO:0000064   GO:1990575   GO:0015171   GO:0005743   GO:0003333  

Length:

304

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

66.38524

Exp number, first 60 AAs:

19.08751

Total prob of N-in:

0.21137

POSSIBLE N-term signal

sequence

outside

1  -  14

TMhelix

15  -  32

inside

33  -  213

TMhelix

214  -  236

outside

237  -  304

 

 

Pi

158.162273

Theta

155.764516

Tajima's D

-0.311958

CLR

0.104904

CSRT

0.286435678216089

Interpretation

Uncertain