Gene

KWMTBOMO07798  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA000918

Annotation

S-phase_kinase-associated_protein_[Bombyx_mori]

Location

Bomo_Chr13(+):7023426-7024095      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.434

CDS

ATGCCAAATATTAAGTTGCAATCATCAGACAACGAGGTCTTCGTTGTTGATGTTGAAATCGCCAAATGCTCCGTAACTATCAAAACTATGCTAGAAGACTTAGGCATGGAAGAGGATGAAGAGGAAGTTGTACCTTTACCTAATGTCAATTCTGCAATACTCAAAAAAGTTATTCAGTGGGCTACTTATCATAAAGACGATCCTCCGCTACCAGAAGATGACGAAAACAAGGAAAAGAGGACTGATGACATATCATCATGGGATGCTGATTTTTTGAAAGTTGACCAAGGCACACTCTTTGAATTAATATTAGCTGCAAATTATTTGGACATCAAGGGTTTATTAGATGTCACATGTAAAACTGTAGCAAACATGATCAAAGGAAAGACTCCTGAAGAAATCCGTAAAACGTTCAACATTAAGAATGATTTCACTGCTGCAGAAGAAGATCAGGTTCGTAAAGAGAATGAATGGTGTGAAGAAAAGTAA

Protein

MPNIKLQSSDNEVFVVDVEIAKCSVTIKTMLEDLGMEEDEEEVVPLPNVNSAILKKVIQWATYHKDDPPLPEDDENKEKRTDDISSWDADFLKVDQGTLFELILAANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTAAEEDQVRKENEWCEEK

Similarity

Belongs to the SKP1 family.

Uniprot

Q1HQ42   A0A0L7KPM7   A0A2A4JT83   S4WXF0   A0A1E1W8I0   A0A212EMA5   + More
S4PA96   I4DJF6   A0A1B6DAW3   A0A023FFR1   A0A1D2NA30   A0A2H8TRC8   C4WRR7   A0A2S2PCF7   A0A154PIR9   C1C2Q8   C1BVG7   C1BPT6   A0A2R5LMY6   A0A293MVM3   T1E352   A0A1Q3F637   B0WSC9   Q0IEP2   A0A2H8TMA2   A0A2S2NFY0   C1BQK4   A0A1B6G4T2   A0A023EHI9   A0A1L8DTB3   A0A1B0DPH3   A0A1B0FUX2   D3PFK5   A0A1I8Q939   T1P858   A0A0L0BPW8   U5EVD1   A0A0K8TP56   A0A336LYQ8   C1BQV9   A0A1L8EHC7   D3TMR7   A0A1A9YQQ8   A0A1A9UDQ8   A0A1B0AL86   A0A293L9R9   C4WWR6   A0A1A9WCG3   A0A1E1XTQ3   A0A067QU85   A0A182F190   A0A0T6AYK5   A0A1L8DST9   A0A2J7Q144   A0A151IY69   F4WI69   A0A195BEG5   A0A195F2K6   E2BWQ3   A0A158NZR5   E2ART4   A0A151WXX8   A0A2M3Z650   A0A2M4ADD5   A0A2M4C1S5   W5J6B0   A0A084VMI1   A0A182J1Z4   A0A2R7WMP2   A0A0A9Y2E6   A0A182VJ26   A0A182TQ87   A0A182X696   Q7Q8A7   A0A182IBB6   A0A1W4WU43   A0A182R406   A0A182NAM6   A0A182K8T2   A0A182P6F2   A0A182VTG6   A0A1Y1LX45   A0A224XYR0   A0A1V9XP73   A0A0P4VKM1   A0A069DNG2   R4G4F5   A0A195D395   A0A0L7R7N1   A0A2A3ESH7   V9IK99   A0A088AV18   A0A1B0AGZ1   A0A1B6KMR4   A0A1B6K0S1   W8B538   A0A034VYK7   A0A0K8ULK2   A0A0A1WJT0   A0A182SI86  

Pubmed

19121390    26227816    24027328    22118469    23622113    22651552    + More
26354079    27289101    24330624    17510324    24945155    26483478    25315136    26108605    26369729    20353571    29209593    24845553    21719571    20798317    21347285    20920257    23761445    24438588    25401762    12364791    14747013    17210077    28004739    28327890    27129103    26334808    24495485    25348373    25830018   

EMBL

BABH01000995    DQ443210    ABF51299.1    JTDY01007626    KOB65065.1    NWSH01000724    + More
PCG74610.1    KC812498    ODYU01001821    AGP04177.1    SOQ38544.1    GDQN01007799    JAT83255.1    AGBW02013857    OWR42622.1    GAIX01003349    JAA89211.1    AK401424    KQ459606    BAM18046.1    KPI91238.1    GEDC01014480    JAS22818.1    GBBK01004061    GBBK01004060    JAC20422.1    LJIJ01000124    ODN02119.1    GFXV01001746    GFXV01004949    MBW13551.1    MBW16754.1    ABLF02022440    AK339885    BAH70587.1    GGMR01014453    MBY27072.1    KQ434926    KZC11725.1    BT081137    ACO15561.1    BT078596    BT121000    HACA01027188    ACO13020.1    ADD37930.1    CDW44549.1    BT076615    BT076767    ACO11039.1    GGLE01006723    MBY10849.1    GFWV01019260    MAA43988.1    GALA01000685    JAA94167.1    GFDL01012014    JAV23031.1    DS232068    EDS33767.1    CH477558    EAT39006.1    EAT39007.1    GFXV01002603    MBW14408.1    GGMR01003461    MBY16080.1    BT076883    ACO11307.1    GECZ01019497    GECZ01012378    JAS50272.1    JAS57391.1    JXUM01119893    GAPW01005242    GAPW01005241    GAPW01005240    KQ566335    JAC08356.1    KXJ70221.1    GFDF01004549    JAV09535.1    AJVK01018281    AJWK01006356    BT120411    ADD24051.1    KA644846    AFP59475.1    JRES01001642    KNC21264.1    GANO01001086    JAB58785.1    GDAI01001441    JAI16162.1    UFQT01000315    SSX23115.1    BT076988    ACO11412.1    GFDG01000744    JAV18055.1    EZ422719    ADD18995.1    JXJN01030394    GFWV01000533    MAA25263.1    ABLF02020651    AK342227    BAH72336.1    GFAA01000750    JAU02685.1    KK852945    KDR13437.1    LJIG01022603    KRT79687.1    GFDF01004548    JAV09536.1    NEVH01019960    PNF22297.1    KQ980791    KYN13124.1    GL888175    EGI66000.1    KQ976511    KYM82582.1    KQ981856    KYN34693.1    GL451165    EFN79876.1    ADTU01004931    GL442170    EFN63852.1    KQ982656    KYQ52742.1    GGFM01003245    MBW23996.1    GGFK01005483    MBW38804.1    GGFJ01010118    MBW59259.1    ADMH02002110    ETN58923.1    ATLV01014596    KE524975    KFB39175.1    AXCP01003310    KK855090    PTY20769.1    GBHO01016392    JAG27212.1    AAAB01008944    EAA10209.2    APCN01000664    GEZM01048052    JAV76645.1    GFTR01002704    JAW13722.1    MNPL01006666    OQR75213.1    GDKW01000959    JAI55636.1    GBGD01003281    JAC85608.1    ACPB03001801    GAHY01000816    JAA76694.1    KQ976956    KYN06839.1    KQ414638    KOC66839.1    KZ288192    PBC34232.1    JR049751    AEY61062.1    GEBQ01027493    JAT12484.1    GECU01002666    JAT05041.1    GAMC01021661    JAB84894.1    GAKP01011795    JAC47157.1    GDHF01024931    GDHF01007557    JAI27383.1    JAI44757.1    GBXI01015366    GBXI01009345    JAC98925.1    JAD04947.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000007151    UP000053268    UP000094527    + More
UP000007819    UP000076502    UP000002320    UP000008820    UP000069940    UP000249989    UP000092462    UP000092461    UP000095300    UP000095301    UP000037069    UP000092443    UP000078200    UP000092460    UP000091820    UP000027135    UP000069272    UP000235965    UP000078492    UP000007755    UP000078540    UP000078541    UP000008237    UP000005205    UP000000311    UP000075809    UP000000673    UP000030765    UP000075880    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000192223    UP000075900    UP000075884    UP000075881    UP000075885    UP000075920    UP000192247    UP000015103    UP000078542    UP000053825    UP000242457    UP000005203    UP000092445    UP000075901   

PRIDE

Q1HQ42    A0A088AV18   

Pfam

PF03931   Skp1_POZ        + More
PF01466   Skp1

Interpro

IPR016897   SKP1        + More
IPR011333   SKP1/BTB/POZ_sf       
IPR036296   SKP1-like_dim_sf       
IPR001232   SKP1-like       
IPR016073   Skp1_comp_POZ       
IPR016072   Skp1_comp_dimer       

SUPFAM

SSF54695   SSF54695        + More
SSF81382   SSF81382       

ProteinModelPortal

Q1HQ42   A0A0L7KPM7   A0A2A4JT83   S4WXF0   A0A1E1W8I0   A0A212EMA5   + More
S4PA96   I4DJF6   A0A1B6DAW3   A0A023FFR1   A0A1D2NA30   A0A2H8TRC8   C4WRR7   A0A2S2PCF7   A0A154PIR9   C1C2Q8   C1BVG7   C1BPT6   A0A2R5LMY6   A0A293MVM3   T1E352   A0A1Q3F637   B0WSC9   Q0IEP2   A0A2H8TMA2   A0A2S2NFY0   C1BQK4   A0A1B6G4T2   A0A023EHI9   A0A1L8DTB3   A0A1B0DPH3   A0A1B0FUX2   D3PFK5   A0A1I8Q939   T1P858   A0A0L0BPW8   U5EVD1   A0A0K8TP56   A0A336LYQ8   C1BQV9   A0A1L8EHC7   D3TMR7   A0A1A9YQQ8   A0A1A9UDQ8   A0A1B0AL86   A0A293L9R9   C4WWR6   A0A1A9WCG3   A0A1E1XTQ3   A0A067QU85   A0A182F190   A0A0T6AYK5   A0A1L8DST9   A0A2J7Q144   A0A151IY69   F4WI69   A0A195BEG5   A0A195F2K6   E2BWQ3   A0A158NZR5   E2ART4   A0A151WXX8   A0A2M3Z650   A0A2M4ADD5   A0A2M4C1S5   W5J6B0   A0A084VMI1   A0A182J1Z4   A0A2R7WMP2   A0A0A9Y2E6   A0A182VJ26   A0A182TQ87   A0A182X696   Q7Q8A7   A0A182IBB6   A0A1W4WU43   A0A182R406   A0A182NAM6   A0A182K8T2   A0A182P6F2   A0A182VTG6   A0A1Y1LX45   A0A224XYR0   A0A1V9XP73   A0A0P4VKM1   A0A069DNG2   R4G4F5   A0A195D395   A0A0L7R7N1   A0A2A3ESH7   V9IK99   A0A088AV18   A0A1B0AGZ1   A0A1B6KMR4   A0A1B6K0S1   W8B538   A0A034VYK7   A0A0K8ULK2   A0A0A1WJT0   A0A182SI86  

PDB

3WSO     E-value=9.49256e-54,     Score=526

KEGG

733106    K03094 S-phase kinase-associated protein 1 | (RefSeq) S-phase kinase-associated protein

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)
04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04310    Wnt signaling pathway - Bombyx mori (domestic silkworm)
04341    Hedgehog signaling pathway - fly - Bombyx mori (domestic silkworm)
04350    TGF-beta signaling pathway - Bombyx mori (domestic silkworm)

GO

GO:0006511   GO:0016301   GO:0016874   GO:0007018   GO:0030286   GO:0009081   GO:0004817   GO:0006423   GO:0016021   GO:0022891   GO:0003707   GO:0051537  

Length:

162

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01066

Exp number, first 60 AAs:

0.00019

Total prob of N-in:

0.11384

outside

1  -  162

 

 

Pi

168.376222

Theta

162.219797

Tajima's D

0.119348

CLR

0

CSRT

0.404379781010949

Interpretation

Uncertain