SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07796
Pre Gene Modal
BGIBMGA001234
Annotation
PREDICTED:_uncharacterized_protein_LOC101736142_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.1 PlasmaMembrane   Reliability : 1.934
 

Sequence

CDS
ATGCAATCACTCCAGGAGATTTTGCAACAGAATGGATGCCTATACGTCTACGAAGTGCTCGACATTGGCTTTTACAGGTGGATTTTGTCCTTGTGTTTTTTGATGTCTCTCACCTACGTCAGCCCTCAACCGGTTCGTTGTCAGGAAGACACGCAGTGCTCCAGTGGTTATTACTGTGAGATAGCATTGAATATTTGCCGAGAATGCATTAACTGCGAAGAATTGAAGCGCGAACCATCAACCCGTTTTCCACCCAATACTTGTATCAAATCTGTAGTCGACTGCGGTACGTGTAAGAAAGGGTTAGTGTTAGACCACGACGCTGATATAAGCGGCGAATGCGTGAGGCCCGACGACCGAGAGGAGAGCGCCGTGTTGCCTCCTTACGTGTGGGCGCTGATCGTCATCGGGCTACTGTTGTTCGTCGTCATCGTATTCTACTTGCTGAGGCACAGGGATATGTTCAAGGTTTTAGCTTCGGCTCGCACTTCAGCGTCGGTGAGATCTCAGTGCTACCGGGTTAACGCCACAGCCCCCGACTTCCCGCCGCCCTACAATCCGGGAACCGACGATCCAGGATCCGGCACCCACGCAGCGTATCCGCCCCTCACCAGCGTTGGACACGACGAAGAGCTATCGCGTCCGTTCATTAAGCCGGCCTGGCCGAACCCGCTTCAGGAACTGCGCGAGTCCGACAACAGACAGTCCTCTACGGTCTTCAATCCGCCGGCCTACGAACAGTCCGAACCGCCTTCCGACACTAATAACGAACAGGCTGACAAAGAGCCCGACCGTATATCGCTGCACGACGAAGACACGGTCGAGAGCCCGTGGACCCCGAACACATCCAGTGCCAACAACAACAACAATAACAACAATACCGTAGTTGCTAAAAGGTGA
Protein
MQSLQEILQQNGCLYVYEVLDIGFYRWILSLCFLMSLTYVSPQPVRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKSVVDCGTCKKGLVLDHDADISGECVRPDDREESAVLPPYVWALIVIGLLLFVVIVFYLLRHRDMFKVLASARTSASVRSQCYRVNATAPDFPPPYNPGTDDPGSGTHAAYPPLTSVGHDEELSRPFIKPAWPNPLQELRESDNRQSSTVFNPPAYEQSEPPSDTNNEQADKEPDRISLHDEDTVESPWTPNTSSANNNNNNNNTVVAKR

Summary

Ontologies

Topology

Length:
299
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
38.39612
Exp number, first 60 AAs:
16.42795
Total prob of N-in:
0.74845
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  35
outside
36  -  126
TMhelix
127  -  149
inside
150  -  299
 
 

Population Genetic Test Statistics

Pi
192.284023
Theta
203.771916
Tajima's D
-0.871928
CLR
1222.480681
CSRT
0.162541872906355
Interpretation
Uncertain
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