SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07795
Annotation
NA
Location in the cell
PlasmaMembrane   Reliability : 3.131
 

Sequence

CDS
ATGATGAATGACACGGACAAATACACAATGCACGAAGTTGAGAAACGTATTGGTGTGAACAGAAAGTACAATCATTACATAAACATAACGTTAATATTATTCGTTTTTGTGCAATTACTACGAATTTCCACAGCATTTAATGTTCGCCCAACAGGGTGCACTCAAAATGAACAATGCACAGCTGGTTATTATTGTAATACATACACATATGTTTGTAATAAATGCATAAATTGTCAACAAGGACGTGAATTTGTCATGGAGAATACTACACCAAATAACAGATCAAATAATTGTACATCTTTCGGTTGTGGGCCATTGCTTCGAAGAGAAAGCAAAGCTGATCGAAGTATGGCTAATACAACAATGGACGGTTTGACACTACGAGAGCTTAATGTGTCAAAATATGTCAATCTACATGTGATCGTTTGGATTATCGCGACTTGTGCTGGCGTTGTGATTAGTTTTATTTTCTTTTGTACTTTGAGTACTATGTAG
Protein
MMNDTDKYTMHEVEKRIGVNRKYNHYINITLILFVFVQLLRISTAFNVRPTGCTQNEQCTAGYYCNTYTYVCNKCINCQQGREFVMENTTPNNRSNNCTSFGCGPLLRRESKADRSMANTTMDGLTLRELNVSKYVNLHVIVWIIATCAGVVISFIFFCTLSTM

Summary

Ontologies

Topology

Length:
164
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
42.32473
Exp number, first 60 AAs:
19.86165
Total prob of N-in:
0.96637
POSSIBLE N-term signal
sequence
inside
1  -  24
TMhelix
25  -  42
outside
43  -  139
TMhelix
140  -  162
inside
163  -  164
 
 

Population Genetic Test Statistics

Pi
186.184214
Theta
139.189814
Tajima's D
-0.77904
CLR
0.413491
CSRT
0.180190990450477
Interpretation
Uncertain
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