SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07777
Pre Gene Modal
BGIBMGA000900
Annotation
PREDICTED:_neurogenic_protein_mastermind-like_isoform_X1_[Papilio_machaon]
Location in the cell
Nuclear   Reliability : 4.033
 

Sequence

CDS
ATGATCGGACATTTAAAACTCCAACAAAAATTTGGATGTGGTGATTATGAACCTCCGGCAAAGCTTCAATGCGGGGGTGGAGGAGTCACTGGCGAGGCACTCACCAAATTCTCGGTTGAAATAGTTCAACAGCTCGAGTTCACAACTTCGGCAGCTGATTCGCAACCGCAGCAGATATCCACAAATGTCACCGTAAAGGCGCTCGCCAATGCTGTAAAGACCTCTAGCTCTCCGCCCCCGCAGCAGCCCCCGCCGCGGATCCCCACGCCCTTAGACTGCGAACGAGAGTGCAAGGCCGAATGTAAATCTGAAGTTGCAGACGATGAGTTCGTCGGGCTCGACGAGTGCGCAGCGGCTCTTGAACGCGATGCGGCTTCAGCATTCCCCGGCCTCGCAGACCTGATAGGTGAAGACGACGGCGATGATACGTTCGAGGACCTTATCACTGAAATATCCGAGTACCCTGAGTTCATGAAAGATTTCGATTTGGATGCGGGAAAATTTAATGGAGGGGGTATCGGCTTGGAGCCGCCTGAAGGGGAAACGGCCCCGAGACCGTACGGCGGGGGAGAGATGTCACCGGCAGCTCAGACTTTGAAGCACATGGCCGAGCAACACCAGCAGGCGACTGGCGGAGACTGGGCCCGCTACCGAGGCTACGGTTACCGTCCGCGACATACGCCGCCTCCCATCGATCACTTGCATATGTCGCAGCAGCAACAGTTGCATGTTACACAGCCACACCACAACCTACAGGTGTCGGCGGCGCAGCACATGCAAGTGAGCGGCGCGGGGGGCGGCGGGCACGTGTCAGTGGCTGCCCAGCAGGGCATGTACGCCAGTTTCCAGCACCAGGGCGCTCCGCCCCAGCAACACCATCAAGGTAATGGCTGCGATTCGTATTCAATGTCACAATCGCAGAGCATCAATTTCTCGCAAGCGATGAGAGCGAGGCAGCCTAGCGCCGCCCAGCAGAACTCCACGCCCGGTCCTGGCCCCACACCGCTCGGTGTAGCAGCAGCGGGTATATCGCGAGAGCAACAAGCCAAAATGCTGCAGCAACAGCAACAACAGATGCTGCGCGCCCAGCAGCAGCAGATGAGGCCGCCGCCGCCGGAATACAAGGCGCGGTACGGCGGTGTGGGTGGCGCCGTGGGGGGTTCGGTTGGGGGGCCAGTGGGGGGCGCGGTGGGGGGCATGCGTCGTGCGGCGCCGCGCCCCTACCCGCAACACCCGCGCCAGTACTCGCCCGAGTGGAGGCACGTGCTCATGCAGCAGCAAGCTGCATCCAGACAACAGTTCCCTCATCATCACCAAGGTTTCGGCATGGGCGGTGGCATGGGCGGCGGCATCACCCAGCAACAGCAGCAACAGATGCAGCTGCAGCAGGCGCGCTTGCAACAACAACAGCTCATGCAGCATCAGCAGCAGAGTCTTTTATTTGTTTTAATGTTACAATATCGTTTCAGGACTTCAAGTCAACAGTCCCCTATGTCCCATCTCATTATGCAACAAAACCAAATGATGAGCGTGCAAGGACAGATACCAAACATCCACATGAGCCAGTCTCAGAACATGTCGATGCAGCAGGGCGGGCTGGGAGGCATGGGCGGCCACCAGGGCAACCCCATGCACGCCCAGACCGGCCCCATGCCGACCTCGATGATGGCCCAGAACGGTCCCGTGCAGACGCAGGCCAACGGACCTCAACATTCGTTTCCCTCACTCCACAACACGTCTTCCTTCGCGGGACAAACTGCAGACTTCAACCTGGACTTCCTCGACAACATGCCTTCCACTGACGCGAGCAACATCACGGCCCAAGAGCTGCTCAACTCTATAGACAATTCGTTTTTGAACGACATCCTTTAA
Protein
MIGHLKLQQKFGCGDYEPPAKLQCGGGGVTGEALTKFSVEIVQQLEFTTSAADSQPQQISTNVTVKALANAVKTSSSPPPQQPPPRIPTPLDCERECKAECKSEVADDEFVGLDECAAALERDAASAFPGLADLIGEDDGDDTFEDLITEISEYPEFMKDFDLDAGKFNGGGIGLEPPEGETAPRPYGGGEMSPAAQTLKHMAEQHQQATGGDWARYRGYGYRPRHTPPPIDHLHMSQQQQLHVTQPHHNLQVSAAQHMQVSGAGGGGHVSVAAQQGMYASFQHQGAPPQQHHQGNGCDSYSMSQSQSINFSQAMRARQPSAAQQNSTPGPGPTPLGVAAAGISREQQAKMLQQQQQQMLRAQQQQMRPPPPEYKARYGGVGGAVGGSVGGPVGGAVGGMRRAAPRPYPQHPRQYSPEWRHVLMQQQAASRQQFPHHHQGFGMGGGMGGGITQQQQQQMQLQQARLQQQQLMQHQQQSLLFVLMLQYRFRTSSQQSPMSHLIMQQNQMMSVQGQIPNIHMSQSQNMSMQQGGLGGMGGHQGNPMHAQTGPMPTSMMAQNGPVQTQANGPQHSFPSLHNTSSFAGQTADFNLDFLDNMPSTDASNITAQELLNSIDNSFLNDIL

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
623
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.16469
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00211
outside
1  -  623
 
 

Population Genetic Test Statistics

Pi
204.778163
Theta
165.896587
Tajima's D
0.275802
CLR
0.185513
CSRT
0.452627368631568
Interpretation
Uncertain
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