SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07776  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001241
Annotation
heat_shock_protein_75_kDa?_mitochondrial-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.021
 

Sequence

CDS
ATGTTTGCAGTCCGTCCCAGAGTGGGAACATTCTATTTGAAAAGAATTTTATCCCGTTCAATGACTAATGTAATAATTGTAGCCCCGGGATGTGAAATGATAACCTCAAGACCAACGAATGTTTTCTTCGGATCCAAATTAAAAGAATTCCAACACTTTAGTACTGTAACTGAAAAACAAAGCAGTGAAAGCTTAAAAGGAAAGTCTGAAAAAAGAGAATTTCAAGCCGAAACGAGAATGTTGCTAGATATTGTAGCTCGATCTTTATATTCAGATAAAGAGGTATTTATTAGAGAGCTAATATCTAATGCAAGTGATGCTCTTGAAAAATTCAGATACCTGAGTGTAAGCTCAGTACCAGAGTCTGGAAACCTAAAAGAATTGGACAGACCACTTGAAATCAGATTAACAACTGACAAACAAAATCGTACAATTACATTCCAGGACTCTGGTATTGGTATGACGAAAGAAGAACTCACACAAAATTTAGGAACCATAGCACGATCTGGATCAAAGTCATTCATTGAAGAAATTAAAAAACAAGGTGCTGAACAAGCCAGCTCCATAATTGGGCAATTTGGTGTTGGATTCTATTCTGCATTTATGGTGGCTGACAAAATAGAAGTATTCACAAGAAGCAGTAAAGGCGATTCACCAGGATATCAATGGTCATCAGATGGATCTGGCACATATGAAATTCAAGAAGCTGATGGAGTTGAAATTGGCACAAAAATAGTTGTATATTTAAAAACAGACTGCAGAGAATTTGCAGATGATGATACAGTAAAAAGTATCATTAAGAAATACAGCAATTTTGTTAGCAGCCCTATTTTTTTGAACAACGACCAAGTTAATTCTATTAAGCCTTTATGGCTATTTGAACCGAAAGAAATAACTCAAGAGCAACATATTGAATTTTACAAATTCATCAGTAATTCATATGACAAACCTCGTTTCACACTTCACTACAAAACTGATGCGCCATTGAGTATAAGATCTATATTGTATGTACCAGAAGGGAAGCCTGGTCTCTTTGAGCTGTCACGTGATTCTGATGTAGGAGTGGCATTGTACTCCAGGAAGATATTGATTAAAAGCAAAGCAGAAAATATACTACCTAAATGGTTGCGATTTGTAAAAGGGGTTGTAGACTCTGAAGACATTCCGCTAAATCTCAGCAGAGAATTGTTACAAAACAGTGCGCTTATTACTAAACTGAGAACAGTCCTAACAAACCGGTTTCTGAAGTTTATGGTTGAAATGTCACAGAAAGATCCTTTGCAGTATGAGGCATTTTACAAAGACTACTCCATATTTCTGAAAGAGGGTATAGTTACAAGTCAAAGCCCATTGGAAAAGGAAGAAATTGCGAAATTATTACGATTTGAGTCATCGAAACTGAGTAATGGTCAAAGAACTTCCCTATCGGATTATAGTTCACGACAGAAAGATGATCAAAAGTCAATCTTTTATCTAGCAGCTCCTAGTCGAGAACTTGCAGAAACATCGCCATACTACGAATCACTTAAAAAACGCGACATCGAAGTATTGTTTTGCTATGAAATGTATGATGAGTTGGTGTTGTTAGAACTCAAAGAATTCGGTGGTCGAGCTTTAGTTTCAGTTGAAAACGACATGCAGAGAGATCCACTAGATAAATCGGAATCTATTATAGGCAGTGAGGGCCTGCAGCAATCTCAAGTGGATGAGTTAATCTCTTTTCTGAAAACGAACTTAACTGGGAAAGTATTTGATGTGCGCACAACGCAGAAGCTAGATTCTCATCCTTGCGTCATTGTCGTACCAGAAATGGCGGCTGCGAGACATTTCATTAGAACACAAGCTCAAAACCTCACTGAGGAGAACAGATTTGCACTTTTACGACCACAGCTAGAAATAAATGCTAAGCATCCAATTGTGAAAAAGTTACATAAACTGATGTCGACTGACAAGGAACTAGCGACCATGGTAGCTCAGCAGTTGTTCTCCAACGCCATGGTGACGGCTGGACTCGTCATGGATCCGAGAAATTTAATAACACATATAAATGATCTTCTAGTCAAGGTTTTAGAAAAACACTGA
Protein
MFAVRPRVGTFYLKRILSRSMTNVIIVAPGCEMITSRPTNVFFGSKLKEFQHFSTVTEKQSSESLKGKSEKREFQAETRMLLDIVARSLYSDKEVFIRELISNASDALEKFRYLSVSSVPESGNLKELDRPLEIRLTTDKQNRTITFQDSGIGMTKEELTQNLGTIARSGSKSFIEEIKKQGAEQASSIIGQFGVGFYSAFMVADKIEVFTRSSKGDSPGYQWSSDGSGTYEIQEADGVEIGTKIVVYLKTDCREFADDDTVKSIIKKYSNFVSSPIFLNNDQVNSIKPLWLFEPKEITQEQHIEFYKFISNSYDKPRFTLHYKTDAPLSIRSILYVPEGKPGLFELSRDSDVGVALYSRKILIKSKAENILPKWLRFVKGVVDSEDIPLNLSRELLQNSALITKLRTVLTNRFLKFMVEMSQKDPLQYEAFYKDYSIFLKEGIVTSQSPLEKEEIAKLLRFESSKLSNGQRTSLSDYSSRQKDDQKSIFYLAAPSRELAETSPYYESLKKRDIEVLFCYEMYDELVLLELKEFGGRALVSVENDMQRDPLDKSESIIGSEGLQQSQVDELISFLKTNLTGKVFDVRTTQKLDSHPCVIVVPEMAAARHFIRTQAQNLTEENRFALLRPQLEINAKHPIVKKLHKLMSTDKELATMVAQQLFSNAMVTAGLVMDPRNLITHINDLLVKVLEKH

Summary

EMBL
JQ313137    AFG30049.1    BABH01001041    RSAL01000084    RVE48415.1    KQ459606    + More
KPI91218.1    KQ460205    KPJ16848.1    NWSH01000189    PCG78603.1    AGBW02008449    OWR53364.1    ODYU01000982    SOQ36555.1    CH477190    EAT48688.1    JXUM01039146    KQ561192    KXJ79416.1    DS232119    EDS35400.1    GGFK01004751    MBW38072.1    GGFL01002538    MBW66716.1    GGFK01004763    MBW38084.1    GGFJ01002651    MBW51792.1    GGFM01001941    MBW22692.1    GGFJ01002652    MBW51793.1    GFDL01008775    JAV26270.1    APCN01003545    AAAB01008848    EAA07036.3    GGFL01002537    MBW66715.1    AXCM01001139    ADMH02000484    ETN66256.1    AXCN02001819    ATLV01027079    KE525423    KFB53829.1    GDHF01028852    JAI23462.1    GAKP01020162    JAC38790.1    GAKP01020161    JAC38791.1    GANO01002691    JAB57180.1    UFQT01000292    SSX22886.1    GBXI01005946    JAD08346.1    GAMC01003982    JAC02574.1    GGFJ01003325    MBW52466.1    KA647777    AFP62406.1    GEZM01049781    JAV75849.1    JRES01001352    KNC23389.1    GFDF01004098    JAV09986.1    NEVH01025655    PNF15137.1    GGFM01002247    MBW22998.1    AJWK01011218    GEDC01009358    JAS27940.1    BT001316    AAN71071.1    CH963846    EDW72431.1    DS235172    EEB12982.1    GECZ01016139    JAS53630.1    CM000362    CM002911    EDX05884.1    KMY91749.1    GECU01005487    JAT02220.1    CH940648    EDW60396.1    CH480816    EDW46625.1    AF115775    AAD29307.2    CM000157    EDW89056.1    AE013599    BT150318    AAF57362.1    AGB93259.1    AGW25600.1    GBYB01008276    JAG78043.1    CH902619    EDV38142.1    APGK01039339    KB740970    KB632388    ENN76640.1    ERL94369.1    GEBQ01020959    JAT19018.1    CH954177    EDV59818.2    GDIP01059044    JAM44671.1    GDIQ01235939    JAK15786.1    GDIP01225523    JAI97878.1    CM000071    EAL26542.1    GDIP01101880    JAM01835.1    GDIP01047156    LRGB01002993    JAM56559.1    KZS05193.1    CH916375    EDV98046.1    OUUW01000001    SPP73342.1    CH933808    EDW10760.1    GDIP01119584    JAL84130.1    GDIP01206116    JAJ17286.1    GDIP01104835    JAL98879.1    GDIP01189222    JAJ34180.1    CVRI01000056    CRL01686.1    GAPW01000712    JAC12886.1    CP012524    ALC42684.1    AJVK01025536    GL732547    EFX80327.1    NNAY01000312    OXU29299.1    LJIJ01000294    ODM99213.1    MH490979    AYD37992.1    KK107214    QOIP01000005    EZA55266.1    RLU22479.1    GL438929    EFN68064.1    GL888503    EGI59905.1    KQ983152    KYQ47015.1    KQ434886    KZC10076.1   
Pfam
PF00183   HSP90
Interpro
IPR020568   Ribosomal_S5_D2-typ_fold        + More
IPR003594   HATPase_C       
IPR036890   HATPase_C_sf       
IPR001404   Hsp90_fam       
IPR020575   Hsp90_N       
IPR037196   HSP90_C       
IPR001611   Leu-rich_rpt       
SUPFAM
SSF54211   SSF54211        + More
SSF110942   SSF110942       
SSF55874   SSF55874       
Gene 3D
PDB
4IYN     E-value=0,     Score=1827

Ontologies

Topology

Length:
693
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.60605
Exp number, first 60 AAs:
0.50626
Total prob of N-in:
0.02670
outside
1  -  693
 
 

Population Genetic Test Statistics

Pi
233.359365
Theta
19.699861
Tajima's D
1.024303
CLR
0
CSRT
0.671716414179291
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 LLHLLHSPPWVVFK 95.24 1e-06
28556443 GVVDSEDIPLNLSR 100.00 0.010
28556443 GVVDSEDIPLNLSR 100.00 0.010
28556443 GVVDSEDIPLNLSR 100.00 0.010
28556443 SIFYLAAPSR 100.00 0.010
28556443 TQAQNLTEENR 100.00 0.023
25044914 TITESIGR 100.00 0.032
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