SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO07775  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001242
Annotation
PREDICTED:_neurotactin_isoform_X2_[Bombyx_mori]
Full name
Neurotactin      
Location in the cell
Cytoplasmic   Reliability : 2.001
 

Sequence

CDS
ATGAGTACAACTGAAATTAATAAAATAGAGTTTGAGGATGAGAAGACGTTGGATAAAAAGGAAATTGAAGCCGAAGAGAAAGAAGTTATGCTAAAAGCCGAAAAGGAAGCGATTGATGATTTTGCGGAACTGAGAGCTGAAGCAGAAGGACCTGTAAAGGCAGCTCTTTCTGGTGATGTTACGGAACAAGGACGCGAAGTCAAGCCGAAATATATACCTATCGGGGCCATCAAAATGCCGGGATTTTTCACGAAAAGTTCTGAAAAATCGAAGGATGAAGAAGAAATTCAGAAAGAAACAGATATCTGCAAGACTGATGAAACTTCGAAACCAAAAGATGAACACAAAGAACAGCAAAAAACCAAAAGAAGTATATTTAATATCAGATATCCAAATTTTTTCAAAAAACGTTCGCCGAGTACTGCCGAGGCCACACTAGCTTCAATGGAAACTTTGGATGATAAAATGGATACATCTAATGATGGATTGGAAAATGTAAAACTGGAACCTATGGATCCTGAAGATGGCAAAGTGGCCACTAAACTTCCCTTGAAAGAAAGAATTCGACAAAAGAAATTTATCATTGACGACATTGTGGTTTGCATTGTGGCGCTCTTAGTGGCCATGTCGGTGATCATTGGAAGCTTGATTGGAGCTTGTGTCGGACCGCCAGTTGAACGACCTTTGCGTTTGGGACGTTATATCACCGCGTCTACCGGCTGCGGACCCGTGGAAGGAATATTGGATGAAGGTGTTTACAAGTTCTACAGCATTCCATATGCAGTTCCTCCAATAAAAGAGAAACGGTTTACCTACGCACAACCATTAAACAATTTATCGCTATGTTGGAATGAAACTTATCAATGCCACGTGCCTGGGCCACTCTGCGTTCAGTTTCTGGAGAACGGCACTATTACTGGCGAAGAAGACTGCCTCACGCTCGACATTATGACGCCTCACGTCAGGTACGACTCACCGTTGCCCGTAGTTGTACTCATCGGGGCTAACACACTTGCTGGCGGAATAAGCCCAGCTCAACCATCAGCTTTGTATGCTCGGACCGAGGAAGTTATTTTTGTGCGCCCCAACTTTAGACTAGGATCTTTCGGTTTTTTATCTCTCAATATACTATCCAAGTCAAAATACCCGCATACCTCTGGCAACTACGCTCTTAGCGATTTGCTGGCTGCACTTCGTTGGATCCATTTAAACATTAATCATTTTGGAGGAGATCCAGAAATGGTAACCTTACTTGGTCATCGAGCTGGAGCGACATTAACTGCCGCTTTGACGACAGTCTCCGGAGCGCACAAGCTGTACACCAGAGTTTGGCTGTCTTCACCTTCTGTAATATTTCCCGGAGAAGTTCTAGAGCAGTCTCAGAAGAACAACGAACAATTCAGGCAGATGAGTAAATGTAATGATGCGGATTGTCTGAGACGTGTGTCCAAAGAAGAGCTGTTGGCGCTCACGCCTGATACCTGGTTCGGAAATAATTTTGAGACGTTGCCCCGGACTGACGAAATTCAACGGTCTTGGTTAGTCTTGGACGGAGAGATGTTACGTATTCACGCGTACGAAAGTTGGCTCGATCAGAAGACTGCAAAACAATCTGGTAAAGTAAAAGTTTTCAAACCGATGGTCTTCACCACGACCCTGCATTCCGGCCACTCAGTTACTCTGAAAAACAAACACGTCAAGTGGACACCGGAGATCGTAGAAAAAATCGTTAACGACAGCGTCATCGGGGAGAAGAACTTGACCGCCGCCGTATTCACACATTTTAATAAGACTTACGAGGGTCTAGTAGAACTGATTTCGTCTGTCCGAACTCTGTGCCCGCTGGTGAGCCTGGCGCGGCTGCGGCTGTCGGTCCCGCTGTACGTAGTGCGGGGCGCGAGGCGGGGGGCGGAGGGGTCGCCTGGGCTGGCCGACGTCAACGCGGACGTCAAAGCAATTCTCGGTACTTTTGATTCCGAGATGCCCGAACAGCGTAGATTCATGGCAGTCATCCAACACCTGTTCTACCATTACGTCGGGCACGGCAAGCTGTCCGGTCCCGAGCCGGGCCTCGTTGCGATTGGCCAGGACCTGCTTCCTCAGCCCAGCCTTCCCGCGTGCGATCTACTCATCCGAGAGGACATCGTCCCGCGATACGCTCACGTCGATTAG
Protein
MSTTEINKIEFEDEKTLDKKEIEAEEKEVMLKAEKEAIDDFAELRAEAEGPVKAALSGDVTEQGREVKPKYIPIGAIKMPGFFTKSSEKSKDEEEIQKETDICKTDETSKPKDEHKEQQKTKRSIFNIRYPNFFKKRSPSTAEATLASMETLDDKMDTSNDGLENVKLEPMDPEDGKVATKLPLKERIRQKKFIIDDIVVCIVALLVAMSVIIGSLIGACVGPPVERPLRLGRYITASTGCGPVEGILDEGVYKFYSIPYAVPPIKEKRFTYAQPLNNLSLCWNETYQCHVPGPLCVQFLENGTITGEEDCLTLDIMTPHVRYDSPLPVVVLIGANTLAGGISPAQPSALYARTEEVIFVRPNFRLGSFGFLSLNILSKSKYPHTSGNYALSDLLAALRWIHLNINHFGGDPEMVTLLGHRAGATLTAALTTVSGAHKLYTRVWLSSPSVIFPGEVLEQSQKNNEQFRQMSKCNDADCLRRVSKEELLALTPDTWFGNNFETLPRTDEIQRSWLVLDGEMLRIHAYESWLDQKTAKQSGKVKVFKPMVFTTTLHSGHSVTLKNKHVKWTPEIVEKIVNDSVIGEKNLTAAVFTHFNKTYEGLVELISSVRTLCPLVSLARLRLSVPLYVVRGARRGAEGSPGLADVNADVKAILGTFDSEMPEQRRFMAVIQHLFYHYVGHGKLSGPEPGLVAIGQDLLPQPSLPACDLLIREDIVPRYAHVD

Summary

Description
May mediate or modulate cell adhesion between embryonic cells during development.
Similarity
In the C-terminal section; belongs to the type-B carboxylesterase/lipase family.
Keywords
Cell adhesion   Complete proteome   Disulfide bond   Glycoprotein   Membrane   Phosphoprotein   Reference proteome   Signal-anchor   Transmembrane   Transmembrane helix  
Feature
chain  Neurotactin
EMBL
BABH01001041    NWSH01000189    PCG78604.1    KP308208    ALH43426.1    RSAL01000084    + More
RVE48414.1    ODYU01000982    SOQ36556.1    KQ459606    KPI91217.1    KY021879    AQY62768.1    JTDY01001519    KOB73668.1    KQ460205    KPJ16846.1    DS232013    EDS31874.1    JRES01001646    KNC21219.1    CH477568    EAT38911.1    GAMC01002372    JAC04184.1    JXUM01051274    JXUM01051275    KQ561682    KXJ77811.1    JXUM01012574    KQ560357    KXJ82854.1    GDHF01030899    GDHF01020574    GDHF01002575    JAI21415.1    JAI31740.1    JAI49739.1    KJ702193    AID61347.1    GAKP01016318    JAC42634.1    GBXI01009547    GBXI01000780    JAD04745.1    JAD13512.1    JXJN01024608    CH940647    EDW69362.1    KRF84338.1    KRF84339.1    KQ971338    EFA02046.2    CH964095    EDW79332.1    CH379070    EAL30327.1    UFQS01001976    UFQT01001976    SSX12833.1    SSX32275.1    ATLV01024095    KE525349    KFB50608.1    SSX12832.1    SSX32274.1    AAAB01008960    EAA11248.4    AXCM01005329    OUUW01000012    SPP87555.1    UFQT01000574    SSX25409.1    AXCN02000363    CH902618    KPU78575.1    CH933809    EDW18698.1    KRG06320.1    ADMH02001299    ETN63093.1    CCAG010022573    CCAG010022574    CCAG010022575    CCAG010022576    CCAG010022577    CCAG010022578    CH916366    EDV96394.1    EDV40437.1    KPU78576.1    CH480815    EDW41804.1    CM000159    EDW94800.1    CM002912    KMZ00104.1    AE014296    ADV37557.1    X54999    X53837    AF132188    CH954178    EDV52041.1    CP012525    ALC44908.1    KQ434931    KZC11828.1    KQ414631    KOC67241.1    KQ763581    OAD54934.1    KZ288288    PBC29316.1    QOIP01000001    RLU26523.1    LBMM01010484    KMQ87431.1    KQ981215    KYN44610.1    ADTU01027829    ADTU01027830    KQ976565    KYM80445.1    GL888237    EGI64155.1    KQ979074    KYN22697.1    KQ982706    KYQ51834.1    GEBQ01004461    JAT35516.1    LJIG01022487    KRT80320.1    GBYB01012270    GBYB01012433    GBYB01012512    JAG82037.1    JAG82200.1    JAG82279.1    NEVH01006721    PNF37125.1    CVRI01000063    CRL04436.1    KK107154    EZA56832.1    KK852637    KDR19688.1    GL448433    EFN84654.1    NNAY01000773    OXU26595.1    KQ435689    KOX81251.1    DS235053    EEB11036.1    PYGN01000901    PSN39532.1    KQ977063    KYN06008.1   
Pfam
PF00135   COesterase        + More
PF00232   Glyco_hydro_1
Interpro
IPR029058   AB_hydrolase        + More
IPR002018   CarbesteraseB       
IPR019819   Carboxylesterase_B_CS       
IPR018120   Glyco_hydro_1_AS       
IPR033132   Glyco_hydro_1_N_CS       
IPR017853   Glycoside_hydrolase_SF       
IPR001360   Glyco_hydro_1       
SUPFAM
SSF53474   SSF53474        + More
SSF51445   SSF51445       
Gene 3D
PDB
1C7I     E-value=3.86416e-20,     Score=244

Ontologies

Topology

Subcellular location
Membrane  
Length:
723
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.82201
Exp number, first 60 AAs:
0
Total prob of N-in:
0.99634
inside
1  -  198
TMhelix
199  -  221
outside
222  -  723
 
 

Population Genetic Test Statistics

Pi
204.869806
Theta
176.42035
Tajima's D
0.419864
CLR
0.684586
CSRT
0.489475526223689
Interpretation
Uncertain
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