Gene

KWMTBOMO07772  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001243

Annotation

ribosomal_protein_S10_[Bombyx_mori]

Location

Bomo_Chr13(-):6593721-6595732      View in EpiBrowser

Full name

40S ribosomal protein S10       + More
40S ribosomal protein S10b      

Location in the cell

Cytoplasmic   Reliability : 1.942 Mitochondrial   Reliability : 1.92

CDS

ATGTTGATGCCCAAACAAAACCGTGTTGCTATTTATGAGTACCTCTTTAAAGAGGGAGTCATGGTGGCCAAAAAAGACTATCATGCACCGAAGCATACTGAACTAGAGAAGATTCCTAACCTCCAAGTTATCAAAGCTATGCAATCACTCAAGTCCAGAGGTTATGTCAAAGAACAGTTTGCCTGGAGGCACTTTTACTGGTACCTAACCAATGAGGGTATTGAATACTTGAGAATATTCTTGCACCTTCCTCCTGAAATTGTGCCTGCAACACTTAAGCGCTCAGTACGTACAGAGACAGTACGCCGTGGCCCTGTTGGTCGTCCTGATGCCCCAGCCCGCTCTGCTGAGGACAGATCTGCATACAGACGTACTCCTGCTGCCCCTGGTGTTGCACCTCATGATAAAAAGGCTGATGTTGGTCCAGGCTCAGCTGATCTTGAATTTAAGGGAGGCTATGGACGTGGCAGGCCTGCTTCATAA

Protein

MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHTELEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVRTETVRRGPVGRPDAPARSAEDRSAYRRTPAAPGVAPHDKKADVGPGSADLEFKGGYGRGRPAS

Similarity

Belongs to the eukaryotic ribosomal protein eS10 family.

Keywords

Cytoplasm   Ribonucleoprotein   Ribosomal protein   Complete proteome   Reference proteome  

Feature

chain  40S ribosomal protein S10

Uniprot

Q5UAN4   H9IVG3   D1LYQ8   A0A3G1T1M0   S4PBB2   A0A194RG98   + More
I4DIM1   A0A2H1V6U7   Q962R9   I4DMC5   E7DZ52   A0A2A4JHR2   A0A212FI05   Q5MGM0   A7KCY7   G0ZEH1   A0A1E1W3Y5   A0A194PEU2   A0A0L7KNM3   A2IAD6   Q6EUZ6   V5G8N7   D1M831   Q4GXT1   D2A360   Q56FF9   A0A1B1ZGH0   A0A1Y1K1J2   A0A0L7RIL9   A0A0M9A5Y0   A0A151IQ96   A0A195FES7   A0A151XD37   Q4GXS9   A0A232EVN5   A0A195DWY1   A0A195B7E1   A0A158NGX1   Q6EUZ4   K7IZL3   F4WZU5   Q6EUZ5   V9IFV9   A0A088AHT2   A0A0C9QMC3   A0A2A3EA23   A2I3Y9   A0A154PS66   A0A240SYN0   A0A1B0GLM3   A0A1L8E3A7   U5EUI2   E9ITT7   A0A1L8E394   A0A0J7K5Z5   A0A026W9V6   E2BVL8   A0A1B0CJS2   E2B1C9   B7ZWP7   D4G7H1   C0H6Z8   M9NEQ9   Q9VWG3   T1PFK3   B4R7R9   B4I775   A0A1I8P6M1   A0A1L8EHC6   Q29IV5   W8CBA8   A0A3B0KAS4   A0A034VLR1   B4PZG3   A0A0A1XPI9   B4NDM2   A0A0R1EHM5   B3NVQ0   A0A0C9RB89   A0A1B6IRS6   A0A0L0BT67   B3MQA2   A0A2C9NEF3   A0A1A9Y8N9   A0A1A9ZBC6   B4L809   A0A1W4VU69   B4MAS4   A0A1B6KIU3   A0A109NIA2   T1D546   B4JME5   A0A0U2UPU2   A0A084VFR4   R4V0G7   A0A087UYA3   A0A023FWR8   A0A067QVN3   A0A0C9S0V6   A0A1D1YH56  

Pubmed

19121390    23622113    26354079    22651552    14668217    22118469    + More
16023793    17603110    26227816    17437641    18362917    19820115    27464714    28004739    28648823    21347285    20075255    21719571    21282665    24508170    30249741    20798317    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25315136    17994087    15632085    24495485    25348373    17550304    25830018    18057021    26108605    24330624    26621068    24438588    24845553    26131772   

EMBL

AY769324    AAV34866.1    BABH01001043    GU084332    ACY95365.1    MG992442    + More
AXY94880.1    GAIX01005997    JAA86563.1    KQ460205    KPJ16843.1    AK401139    BAM17761.1    ODYU01000982    SOQ36558.1    AF400207    AK402443    BAM19065.1    HQ424755    ADT80699.1    NWSH01001481    PCG71124.1    AGBW02008449    OWR53360.1    AY829766    AAV91380.1    EF207982    ABS57455.1    JF265049    AEL28880.1    GDQN01009392    JAT81662.1    KQ459606    KPI91214.1    JTDY01007873    KOB64892.1    EF179450    ABM55456.1    AJ783875    CAH04323.1    GALX01001996    JAB66470.1    GU120455    ACY71305.1    AM048942    CAJ17179.1    KQ971338    EFA02264.1    AY961541    AAX62443.1    KU756281    ANX99824.1    GEZM01098160    JAV53970.1    KQ414583    KOC70710.1    KQ435727    KOX77900.1    KQ976780    KYN08328.1    KQ981625    KYN39180.1    KQ982294    KYQ58275.1    AM048944    CAJ17181.1    NNAY01001980    OXU22385.1    KQ980204    KYN17227.1    KQ976574    KYM80167.1    ADTU01015300    AJ783877    CAH04325.1    GL888480    EGI60370.1    AJ783876    CAH04324.1    JR045461    AEY59983.1    GBYB01004669    JAG74436.1    KZ288310    PBC28577.1    EF070492    ABM55558.1    KQ435119    KZC14749.1    AJVK01027443    AJWK01033653    GFDF01000877    JAV13207.1    GANO01001458    JAB58413.1    GL765695    EFZ16016.1    GFDF01000874    JAV13210.1    LBMM01013371    KMQ85669.1    KK107314    QOIP01000012    EZA52830.1    RLU15866.1    GL450875    EFN80288.1    AJWK01014905    GL444841    EFN60529.1    BT050589    ACJ49254.1    BT122123    ADE06729.1    BT058104    ACN09817.1    AE014298    AFH07470.1    AHN59915.1    AY070896    KA647454    AFP62083.1    CM000366    EDX18402.1    CH480823    EDW56173.1    GFDG01000708    JAV18091.1    CH379063    EAL32548.2    GAMC01000629    JAC05927.1    OUUW01000034    SPP89822.1    GAKP01014706    JAC44246.1    CM000162    EDX02119.1    GBXI01001356    JAD12936.1    CH964239    EDW81844.1    KRK06570.1    CH954180    EDV46715.1    KQS30097.1    GBYB01013749    JAG83516.1    GECU01018088    JAS89618.1    JRES01001383    KNC23242.1    CH902621    EDV44528.1    CCAG010013939    CH933814    EDW05584.1    CH940655    EDW66333.1    GEBQ01028632    JAT11345.1    KC507307    AHB12430.1    GALA01000688    JAA94164.1    CH916371    EDV92470.1    KT755156    ALS04990.1    ATLV01012458    KE524793    KFB36808.1    KC632273    AGM32087.1    KK122254    KFM82342.1    GBBL01002180    JAC25140.1    KK853320    KDR08546.1    GBZX01002386    JAG90354.1    GDJX01013967    JAT53969.1   

Proteomes

UP000005204    UP000053240    UP000218220    UP000007151    UP000053268    UP000037510    + More
UP000007266    UP000053825    UP000053105    UP000078542    UP000078541    UP000075809    UP000215335    UP000078492    UP000078540    UP000005205    UP000002358    UP000007755    UP000005203    UP000242457    UP000076502    UP000092462    UP000092461    UP000036403    UP000053097    UP000279307    UP000008237    UP000000311    UP000000803    UP000095301    UP000000304    UP000001292    UP000095300    UP000001819    UP000268350    UP000002282    UP000007798    UP000008711    UP000037069    UP000007801    UP000092444    UP000092443    UP000092445    UP000009192    UP000192221    UP000008792    UP000001070    UP000030765    UP000054359    UP000027135   

PRIDE

Q5UAN4    H9IVG3    Q962R9    A0A088AHT2    B7ZWP7    D4G7H1    + More
C0H6Z8    Q9VWG3   

Pfam

PF03501   S10_plectin

Interpro

IPR005326   S10_plectin_N        + More
IPR036388   WH-like_DNA-bd_sf       
IPR037447   Rps10       

Gene 3D

1.10.10.10    

ProteinModelPortal

Q5UAN4   H9IVG3   D1LYQ8   A0A3G1T1M0   S4PBB2   A0A194RG98   + More
I4DIM1   A0A2H1V6U7   Q962R9   I4DMC5   E7DZ52   A0A2A4JHR2   A0A212FI05   Q5MGM0   A7KCY7   G0ZEH1   A0A1E1W3Y5   A0A194PEU2   A0A0L7KNM3   A2IAD6   Q6EUZ6   V5G8N7   D1M831   Q4GXT1   D2A360   Q56FF9   A0A1B1ZGH0   A0A1Y1K1J2   A0A0L7RIL9   A0A0M9A5Y0   A0A151IQ96   A0A195FES7   A0A151XD37   Q4GXS9   A0A232EVN5   A0A195DWY1   A0A195B7E1   A0A158NGX1   Q6EUZ4   K7IZL3   F4WZU5   Q6EUZ5   V9IFV9   A0A088AHT2   A0A0C9QMC3   A0A2A3EA23   A2I3Y9   A0A154PS66   A0A240SYN0   A0A1B0GLM3   A0A1L8E3A7   U5EUI2   E9ITT7   A0A1L8E394   A0A0J7K5Z5   A0A026W9V6   E2BVL8   A0A1B0CJS2   E2B1C9   B7ZWP7   D4G7H1   C0H6Z8   M9NEQ9   Q9VWG3   T1PFK3   B4R7R9   B4I775   A0A1I8P6M1   A0A1L8EHC6   Q29IV5   W8CBA8   A0A3B0KAS4   A0A034VLR1   B4PZG3   A0A0A1XPI9   B4NDM2   A0A0R1EHM5   B3NVQ0   A0A0C9RB89   A0A1B6IRS6   A0A0L0BT67   B3MQA2   A0A2C9NEF3   A0A1A9Y8N9   A0A1A9ZBC6   B4L809   A0A1W4VU69   B4MAS4   A0A1B6KIU3   A0A109NIA2   T1D546   B4JME5   A0A0U2UPU2   A0A084VFR4   R4V0G7   A0A087UYA3   A0A023FWR8   A0A067QVN3   A0A0C9S0V6   A0A1D1YH56  

PDB

4V6W     E-value=1.83933e-47,     Score=472

KEGG

693068    K02947 small subunit ribosomal protein S10e | (RefSeq) RpS10; ribosomal protein S10

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0022627   GO:0003735   GO:0000028   GO:0002181   GO:0005634   GO:0022626  

PANTHER

PTHR12146  

Subcellular location

Cytoplasm  

Length:

160

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01657

Exp number, first 60 AAs:

0.00029

Total prob of N-in:

0.22135

outside

1  -  160

 

 

Pi

237.370416

Theta

210.266516

Tajima's D

0.312028

CLR

0

CSRT

0.456227188640568

Interpretation

Uncertain